Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0035
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 94 8e-20
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 93 1e-19
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 79 3e-15
02_03_0246 - 16807619-16808145,16808208-16808868 33 0.16
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 31 0.63
07_03_0833 - 21844123-21844929 30 1.1
01_06_1501 + 37804029-37804600,37804626-37805388 30 1.1
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 30 1.5
04_03_0728 + 19065819-19065868,19067002-19067080,19067544-190676... 29 1.9
02_02_0442 - 10318576-10319109 29 1.9
05_03_0157 - 9027777-9027862,9028142-9029357 29 2.6
04_01_0075 - 838358-838945,847120-847282,847581-847687 29 2.6
03_01_0028 - 274231-275424 29 2.6
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522... 29 2.6
01_01_1219 + 9858375-9858483,9859184-9859506 29 2.6
05_06_0060 - 25266735-25267210,25267323-25267569,25267650-252683... 28 4.5
05_01_0594 - 5337804-5337976,5338282-5338436,5338591-5338745,533... 28 4.5
04_03_0941 - 20950190-20951088,20952436-20952478,20952580-209526... 28 4.5
07_03_0117 + 13589997-13590998 28 5.9
06_03_0969 - 26413534-26413594,26415020-26415318 28 5.9
12_01_0963 + 9608858-9609538 27 7.8
08_01_0056 + 379270-379803 27 7.8
04_04_1114 + 30995816-30996229,30997054-30997129,30997493-309975... 27 7.8
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 93.9 bits (223), Expect = 8e-20
Identities = 42/85 (49%), Positives = 59/85 (69%)
Frame = +2
Query: 257 IVNIDAHDLAKGKPHLVLGLLWQIIRIGLFNQITLEHCPGLTELLNDQERIEDLLALSPE 436
+VNI DLA+G+PHL+LGL+ QII+I L + L+ P L EL+ D + +E+L++LSPE
Sbjct: 245 VVNIGTQDLAEGRPHLILGLISQIIKIQLLADVNLKSTPQLVELVEDSKEMEELMSLSPE 304
Query: 437 AILLRWVNHQLQSAGVTRRCANFQT 511
ILLRW+N QL+ G R NF +
Sbjct: 305 KILLRWMNFQLKKGGFQRTVTNFSS 329
Score = 65.7 bits (153), Expect = 2e-11
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 TSLADRSRSKQLYEKLKDGLILCKVINHPCPDTIDERAIN-KKNLTLYTKHENLTLALVS 236
T+L + L+ KDG++LCK+IN P TIDERAIN KK L L+ K+EN TL L S
Sbjct: 178 TALPIDPATDHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNS 237
Query: 237 SQAIGC 254
++AIGC
Sbjct: 238 AKAIGC 243
Score = 31.5 bits (68), Expect = 0.48
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 257 IVNIDAHDLAKGKPHLVLGLLWQIIRIGL 343
+VNI +D+ +G L+L LWQ++R +
Sbjct: 505 LVNIAGNDIVQGNKKLILAFLWQLMRYNI 533
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 1 EQMAFSGWINSNLEHDPDLKHLLPIDP 81
E+ ++ G IN+ L DP L LPIDP
Sbjct: 158 EKASYVGHINAYLAEDPFLNTALPIDP 184
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +2
Query: 257 IVNIDAHDLAKGKPHLVLGLLWQIIRIGLFNQITLEHCPGLTELLNDQERIEDLLALSPE 436
+VNI DL +G+PHL+LGL+ QII+I L + L+ P L EL +D + I+++L+LSPE
Sbjct: 218 VVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELFDDSKDIDEVLSLSPE 277
Query: 437 AILLRWVNHQLQSAGVTRRCANFQT 511
+LLRW+NH L+ AG + +NF T
Sbjct: 278 KMLLRWMNHHLKKAGYKKTVSNFST 302
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 QLYEKLKDGLILCKVINHPCPDTIDERAINKKN-LTLYTKHENLTLALVSSQAIGC 254
QL++ ++DG++LCK+IN P TIDERAINKK L + ++EN TL L S++AIGC
Sbjct: 161 QLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIGC 216
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/84 (26%), Positives = 46/84 (54%)
Frame = +2
Query: 257 IVNIDAHDLAKGKPHLVLGLLWQIIRIGLFNQITLEHCPGLTELLNDQERIEDLLALSPE 436
+VN+ +D+ +G L++ LLWQ++R FN + L L L + + + +
Sbjct: 478 LVNLAGNDIVQGNKKLIVALLWQLMR---FNMLQL-----LNRLRSHSQGSQG--KEITD 527
Query: 437 AILLRWVNHQLQSAGVTRRCANFQ 508
A +L+W N +++++G T + +F+
Sbjct: 528 ADILKWANSKVKASGRTSQMESFK 551
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 1 EQMAFSGWINSNLEHDPDLKHLLPIDP 81
E+ ++ IN+ L DP LK LPI+P
Sbjct: 131 EKSSYVAHINTYLREDPFLKKYLPIEP 157
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 511 DVADSEIYSYLLKQIAP 561
DV D E Y+YLLK +AP
Sbjct: 303 DVKDGEAYAYLLKALAP 319
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 78.6 bits (185), Expect = 3e-15
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Frame = +2
Query: 146 VPGH-DRRASDQQEEPDVIHETRELDSGAGLLAGHRVYIVNIDAHDLAKGKPHLVLGLLW 322
VPG D RA + +++P+ +VNI DL + +PHLVLGLL
Sbjct: 177 VPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIGCTVVNIGTQDLIEARPHLVLGLLS 236
Query: 323 QIIRIGLFNQITLEHCPGLTELLND--QERIEDLLALSPEAILLRWVNHQLQSAGVTRRC 496
QII+I L + L+ P L EL+ D + E+L+ L+P+ +LL+W+N L+ AG +
Sbjct: 237 QIIKIQLLADLNLKKTPQLAELVADDNSKEAEELVTLAPDKMLLKWMNFHLKKAGYKKTV 296
Query: 497 ANFQT 511
NF T
Sbjct: 297 TNFST 301
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 SKQLYEKLKDGLILCKVINHPCPDTIDERAIN-KKNLTLYTKHENLTLALVSSQAIGC 254
+ ++ ++DG++LCK+IN P TIDERAIN KK+ + ++EN TL L S++AIGC
Sbjct: 156 TNDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIGC 213
Score = 35.5 bits (78), Expect = 0.029
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 176 QQEEPDVIHETRELDSGAGLLA-GHRVY--IVNIDAHDLAKGKPHLVLGLLWQIIRIGL 343
Q +P +I R++++G ++ G + +VNI +D+ +G L+L LWQ++R +
Sbjct: 445 QASKPPIIMPFRKVENGNQVIEIGKELKFSVVNISGNDIVQGNKKLILAFLWQLMRTSI 503
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 378 SRNC*MTRNASRICWLCPRRPSCCAG-STTSCSPPASRGAAP 500
SR+C +R A+R CW C RP CC G + SP AS P
Sbjct: 99 SRSCRSSRMAAR-CWPC--RPPCCCGRRRRAASPSASPCTTP 137
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 63 SLADRSRSKQLYEKLKDGLILCKVINHPCPDTI 161
SL +R ++ L++GL+LC V+NH P +
Sbjct: 43 SLPERPSEEEFCVALRNGLVLCNVLNHVNPGAV 75
>07_03_0833 - 21844123-21844929
Length = 268
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 343 LQPDNAGALPRTHGIAE*PGTHRGSVG-SVPGGHPAALGQPPAAVRRRHAALRQLPDD 513
L+P +A L + G GSV S+P +P G PP+A AA R++ DD
Sbjct: 80 LRPGDAVILLHVRPTSVLYGADWGSVDLSLPAANPNPSGDPPSAEDDAEAAARKMEDD 137
>01_06_1501 + 37804029-37804600,37804626-37805388
Length = 444
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 438 PSCCAGSTTSCSPPASRGAAPTS 506
P C + T+CSPPA AAP S
Sbjct: 15 PVSCHDAATACSPPAEAAAAPPS 37
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 54 PQTSLADRSRSKQLYEKLKDGLILCKVINHPCPDTIDERAINKKNLTLYTKHENLTLALV 233
P+ L S +L E L DG +LC ++N P ++E + + H LA+V
Sbjct: 29 PEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEESWGAYASSDQHAGHVKKFLAVV 88
Query: 234 SSQAI 248
+ +
Sbjct: 89 ADMGL 93
>04_03_0728 +
19065819-19065868,19067002-19067080,19067544-19067611,
19067695-19067794,19068396-19068431,19068601-19068675,
19068878-19068946,19069047-19069247
Length = 225
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 442 DGLRGQS-QQILDAFLVIQQFRESGAVLQRYLVEETNSDDLPQETEHQMR 296
DGL G + QQ L F + ++FR++ AV ++ ET S+ ++H+ +
Sbjct: 113 DGLTGSNIQQAL--FCITEKFRDAQAVQKKPATAETESNSTEMPSDHEKK 160
>02_02_0442 - 10318576-10319109
Length = 177
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 430 PGGHPAALGQPPAAVRRRHAALRQLPDDVADSEIYSYLL 546
P AA+G+PPAA RRH R P +E S ++
Sbjct: 119 PEPSTAAVGEPPAAAHRRHQGGRWRPRPEVRAEAASVMV 157
>05_03_0157 - 9027777-9027862,9028142-9029357
Length = 433
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 152 GHDRRASDQQEEPDVIHETRELDSGAGLLAGHRVYIVNIDAHD--LAKGKPHL 304
G R A QEEP V+ D G G HRV + + HD L K P +
Sbjct: 291 GRLRYAEVSQEEPYVLSSFALDDDGGGWTLEHRVALSRLWPHDQNLCKNTPQI 343
>04_01_0075 - 838358-838945,847120-847282,847581-847687
Length = 285
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 288 LARS*ASMLTMYTRWPARRPAPESSSRVSCITSGSSC 178
+ R+ A +M + W PAP S+S S +SG SC
Sbjct: 245 VGRALAIARSMTSSWKVGSPAPTSASSTSWSSSGGSC 281
>03_01_0028 - 274231-275424
Length = 397
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 140 SPVPGHDRRASDQQEEPDVIHETRELDSGAGLLAGHRVYIVNI 268
SP+ D D +P +I + +E D G L H +VN+
Sbjct: 284 SPLAAADLSTMDSHSQPQLIGDWKEFDPPKGWLESHDPQLVNL 326
>01_03_0175 +
13450869-13451013,13451293-13451372,13451417-13452240,
13452287-13452638
Length = 466
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2
Query: 219 SSSRVSCITSGSSC*SLARLSCPGTGDLLLCI 124
SSS ++ I S SS SLARL P D LLC+
Sbjct: 355 SSSTIAAIVSPSS--SLARLRAPLVHDALLCV 384
>01_01_1219 + 9858375-9858483,9859184-9859506
Length = 143
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 RWRFLVGSTVT*NTIQTSNISCRSIPKQAALRKTQRRTYSMQSNKSPVPGHDRRASDQQE 184
R R L S +TI + C+++ Q+ L + + + + S G + +DQ E
Sbjct: 21 RARALPASANVASTIPAPRLQCKNLSSQSPLNASFTKKRLVSVHASAEAGAEEAGTDQPE 80
Query: 185 E--PDVIHETRELDSGAGLLAGHR 250
E P V ET L++ ++ R
Sbjct: 81 EPKPTVSIETMPLETKQKMIMEQR 104
>05_06_0060 -
25266735-25267210,25267323-25267569,25267650-25268345,
25268457-25268709,25268786-25269261,25270760-25270909
Length = 765
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 435 RPSCCAGSTTSCSPPASRGAAP 500
RP+ G TT PP+SR AAP
Sbjct: 46 RPTAMVGPTTQPPPPSSRHAAP 67
>05_01_0594 -
5337804-5337976,5338282-5338436,5338591-5338745,
5338864-5338992,5339096-5339189,5339293-5339366,
5339716-5339851,5341546-5341562
Length = 310
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 191 DVIHETRELDSGAGLLAGHRVYIVNIDAHDLAKGKPHL 304
DVI + L G+L GH Y +++ H LA GK +L
Sbjct: 162 DVIFGSEILPGLLGILVGHTYYFLSV-LHPLATGKNYL 198
>04_03_0941 -
20950190-20951088,20952436-20952478,20952580-20952606,
20953189-20953301,20953872-20954715,20955740-20955790,
20956026-20956126,20956205-20956244,20956360-20957124
Length = 960
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 423 LCPRRPSCCAGSTTSCSPPASRGAAP 500
L P+ C + SC P S+GAAP
Sbjct: 228 LVPQNEGCTSNKPESCVVPVSKGAAP 253
>07_03_0117 + 13589997-13590998
Length = 333
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 505 EVGAAPRDAGGLQLVVDPAQQDGLRG 428
+VGAAPR AG +Q++ + + +G+ G
Sbjct: 70 QVGAAPRGAGAVQMLREIGRGEGVAG 95
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +1
Query: 382 GIAE*PGTHRGSVGSVPGGHPAALGQPPAAVRRRHAALR 498
G A PG G+V ++ GG AA G P AA RRR A R
Sbjct: 7 GDAAPPGD--GAV-ALAGGDEAAQGSPAAAARRRSRAAR 42
>12_01_0963 + 9608858-9609538
Length = 226
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 430 PGGHPAALGQPPAAVRRRHAALRQLP 507
P AA+ +PPAA RRH R+ P
Sbjct: 168 PEPSTAAVAEPPAAAHRRHQGGRRRP 193
>08_01_0056 + 379270-379803
Length = 177
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 430 PGGHPAALGQPPAAVRRRHAALRQLP 507
P AA+ +PPAA RRH R+ P
Sbjct: 119 PEPSTAAVAEPPAAAHRRHQGGRRRP 144
>04_04_1114 +
30995816-30996229,30997054-30997129,30997493-30997587,
30997729-30997812,30998094-30998181,30998485-30998609,
30998687-30998785,31000089-31000190,31001570-31001680
Length = 397
Score = 27.5 bits (58), Expect = 7.8
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 320 WQIIRIGLFNQITLEHCPGLTELLNDQERIEDLLALSPEAILLRW-VNHQ--LQSAGVT- 487
WQ +R G + + L + G T L RIE +L P + RW +H L S +T
Sbjct: 281 WQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLP--LTARWQYDHALILSSQCLTG 338
Query: 488 -RRCANF-QTTWPTP 526
R+ +NF WP P
Sbjct: 339 WRQISNFSDCKWPHP 353
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,987,742
Number of Sequences: 37544
Number of extensions: 345413
Number of successful extensions: 1480
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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