Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0034
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   1.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.9  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   3.9  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.0  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   9.0  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -1

Query: 620 HRFYQRVLSKIFAFRLEEEYRRNPFNIVSFFEWQYYSYMKLSLNFFSPFSISLISRTPAS 441
           HR Y R   + ++ RL+  +R +P    SF  WQ+   ++   N   P  + L SRT ++
Sbjct: 373 HRLYNRARFEAYSSRLQSRFRSDP---ASF--WQFVR-IRRGCNTL-PNEMVLDSRTAST 425

Query: 440 SNEI 429
             EI
Sbjct: 426 PVEI 429


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +1

Query: 280  GDKLYNFDFKTDVRGNLIPKPASLVASVTYANS 378
            G   ++FD++ D+  +  P PA ++ ++T +N+
Sbjct: 1644 GVDYFSFDYQPDLSQHPGPSPAIILQALTMSNA 1676


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = +3

Query: 132  LLRSNTKLKYATRTSKSKSSAMRVNWNSNLRIKVKVKTLKIIHP*ELPRWRQVIQFRLQD 311
            LL+S  K       +K  +SA++ +WN          TL   HP       QVI  R + 
Sbjct: 1010 LLQSQEKWSRIAEAAKQITSALQRDWNEERARLAVSSTLSPSHPVGPSDRNQVIAARRER 1069

Query: 312  *RPRQLDPEA 341
               R+ +  A
Sbjct: 1070 RNARRRERRA 1079


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 679 PSLRLFLPFTSILYRSALICTDST 608
           P +++FLPF    YR   + T +T
Sbjct: 530 PDVKIFLPFRFYFYRVEELFTPNT 553


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 679 PSLRLFLPFTSILYR 635
           P +++FLPF   LYR
Sbjct: 530 PDVKIFLPFRFYLYR 544


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,641
Number of Sequences: 2352
Number of extensions: 13653
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)