Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0033
         (693 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CFB39 Cluster: hypothetical protein TTHERM_0047...    35   2.2  
UniRef50_Q54N52 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_Q99166 Cluster: Protein xpaR7; n=1; Bacillus lichenifor...    33   8.8  

>UniRef50_UPI00006CFB39 Cluster: hypothetical protein
           TTHERM_00471930; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00471930 - Tetrahymena
           thermophila SB210
          Length = 820

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = -2

Query: 683 DYLSHVRPQLHSSCDVINRYV--LN--YVFTNFEFCYRTLKIITKLSQVI*FKFTKTSHI 516
           ++L+ ++ Q+H S + IN YV  LN  YVF  F+F         +  ++    F  T++ 
Sbjct: 460 EFLNFLKKQMHKSANFINEYVFYLNEMYVFAEFQFSKNPNTFENEFYEICYHLFESTTNT 519

Query: 515 NVSFLSGKKS 486
            +S L  K++
Sbjct: 520 KLSLLYSKQN 529


>UniRef50_Q54N52 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1677

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
 Frame = -3

Query: 298 IDNTNKSVSSLLRLAHKVSRARRLFN--RERKLTNFLIKLSELTKILRLIFTVTIIQPRR 125
           ID  N + +++     KV   ++LF   +ER   + L K+ E+ K++  IF +TI +P++
Sbjct: 813 IDKNNNNNNNIKIEIQKVIYIQKLFGIFKERSNISKLFKVEEIEKLIDFIFNITIQKPKQ 872

Query: 124 K 122
           +
Sbjct: 873 Q 873


>UniRef50_Q99166 Cluster: Protein xpaR7; n=1; Bacillus
           licheniformis|Rep: Protein xpaR7 - Bacillus
           licheniformis
          Length = 91

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 671 HVRPQLHSSCDVINRYVLNYVFTNFEFCYRT 579
           H++ +   + D+  +Y   Y+ TNF FCY T
Sbjct: 36  HLQTEKRGTADIFRQYECRYIKTNFPFCYCT 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,178,217
Number of Sequences: 1657284
Number of extensions: 7831124
Number of successful extensions: 18095
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18087
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)