Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0033
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -3

Query: 337 QIRNY--YVNYLLIIIDNTNKSVSSLLRLAHKVSRARRLFNRERKLTNFLIKLSELTKIL 164
           Q R+Y  +  +L  II     + +S+L + + V      F +E+++   LIKLSE+ +  
Sbjct: 66  QFRSYSNFSVFLFDIITIVTLTSTSILLIVNAV------FVKEKRIRTLLIKLSEIKENT 119

Query: 163 RL 158
           RL
Sbjct: 120 RL 121


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 528 LSKFELDYLTQFCNYF*SPIAKFKICKHIIQHIPVYDVT 644
           +S FE +Y+T FC+ F   I K  + K+  Q + +  +T
Sbjct: 43  VSDFE-NYVTFFCSLFIVVILKLILAKYRQQDVTLLQIT 80


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -2

Query: 278 CLVATPISTQSFQSTSLIQSREKTN*LSNKAFRIN*NFETHIYSYNNTTKTKEFLKVSYK 99
           CL A  +   SF+  S   ++EKT   S K   I  + +  +  +  TT  K+ L+   K
Sbjct: 299 CLRAIVLFKTSFEKPSSSSNQEKTTTESAKISVIQDDAQMRLNKHVTTTYPKQPLRFG-K 357

Query: 98  IFIFRACTY 72
           I +  + T+
Sbjct: 358 ILLLVSSTF 366


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/38 (21%), Positives = 21/38 (55%)
 Frame = -2

Query: 638 VINRYVLNYVFTNFEFCYRTLKIITKLSQVI*FKFTKT 525
           V+ +YV+     NF    R++  ++++  ++  K+ +T
Sbjct: 359 VLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRET 396



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 118 FLK*VTKYLYSEHVLTEVLQIYFRMKIIIYRKSF*YLE 5
           F+  V+ +LY      ++L IY    +II    F YLE
Sbjct: 53  FVSFVSYWLYLVLEADDMLPIYKNTYLIILFADFAYLE 90


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 29  IYYYFHSEIYLQYLSKY 79
           +Y  FHS + L  LS+Y
Sbjct: 145 LYNCFHSTLLLMILSRY 161


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 118 FLK*VTKYLYSEHVLTEVLQIYFRMKIIIYRKSF*YLE 5
           F+  V+ +LY      ++L IY    +II    F YLE
Sbjct: 71  FVSFVSYWLYLVLEADDMLPIYKNTYLIILFADFAYLE 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,849
Number of Sequences: 336
Number of extensions: 2313
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)