Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0033
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0795 + 25287449-25287967,25288078-25288138,25288640-252887...    28   6.1  
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675...    28   8.1  

>01_05_0795 +
           25287449-25287967,25288078-25288138,25288640-25288734,
           25288827-25288939,25289480-25289648,25289777-25289816,
           25289906-25289970,25290150-25290263,25290398-25290462,
           25290572-25290725,25290798-25290914,25292489-25292545
          Length = 522

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 540 ELDYLTQFCNYF*SPIAKFKICKHIIQHIP 629
           +L+Y  Q C    SP+  +  C+H I H+P
Sbjct: 459 KLEYANQLCGNMPSPVGSYVDCRH-IGHLP 487


>08_02_0167 -
           13564466-13566227,13566361-13566644,13566684-13567540,
           13567684-13567957,13567973-13568218
          Length = 1140

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 410 ETI*AIATEKSPKSFTQIKTIINLQYFFYR 499
           ET+ A+   K PKS TQ+++ + L  ++ R
Sbjct: 487 ETVTAVTDLKQPKSVTQVRSFLGLAGYYRR 516


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,274,279
Number of Sequences: 37544
Number of extensions: 176567
Number of successful extensions: 356
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)