Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0031
(687 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E2487B Cluster: PREDICTED: flotillin 2 isoform 3... 65 1e-09
UniRef50_Q14254 Cluster: Flotillin-2; n=66; Eumetazoa|Rep: Floti... 65 1e-09
UniRef50_Q4SUY2 Cluster: Chromosome undetermined SCAF13836, whol... 65 2e-09
UniRef50_A7SF44 Cluster: Predicted protein; n=1; Nematostella ve... 57 4e-07
UniRef50_Q5C3F9 Cluster: SJCHGC03797 protein; n=1; Schistosoma j... 55 2e-06
UniRef50_Q1EZZ0 Cluster: Band 7 protein:Flotillin; n=2; Clostrid... 48 2e-04
UniRef50_UPI00015B63FC Cluster: PREDICTED: similar to ENSANGP000... 46 0.001
UniRef50_O13127 Cluster: Flotillin-1; n=33; Euteleostomi|Rep: Fl... 44 0.003
UniRef50_O75955 Cluster: Flotillin-1; n=37; Eumetazoa|Rep: Floti... 44 0.005
UniRef50_A5CSU8 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_A1GA48 Cluster: Band 7 protein precursor; n=1; Salinisp... 42 0.011
UniRef50_Q7XZ63 Cluster: Flotillin-1; n=1; Griffithsia japonica|... 41 0.033
UniRef50_UPI00006A0CD3 Cluster: Flotillin-1.; n=1; Xenopus tropi... 39 0.13
UniRef50_O32076 Cluster: Uncharacterized protein yuaG; n=23; Fir... 38 0.23
UniRef50_Q67KD6 Cluster: Flottilin; n=3; Bacteria|Rep: Flottilin... 38 0.30
UniRef50_Q036H0 Cluster: Membrane protease subunit, stomatin/pro... 36 0.93
UniRef50_A6W9V0 Cluster: Band 7 protein precursor; n=2; Actinomy... 36 0.93
UniRef50_Q9K771 Cluster: Epidermal surface antigen; n=3; Bacilla... 36 1.2
UniRef50_Q5KCF6 Cluster: Putative uncharacterized protein; n=2; ... 35 1.6
UniRef50_Q1D4U8 Cluster: Putative uncharacterized protein; n=2; ... 34 2.8
UniRef50_A3QU13 Cluster: Putative serine protease; n=1; Oryctes ... 34 3.7
UniRef50_Q5UYQ4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_UPI0000F2C8A1 Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_A5TWU7 Cluster: Flotillin family protein; n=1; Fusobact... 33 6.5
UniRef50_UPI0000D9B0A6 Cluster: PREDICTED: hypothetical protein;... 33 8.6
>UniRef50_UPI0000E2487B Cluster: PREDICTED: flotillin 2 isoform 3;
n=2; Pan troglodytes|Rep: PREDICTED: flotillin 2 isoform
3 - Pan troglodytes
Length = 405
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/61 (55%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = +3
Query: 6 MALVLEALPKIAAEVSAPLAKTDEI-VLVGDNG-TTGDVARLASGIPPALKTLTGLDLTQ 179
MALVLEALP+IAA+++APL K DEI VL GDN T +V RL + +P ++ LTG+DL++
Sbjct: 334 MALVLEALPQIAAKIAAPLTKVDEIVVLSGDNSKVTSEVNRLLAELPASVHALTGVDLSK 393
Query: 180 V 182
+
Sbjct: 394 I 394
>UniRef50_Q14254 Cluster: Flotillin-2; n=66; Eumetazoa|Rep:
Flotillin-2 - Homo sapiens (Human)
Length = 379
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/61 (55%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Frame = +3
Query: 6 MALVLEALPKIAAEVSAPLAKTDEI-VLVGDNG-TTGDVARLASGIPPALKTLTGLDLTQ 179
MALVLEALP+IAA+++APL K DEI VL GDN T +V RL + +P ++ LTG+DL++
Sbjct: 308 MALVLEALPQIAAKIAAPLTKVDEIVVLSGDNSKVTSEVNRLLAELPASVHALTGVDLSK 367
Query: 180 V 182
+
Sbjct: 368 I 368
>UniRef50_Q4SUY2 Cluster: Chromosome undetermined SCAF13836, whole
genome shotgun sequence; n=6; Euteleostomi|Rep:
Chromosome undetermined SCAF13836, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 435
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/60 (53%), Positives = 49/60 (81%), Gaps = 2/60 (3%)
Frame = +3
Query: 9 ALVLEALPKIAAEVSAPLAKTDEIVLVGDNGT--TGDVARLASGIPPALKTLTGLDLTQV 182
ALVLEALPKIA++V+APL+KT+EIV++ G+ TG+V RL + +P ++ LTG+DL+++
Sbjct: 369 ALVLEALPKIASKVAAPLSKTNEIVILSGKGSQVTGEVNRLLAELPASVGALTGVDLSKL 428
>UniRef50_A7SF44 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 457
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/52 (50%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = +3
Query: 27 LPKIAAEVSAPLAKTDEIVLVGDNG--TTGDVARLASGIPPALKTLTGLDLT 176
L ++AAEV+APLAKT EIV++ D+G +G++++L +PPA++ LTG DL+
Sbjct: 382 LSEVAAEVAAPLAKTGEIVIINDDGNSVSGELSKLLGQLPPAVQALTGTDLS 433
>UniRef50_Q5C3F9 Cluster: SJCHGC03797 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03797 protein - Schistosoma
japonicum (Blood fluke)
Length = 125
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 11/75 (14%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVLV-GDNGTTG----------DVARLASGIPPAL 149
I+ L+L LP+IAAEVSAPL+KT EIV++ G NG + D L +P A+
Sbjct: 43 ILHLILNTLPQIAAEVSAPLSKTKEIVIMNGSNGESASLQSLSNLGKDFTTLVGTVPHAI 102
Query: 150 KTLTGLDLTQVLKRL 194
+ LT +DL+Q + R+
Sbjct: 103 RALTSVDLSQSISRI 117
>UniRef50_Q1EZZ0 Cluster: Band 7 protein:Flotillin; n=2;
Clostridium|Rep: Band 7 protein:Flotillin - Clostridium
oremlandii OhILAs
Length = 475
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVLVGDNGTTGDVARLASG--------IPPALKTL 158
I +++E LP+IA V+ PL+KT++IV+V G A SG +P + L
Sbjct: 389 ITQMIIEKLPEIAKAVADPLSKTEKIVIVDSGSGAGKGAAKVSGYVTDIIASLPETVNAL 448
Query: 159 TGLDLTQVLK 188
TG+DL Q+LK
Sbjct: 449 TGVDLKQILK 458
>UniRef50_UPI00015B63FC Cluster: PREDICTED: similar to
ENSANGP00000009431; n=2; Apocrita|Rep: PREDICTED:
similar to ENSANGP00000009431 - Nasonia vitripennis
Length = 433
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Frame = +3
Query: 12 LVLEALPKIAAEVSAPLAKTDEIVLVGD-NGTTG------DVARLASGIPPALKTLTGLD 170
++L+ LPK+AAEV+APL++ +I +V NG G +V + S +P +K +TG+D
Sbjct: 364 MMLDTLPKVAAEVAAPLSQAKKITMVSSGNGAIGAEKLTEEVLNIVSRVPELVKNMTGVD 423
Query: 171 LTQ 179
+ +
Sbjct: 424 VAK 426
>UniRef50_O13127 Cluster: Flotillin-1; n=33; Euteleostomi|Rep:
Flotillin-1 - Carassius auratus (Goldfish)
Length = 423
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Frame = +3
Query: 12 LVLEALPKIAAEVSAPLAKTDEIVLVGDNGT-------TGDVARLASGIPPALKTLTGLD 170
+++E LP IA E+S PL+ T+++ +V G+ TG+V + + +P ++ LTG+
Sbjct: 356 MLMEKLPLIAEEISKPLSATNKVTMVSSGGSEIGAAKLTGEVLDIMTKLPETIEKLTGVS 415
Query: 171 LTQVLK 188
++QV +
Sbjct: 416 ISQVAR 421
>UniRef50_O75955 Cluster: Flotillin-1; n=37; Eumetazoa|Rep:
Flotillin-1 - Homo sapiens (Human)
Length = 427
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Frame = +3
Query: 12 LVLEALPKIAAEVSAPLAKTDEIVLVGD-NGT------TGDVARLASGIPPALKTLTGLD 170
++LE LP++A E+S PL ++I LV +GT TG+V + + +P +++ LTG+
Sbjct: 356 MLLEKLPQVAEEISGPLTSANKITLVSSGSGTMGAAKVTGEVLDILTRLPESVERLTGVS 415
Query: 171 LTQV 182
++QV
Sbjct: 416 ISQV 419
>UniRef50_A5CSU8 Cluster: Putative uncharacterized protein; n=1;
Clavibacter michiganensis subsp. michiganensis NCPPB
382|Rep: Putative uncharacterized protein - Clavibacter
michiganensis subsp. michiganensis (strain NCPPB 382)
Length = 486
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVLV---GDNGTTGDVARLASGIPPALKTLTGLDL 173
+ A ++ ++P+IA E++APLA D + ++ G N VA + +P LK TG+D+
Sbjct: 386 LQARIIASMPEIAREMAAPLANVDNMTIISADGANALNRSVAENMATLPKLLKDTTGIDV 445
Query: 174 TQVLKRLHPTGGEETNLAAAAT 239
L + T+ +A+
Sbjct: 446 ATALSSFLGSTAAGTSAGGSAS 467
>UniRef50_A1GA48 Cluster: Band 7 protein precursor; n=1; Salinispora
arenicola CNS205|Rep: Band 7 protein precursor -
Salinispora arenicola CNS205
Length = 459
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVLVGDNGTTGDVARLASGIPPALK---TLTGLDL 173
++ L+++ LPK+ SAP+ D++ ++ +G + +A + L+ LTG+DL
Sbjct: 373 VLDLLVKVLPKVVEAASAPIGAIDKMTVISTDGASSLTKSVAGNVAQGLQLGSDLTGIDL 432
Query: 174 TQVLKRLHPTGGEE 215
+L RL + G E
Sbjct: 433 AGLLTRLAASTGSE 446
>UniRef50_Q7XZ63 Cluster: Flotillin-1; n=1; Griffithsia
japonica|Rep: Flotillin-1 - Griffithsia japonica (Red
alga)
Length = 168
Score = 40.7 bits (91), Expect = 0.033
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVLVGDNGTTG------DVARLASGIPPALKTLTG 164
I+ ++ LP +A ++ PL+KT+++V V G +++ + + +P ++ LTG
Sbjct: 84 IVEKLITVLPDVARAIAEPLSKTEKMVFVSSGNGGGPSQFLKEMSTVMAEVPVTVEALTG 143
Query: 165 LDLTQVLKRL 194
+DL Q L RL
Sbjct: 144 VDLGQALSRL 153
>UniRef50_UPI00006A0CD3 Cluster: Flotillin-1.; n=1; Xenopus
tropicalis|Rep: Flotillin-1. - Xenopus tropicalis
Length = 414
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVLVGDNGT-------TGDVARLASGIPPALKTLT 161
I+ ++LE LP++A +S P+ + +I ++ G+ TG+V + + +P ++ LT
Sbjct: 339 IVDMLLEKLPEVAEAISKPMTEVKKIKMISSGGSEVGASKITGEVLDILNRLPDTVEKLT 398
Query: 162 GLDLTQ 179
G+++ Q
Sbjct: 399 GININQ 404
>UniRef50_O32076 Cluster: Uncharacterized protein yuaG; n=23;
Firmicutes|Rep: Uncharacterized protein yuaG - Bacillus
subtilis
Length = 509
Score = 37.9 bits (84), Expect = 0.23
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVLV---------GDNGTTGDVARLASGIPPALKT 155
I ++++ LP+ A + +APL+ D+I +V G N T L S + +LK
Sbjct: 410 IFDMIVKMLPEYAKQAAAPLSNIDKITVVDTGGSGESSGANKVTSYATNLMSSLQESLKA 469
Query: 156 LTGLDLTQVLKRLHPTGGEETNLAAAATKKKE 251
+G+D+ ++L+ G + ++ + KE
Sbjct: 470 SSGIDVKEMLENFSGKGNVKQSINELTNEIKE 501
>UniRef50_Q67KD6 Cluster: Flottilin; n=3; Bacteria|Rep: Flottilin -
Symbiobacterium thermophilum
Length = 515
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVL--------VGDNGTTGDVARLASGIPPALKTL 158
I+ ++ LP++ + PL++ D++ + VG N DVA+L + P L+ L
Sbjct: 396 ILDKLMPVLPELMRAAAEPLSRIDKVTILSQGQGAEVGVNKFMADVAKLVATAPTVLEGL 455
Query: 159 TGLDLTQVLKRL 194
TG+ + +++K+L
Sbjct: 456 TGISIQEMMKQL 467
>UniRef50_Q036H0 Cluster: Membrane protease subunit,
stomatin/prohibitin family; n=1; Lactobacillus casei
ATCC 334|Rep: Membrane protease subunit,
stomatin/prohibitin family - Lactobacillus casei (strain
ATCC 334)
Length = 505
Score = 35.9 bits (79), Expect = 0.93
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 12 LVLEALPKIAAEVSAPLAKTDEIVLVGDNGTTGDVARLASGIPPALKTLTGLDLTQVLK- 188
+ +EA+PKI +P A D I L GD TG + L+ + G+D+ +L
Sbjct: 392 MTIEAMPKIIEAAMSPYANVDSIKLYGDGDLTGQTSGSLVKQLDMLQEVAGIDIRGMLNG 451
Query: 189 -RLHPTGGE 212
+H G +
Sbjct: 452 ALMHQAGNQ 460
>UniRef50_A6W9V0 Cluster: Band 7 protein precursor; n=2;
Actinomycetales|Rep: Band 7 protein precursor -
Kineococcus radiotolerans SRS30216
Length = 513
Score = 35.9 bits (79), Expect = 0.93
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +3
Query: 18 LEALPKIAAEVSAPLAKTDEIVLVGDNGTTGDVARLASGIP---PALKTLTGLDLTQVLK 188
LE LP++A +++P+A ++ ++ ++G + + + LK TG+D+T++L+
Sbjct: 415 LEVLPQVAQALASPIAGIKDLTVISNDGAGALSRSVGANMQETFEVLKRTTGIDVTELLR 474
Query: 189 RLHPTGGEET 218
+ T G T
Sbjct: 475 TVGATPGGAT 484
>UniRef50_Q9K771 Cluster: Epidermal surface antigen; n=3;
Bacillaceae|Rep: Epidermal surface antigen - Bacillus
halodurans
Length = 518
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 3 IMALVLEALPKIAAEVSAPLAKTDEIVLV---GDNGTTG---DVARLASGIPPALKTLTG 164
I+ ++E LP+ A +S PL+ + + ++ NG + + + I LK LTG
Sbjct: 402 IIEKLIEMLPQFAESISKPLSNIESVKIIDTGNGNGVSSYSKSITNTMAQIQEPLKELTG 461
Query: 165 LDLTQVLKRLHPTGGEET 218
LD++++L L G T
Sbjct: 462 LDVSKLLTDLVNRGNTHT 479
>UniRef50_Q5KCF6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 638
Score = 35.1 bits (77), Expect = 1.6
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = -3
Query: 193 KRFSTCVRSKPVRVFRAGGIPLARRATSPVVPLSPTRTISSVFANGADTSAAIFGSASRT 14
KR ST + + + R PL+ ATSP V P +T +SV A+ T A + S T
Sbjct: 318 KRASTPASAVSMTIGRRSITPLS--ATSPTVTAHPIKTAASVTAHATKTGAPVTASTIST 375
Query: 13 RA 8
RA
Sbjct: 376 RA 377
>UniRef50_Q1D4U8 Cluster: Putative uncharacterized protein; n=2;
Cystobacterineae|Rep: Putative uncharacterized protein -
Myxococcus xanthus (strain DK 1622)
Length = 377
Score = 34.3 bits (75), Expect = 2.8
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = -3
Query: 241 LVAAAARFVSSPPVGCKRFSTCVRSKPVR--VFRAGGIPLARRATSPVVPLSPTRTISSV 68
+ AA V +PP GC F +R V A +PL A +VPLSP+ + ++
Sbjct: 1 MTTAAPNAVPAPPPGCP-FDAEFLPPNLRKHVDPAAPVPLRMMAAKSLVPLSPSDMVGAL 59
Query: 67 FANGADTSAAIFGSASRTRA 8
+ D A + +A++T A
Sbjct: 60 YMLTFDPDANVRETAAKTAA 79
>UniRef50_A3QU13 Cluster: Putative serine protease; n=1; Oryctes
rhinoceros virus|Rep: Putative serine protease - Oryctes
rhinoceros virus
Length = 339
Score = 33.9 bits (74), Expect = 3.7
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Frame = -2
Query: 251 FLLLGCGSCKVRLFSA-GRVQTFQHLCQV*AGESLQGRRDPARE------TSHVSGGSVV 93
FL+ G C +R+FSA GR F ++C+V +G L + + S+VS V
Sbjct: 258 FLIYGTKVCNMRMFSATGRTNEFTNVCRVESGAPLSYHENFGIKPQLLGLASYVSELGCV 317
Query: 92 SYQD---YLVRLR*WSR 51
Y D YL R R W R
Sbjct: 318 GYPDGYVYLWRYRSWIR 334
>UniRef50_Q5UYQ4 Cluster: Putative uncharacterized protein; n=1;
Haloarcula marismortui|Rep: Putative uncharacterized
protein - Haloarcula marismortui (Halobacterium
marismortui)
Length = 316
Score = 33.9 bits (74), Expect = 3.7
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 69 TDEIVLVGDNGTTGDVARLASGIPPALKTLTGLDLTQVLKRL-HPTGGEETNLAAAATK 242
TDE + D GT G L S P A+ LD++ R+ H G EET+ AT+
Sbjct: 44 TDEDAMTNDGGTVGTFRLLISDQPAAIGDFDSLDVSFSRARIFHAKGDEETDEGDDATE 102
>UniRef50_UPI0000F2C8A1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 159
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -1
Query: 147 GPAGSRSRDEPRLRWFRCLLPGLSRPSSLMEPTLLPRSLAALRERGP 7
GP G R R L + LPG +RP P PR AA RGP
Sbjct: 67 GPPGPRRRPPALLSPAQLALPGPARPGMPPRPPARPRPTAAAVSRGP 113
>UniRef50_A5TWU7 Cluster: Flotillin family protein; n=1;
Fusobacterium nucleatum subsp. polymorphum ATCC
10953|Rep: Flotillin family protein - Fusobacterium
nucleatum subsp. polymorphum ATCC 10953
Length = 500
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 6 MALVLEALPKIAAEVSAPLAKTDEIVLVGDNGTTGDVARLASGIPPALKTLT---GLDLT 176
+ + ALP +A ++ PL+K I + G+ TT ++ + + LK T G+D
Sbjct: 412 LEMYYNALPLVAKNLAEPLSKIGNITMYGEGNTTKFMSEMTQNLDKVLKAATDGLGIDAK 471
Query: 177 QVL 185
+L
Sbjct: 472 ALL 474
>UniRef50_UPI0000D9B0A6 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 192
Score = 32.7 bits (71), Expect = 8.6
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = -3
Query: 238 VAAAARFVSSPPVGCKRFSTCVRSKPVRVFRAGGIPLARRATSPVVPLSPTRT 80
V AAA SP G K S C RS+ + A G P A T PV LSP R+
Sbjct: 69 VPAAAGQGPSPGPGLKPGSWCPRSRSL----ASGSPTASERTQPVQSLSPARS 117
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,192,266
Number of Sequences: 1657284
Number of extensions: 12020609
Number of successful extensions: 31347
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 30383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31324
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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