Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0031
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +3

Query: 27  LPKIAAEVSAPLAKTDEIVLVGDNGTTGDVARLASGIPPALKTLTGLDLTQ 179
           +P +++     L  TDE+ +  D G   D  R +  +     +L  +DLT+
Sbjct: 1   MPHVSSSGGDDLGSTDEVKVFKDEGDGEDEKRSSENLTEEKSSL--IDLTE 49


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 532 MTSFAVFLSILEFIVLYIFTT 594
           +TSF+V LS+  FIV    TT
Sbjct: 37  LTSFSVVLSLGSFIVSVYLTT 57


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 280 RLQHYNSLCAIHQHTKK 330
           +L   N +CA+H H  K
Sbjct: 498 QLNTLNKICALHHHLSK 514


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 280 RLQHYNSLCAIHQHTKK 330
           +L   N +CA+H H  K
Sbjct: 223 QLNTLNKICALHHHLSK 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,935
Number of Sequences: 336
Number of extensions: 3046
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)