Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0031
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.1  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   4.8  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   4.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.3  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 2   YYGPRSRSAAKDRGRSVGSI 61
           Y+ P  R  AKD G S GS+
Sbjct: 421 YFMPIGRPRAKDYGHSSGSV 440


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 199 GCKRFSTCVRSKPVRVFRAGG 137
           GC+ FSTC  S P   F + G
Sbjct: 113 GCRNFSTC-SSHPTAAFISYG 132


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 199 GCKRFSTCVRSKPVRVFRAGG 137
           GC+ FSTC  S P   F + G
Sbjct: 112 GCRNFSTC-SSHPTAAFISYG 131


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = +2

Query: 44  RSVGSISEDGRDSPGXXXXXXXXXXXXXXXDPAGPEDSHRLRPDTGAETFAPDRRRRDE 220
           RSV  + EDG+  P                D  GPE     R  +G    A  ++R DE
Sbjct: 248 RSVDQVLEDGKLKPNKKVRISNEMSKVKVIDMTGPEQ----RILSGYHAIAGGQQRPDE 302


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/22 (27%), Positives = 17/22 (77%)
 Frame = -2

Query: 77  LVRLR*WSRHFCRDLWQRFENE 12
           L+ ++  + HF +D++++++NE
Sbjct: 49  LILVKKSTAHFVKDIYEKYKNE 70


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 248 GSLAF*THLSPDFSTTIAYVPYINIPKKHLV 340
           GSL   T  +P  + ++ Y  Y+N  + H V
Sbjct: 669 GSLGKLTETNPKLARSVLYKIYLNTMESHEV 699


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 562 VYLKTQQMTSFVSIPQACLYAPMT 491
           VY   QQ T FV+IP+     P+T
Sbjct: 64  VYNTEQQSTVFVAIPRIQDGVPLT 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,620
Number of Sequences: 438
Number of extensions: 3450
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)