Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0029
(740 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_2140| Best HMM Match : DUF1154 (HMM E-Value=1) 36 0.026
SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09) 35 0.060
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 33 0.18
SB_30628| Best HMM Match : Alpha-2-MRAP_N (HMM E-Value=1.2) 33 0.32
SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) 32 0.56
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 31 0.74
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 31 0.74
SB_22540| Best HMM Match : Glyco_transf_54 (HMM E-Value=0) 31 0.74
SB_21610| Best HMM Match : HSF_DNA-bind (HMM E-Value=0.32) 31 0.74
SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 31 1.3
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 30 1.7
SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 30 1.7
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 30 1.7
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 30 2.3
SB_22161| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 29 3.0
SB_52664| Best HMM Match : Filament (HMM E-Value=0.3) 29 3.0
SB_37103| Best HMM Match : DUF164 (HMM E-Value=0.26) 29 3.0
SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 5.2
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098) 29 5.2
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 5.2
SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_39939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_51946| Best HMM Match : PhyH (HMM E-Value=0.0025) 28 6.9
SB_50977| Best HMM Match : DUF1409 (HMM E-Value=0.91) 28 6.9
SB_23768| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-07) 28 6.9
SB_11778| Best HMM Match : DUF1409 (HMM E-Value=0.91) 28 6.9
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 28 6.9
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 28 9.1
SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19) 28 9.1
>SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/75 (40%), Positives = 50/75 (66%)
Frame = +2
Query: 239 ENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLE 418
+N NKELE L+ E+QA + E+L+KQ LREVN++RL+ +EQ+E++ +L+
Sbjct: 301 KNLLERNKELEILLKSSHQFSEEQALKNEFLSKQLETLREVNENRLKAFEQMEMTAMELQ 360
Query: 419 RANHRLAVDHAADKK 463
+AN +L + ++ KK
Sbjct: 361 KANMKLQNETSSMKK 375
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 207 LDDLQLAAELGKTLLEATRNSRQPFASIKMLLKIKHKKS 323
L+DL+LAAE+GK LLE RN +++LLK H+ S
Sbjct: 290 LEDLELAAEIGKNLLE--RNK-----ELEILLKSSHQFS 321
>SB_2140| Best HMM Match : DUF1154 (HMM E-Value=1)
Length = 155
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +2
Query: 125 RSNGSGEEEIRWKRRVGARRYHLTSLYARRFATGGRTRENPTRSNKELETALRQHQ---- 292
R + E + +W+RR ++ + A G + +E NKEL+ ++HQ
Sbjct: 57 RETVASEMDYKWQRRENELKHE--HKMSTEEALGQQRKELIHEKNKELDGLNKEHQRQIE 114
Query: 293 NVIEDQAQEIEYLTKQTVALRE 358
++E +EI+ +TK+ +L+E
Sbjct: 115 TIVEQHGKEIDVMTKENASLKE 136
>SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)
Length = 712
Score = 35.1 bits (77), Expect = 0.060
Identities = 21/73 (28%), Positives = 41/73 (56%)
Frame = +2
Query: 260 KELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLA 439
K + ++Q ++ + A++I+ L + L++ N+S R E +DLER+N R+A
Sbjct: 621 KHAKMVIQQLKDQELEMAKQIDELEQHIETLKQQNNSLQRNNSSFEGEKRDLERSNVRIA 680
Query: 440 VDHAADKKHIKSL 478
D +A K+ ++ L
Sbjct: 681 KDVSALKRTLERL 693
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +2
Query: 251 RSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANH 430
R E+ +A+ + V+ED+ +IE+ L E + + + L DL+ ANH
Sbjct: 1754 RELMEIRSAIEGLERVLEDKDSQIEWYRNSNKTLEEDIAALRKKFGNLRAEHDDLQHANH 1813
Query: 431 RLAVDHAADKKHIKSLCSNIDTVEAKAKNYKR 526
L + + L ++T EA KN R
Sbjct: 1814 GLILQGQELESKAADLEHRLET-EANDKNKLR 1844
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 290 QNVIEDQAQEIEYLTKQTVALREVNDSRLRIYE-QLELSIQDLERANHRLAVDHAADKKH 466
+N I+ QA ++E L + + L+ ++ QLE I DLE AN RL D K
Sbjct: 1248 KNEIQSQANKLERL-EADFKKSQKRILELQYHQGQLERKITDLETANERLKNDKKDLKAD 1306
Query: 467 IKSLCSNIDTVEAKAK 514
+ + + I +E K +
Sbjct: 1307 LIAANATITDLELKTE 1322
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +2
Query: 239 ENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLE 418
EN R E++ + +E + + I+ L + L E NDS E L+ S +DLE
Sbjct: 721 ENLKRELGEVKRTAENLRKDLEGRDEVIKQLRPKVKELLEENDSLKVELESLKQSYEDLE 780
Query: 419 RANHRLAVDHAADKKHIKSL 478
+ + + +K +K L
Sbjct: 781 EQYRVVEDKYLSAQKELKVL 800
>SB_30628| Best HMM Match : Alpha-2-MRAP_N (HMM E-Value=1.2)
Length = 172
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2
Query: 254 SNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLER 421
S K LE+ALR+ ++ Q +EIE+L K+ LR D +R YE + +D+E+
Sbjct: 101 SVKLLESALRERNKQMDIQRREIEFLRKE---LRR-KDEVIREYENIIKEREDMEK 152
>SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 263 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ-DLER 421
E+E L++ +ED EI T +T +LRE ++R ++ ++L ++ DLE+
Sbjct: 163 EIEKQLKEVNKSVEDLKIEIAQRTVETKSLREELENRQKLVDELHKEVEGDLEK 216
>SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)
Length = 520
Score = 31.9 bits (69), Expect = 0.56
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Frame = +2
Query: 191 LTSLYARRFATGGRTRENPTRSNKELETALRQHQ-----NVIEDQAQEIEYLTKQTVALR 355
+ L A AT R E R + L L + Q V+E Q ++ E ++ AL+
Sbjct: 101 VAKLMANVAATNKRLLEEANRQSLILHERLAKRQAMAQHRVMEKQEEKDELDNRKMKALK 160
Query: 356 EVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKAKN 517
+ +++ + ++ +D A HRL V+H K+ + C + + E + N
Sbjct: 161 NLEANQM--ISEGTMTAEDFLEAYHRLVVEHQLAKEEQEDRCDDEEFQEIDSLN 212
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 31.5 bits (68), Expect = 0.74
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Frame = +2
Query: 143 EEEIRWKRRVGARRYHLTSLYARRFAT----GGRTRENPTRSNK--ELETALRQHQNVIE 304
EE+IR + A L L A R + G+ + + K LET LR+ Q
Sbjct: 7 EEKIRLHKASEANEKRLLELEAERELSLEENSGKRKLADSNEAKIASLETTLRRTQEHEN 66
Query: 305 DQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCS 484
QE+ K+ AL S + L+ + Q E +L D+ +K + +
Sbjct: 67 QVRQELYNTHKRLTALEHEQASNKERQKSLQDAYQSAEEKALKLKEDYMISQKKLSETEA 126
Query: 485 NIDTVEAK 508
N++ + K
Sbjct: 127 NLENAQQK 134
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 31.5 bits (68), Expect = 0.74
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Frame = +2
Query: 143 EEEIRWKRRVGARRYHLTSLYARRFAT----GGRTRENPTRSNK--ELETALRQHQNVIE 304
EE+IR + A L L A R + G+ + + K LET LR+ Q
Sbjct: 2535 EEKIRLHKASEANEKRLLELEAERELSLEENSGKRKLADSNEAKIASLETTLRRTQEHEN 2594
Query: 305 DQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCS 484
QE+ K+ AL S + L+ + Q E +L D+ +K + +
Sbjct: 2595 QVRQELYNTHKRLTALEHEQASNKERQKSLQDAYQSAEEKALKLKEDYMISQKKLSETEA 2654
Query: 485 NIDTVEAK 508
N++ + K
Sbjct: 2655 NLENAQQK 2662
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +2
Query: 182 RYHLTSLYARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVAL-RE 358
R H + ++R A +E KE++ +LR+ Q D EY K+ VAL ++
Sbjct: 1392 RDHENKMLSKRVADLTALKEKFEHEKKEMKQSLREAQGRESDLEVRYEYEVKEKVALQQQ 1451
Query: 359 VNDSRLRIYEQLE--LSIQDLERANHRLAVD 445
++D+ R E L ++ L RLA+D
Sbjct: 1452 LDDTTNRSNADREKFLKLEQL-LIEERLAMD 1481
>SB_22540| Best HMM Match : Glyco_transf_54 (HMM E-Value=0)
Length = 352
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 308 QAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSN 487
Q E YL AL + D + + + + + DL+ +NH + KK K L S
Sbjct: 91 QRSEASYLMDTLQALIDGLDENDKKHVMVVVFVADLDNSNHAAKMSQQLSKKFSKELDSG 150
Query: 488 -IDTVEAKAKNYKRL 529
I V A A Y +L
Sbjct: 151 LIQAVTAPASYYPKL 165
>SB_21610| Best HMM Match : HSF_DNA-bind (HMM E-Value=0.32)
Length = 425
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 242 NPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLER 421
NP + +ELE ++ H+ E QE E L ++ L E R ++LE + L+R
Sbjct: 243 NPEKKIQELENTIKHHEEKTEVSDQEKEKLRERIALLEEAISHRQDKIQRLEENGSTLDR 302
>SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 31.1 bits (67), Expect = 0.98
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +2
Query: 269 ETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDH 448
+++ R+ Q A+E + AL E N + + + LE ++ R N+RL+VDH
Sbjct: 1064 QSSAREMQRQAAKSAEEAGKYKVELSALGEDNTTLRQRIQTLESELKRYRRENNRLSVDH 1123
Query: 449 AADKKHIKSL 478
+ +K L
Sbjct: 1124 TNLQMSLKKL 1133
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +2
Query: 263 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAV 442
ELE +RQ Q ++ Q + E L + L+E + + S+ E+ L
Sbjct: 1736 ELEGQIRQLQQILRQQKEAEEELVARIGKLQEEKRELQERLAKFQRSVAAAEQEKRELER 1795
Query: 443 DHAADKKHIKSLCSNIDTVE 502
H +K K+L + +D +E
Sbjct: 1796 AHVRLEKDKKALRNTLDKIE 1815
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/89 (19%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 227 GRTRENPTRSNKELETALRQHQNVIEDQAQEI-----EYLTKQTVALREVNDSRLRIYEQ 391
G+ ++ PT +EL RQ +++++Q+ EY++ + ++ + + + ++
Sbjct: 101 GKKKDEPTEKEEELRKE-RQENEWLQEESQQTRLESHEYMSYMSKKTQKRQTTIISLSDR 159
Query: 392 LELSIQDLERANHRLAVDHAADKKHIKSL 478
+ +QD+ +L +D+ K+ +K L
Sbjct: 160 NQKELQDITDQKEQLLLDYDQKKEALKQL 188
>SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 53 RIMINLCDKNTSMYRIVP*TVNNVRSNGSGEEEIRWKRRVGARRYHLTSLYARR 214
++ +NL D ++ + VN +N +EE +WK +V + Y L + ARR
Sbjct: 591 QLQVNLTDAEDTLAVLDESIVNAAFTNAQLQEEAKWKAQVMQQIYSLQAKEARR 644
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 278 LRQHQNVIEDQAQEIEYLTKQT--VALREVNDSRLRIYEQLELSIQDLERANHRLAVDHA 451
LR N + QA E + +Q+ + E+N R Y+++E DLE A++ A +HA
Sbjct: 217 LRDELNQLMVQADEAKNQMRQSHMAEIEEMNRKMAREYQKIESLRADLEGAHNSSAQEHA 276
Query: 452 ADKKHIK 472
+ ++
Sbjct: 277 HQLQELR 283
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 260 KELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLA 439
+E E + +H+ V+E + E E VAL E S L I E++E ++ + +
Sbjct: 1590 QETEETVEEHEEVVESEEVEEEEAPAVVVALSE-EASALGISEEIEKETEETVEQHEEVV 1648
Query: 440 VDHAADK 460
A +K
Sbjct: 1649 ESEAGEK 1655
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 ENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLE 418
+N R + E ++ H+N + EI L ++ LRE N++ +L IQ E
Sbjct: 1825 DNAKREVVDRENQIQWHKNNEKQLEDEISVLKQKISNLRESNENYADQVAKLNSQIQ--E 1882
Query: 419 RANHRLAVDHAAD--KKHIKSLCSNIDTVEAKAKNYKRLWTN 538
R + ++H + + + L ++ AKA ++K + N
Sbjct: 1883 RESRIADLEHFMNLLRDENEKLRKDVAAANAKATDFKNKYLN 1924
>SB_22161| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
Length = 489
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 RENPTRSNKELETALRQ--HQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 409
++ R +K T + + Q IE+ + L +Q AL++ R EQL+L +
Sbjct: 161 QDEEKRRHKNFSTLIGKLLFQPKIEEISGNARQLNRQITALQQEGQQLNRNREQLKLQAR 220
Query: 410 DLERANHRL 436
D++ HRL
Sbjct: 221 DIQSRLHRL 229
>SB_52664| Best HMM Match : Filament (HMM E-Value=0.3)
Length = 394
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 126 EVMDLVKKKFGGNEELEQDDITSRRCMLDDLQLAAELGKTLLEATR 263
E D++KK EE + + +D QLA ELGKTLLE +
Sbjct: 2 EQEDVMKKLLALKEEATSLR-RENKALQNDCQLAGELGKTLLEQNK 46
>SB_37103| Best HMM Match : DUF164 (HMM E-Value=0.26)
Length = 387
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +2
Query: 251 RSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLE---LSIQDLER 421
R+ +E E+AL+ H+ ++ +Q Y ++ +RE+ + +++++ + LS + LE
Sbjct: 301 RAREEHESALQHHEFMLTEQ-----YQLEKNSWIREIGLLKEQLWKEKDEHSLSKRALEH 355
Query: 422 ANHRLAVDHAADKKHIKSLCSNIDTV 499
A HA++ S C N+ ++
Sbjct: 356 LRTHFANQHASNTDAFDSKCPNVISI 381
>SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 165 EELEQDDITSRRCMLD-DLQLAAELGKTLLEATRNSRQPFASIK 293
EE D+ + + DL LAAELGK LLE Q + ++
Sbjct: 60 EETNDSDVYAELAQKEKDLLLAAELGKALLEKNEELSQKYEKLQ 103
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +2
Query: 257 NKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 436
N ELE + + + I+ E+EYL ++ + N ++ QL+ + +L +
Sbjct: 1644 NSELEDQITNNSSEIQGLKNEVEYLREE-----KNNSYEQKLINQLKNEVLELSAVKEFI 1698
Query: 437 AVDHAADKKHIKSLCSNIDTVEAK-AKNYKRLWTNLTFN*RSTGEEL 574
++ +K+ + D + AK K+Y ++ +L F+ E+L
Sbjct: 1699 EIE-------LKTAAKDRDMLRAKLKKDYNKINNSLKFDLEQAREQL 1738
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Frame = +2
Query: 230 RTRENPTRSNKELETALRQHQN---VIEDQA----QEIEYLTKQTVALREVNDSRLRIYE 388
R R+ R +KELE R+ + ++E Q QE+EYL ++ V ++ ++
Sbjct: 1459 RRRDEQARRDKELEDQKRKDEERRLIMEQQERERRQEMEYLQREKEERLRVEEALKKLER 1518
Query: 389 QLELSIQDLER 421
+ E Q LER
Sbjct: 1519 EKEEERQRLER 1529
>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
Length = 661
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 290 QNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 436
Q IE+ + L +Q AL++ R EQL+L +D++ HRL
Sbjct: 18 QPKIEEISGNARQLNRQITALQQEGQQLNRNREQLKLQARDIQSRLHRL 66
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +2
Query: 257 NKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 436
++ L+ + + VIED ++I+YL + +R+ S L + L +D E+
Sbjct: 1876 SESLKKTVSKKTEVIEDLNRQIKYLEDELEKVRKKEVSLLATLDTLREEKKDQEQMLQDN 1935
Query: 437 AVDHAADKKHIKSLCSNIDTVEAKAKN 517
+ A I+ L T+E K N
Sbjct: 1936 GIRLAELNTQIQDLFEENKTLEEKVSN 1962
>SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 28.7 bits (61), Expect = 5.2
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Frame = +2
Query: 131 NGSGEEEIRWKRRVGARRYHLTSLYARRF-ATGGRTRENPTRSNKELETALRQHQNVIED 307
N G++E+ W+ + R+ +T L + ATG R+ E+E + V+ D
Sbjct: 311 NSEGQDELLWEVQ---RK--VTQLKRKELTATGAELRKQLQAERSEIERLTEEISLVLAD 365
Query: 308 QA-----QEIEYLTKQTVALREVNDSRL-RIYEQLELSIQDLERANHRLAVDHAADKKHI 469
+ + E ++ + + EV++ L IY+ L ++LER N +L D ++
Sbjct: 366 KDADPVFSDNERGSESSGSDTEVDEVELDNIYKDLVKQNEELERKNTKLCHDLHDQREAC 425
Query: 470 KSLCSNIDTVEAKAKNYKR 526
L I E + +N R
Sbjct: 426 AELKVQIRIFEQRGENEAR 444
>SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 146 EEIRWKRRVGARRYHLTS---LYARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQ 316
E +R K + R H L R+AT T++ S K + LRQ+ +++A+
Sbjct: 106 EVLRVKEKETVERLHRQEQLQLERERYATASLTQQKEALSEKLSQITLRQNLKSHKEEAK 165
Query: 317 EIEYLTKQ 340
E L+K+
Sbjct: 166 NKEKLSKE 173
>SB_39939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 111 Q*TMSEVMDLVKKKFGGNEELEQDD 185
Q T E+ DL KK F GN++ + DD
Sbjct: 14 QNTPPELKDLAKKNFNGNDDDDNDD 38
>SB_51946| Best HMM Match : PhyH (HMM E-Value=0.0025)
Length = 230
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 377 RIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKAKNYKRLWTNLTFN 550
R ++ S++ E + L ++ DK+HI+ + +D E +AK+ ++ +LT +
Sbjct: 8 RSQQECIASLEKFEEEGY-LIINDVLDKEHIQRMKDALDECEERAKHLEKSTNHLTLD 64
>SB_50977| Best HMM Match : DUF1409 (HMM E-Value=0.91)
Length = 256
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 195 RRCMLDDLQLAAELGKTLLEATRNSRQPFASIKMLLKIKHKKSNILQSKRLLC 353
R+C + +Q+ + G + E + I++L ++ HK +Q R LC
Sbjct: 31 RQCEAEKVQIIKDHGTLMKEFNTRMQVHLEEIRLLKEVNHKLQTDMQELRDLC 83
>SB_23768| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-07)
Length = 220
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 631 SAMVQISLSLWVFRFRVFVQLFAC 560
+AMV +SLWVF V V + AC
Sbjct: 188 AAMVMDKVSLWVFSITVLVTVLAC 211
>SB_11778| Best HMM Match : DUF1409 (HMM E-Value=0.91)
Length = 336
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 195 RRCMLDDLQLAAELGKTLLEATRNSRQPFASIKMLLKIKHKKSNILQSKRLLC 353
R+C + +Q+ + G + E + I++L ++ HK +Q R LC
Sbjct: 31 RQCEAEKVQIIKDHGTLMKEFNTRMQVHLEEIRLLKEVNHKLQTDMQELRDLC 83
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 194 TSLYARRFATGGRTRENPTRSNKELETALRQHQNVIEDQAQEIEY-LTKQTVALREVNDS 370
TS ++RF RT+E+ R +E+++ + +Q + A + L Q+ A+ + +
Sbjct: 726 TSNVSKRFVYNQRTKEDLLRPKEEIKSQMEANQEALRQNASSWQQSLDNQSEAVTKWSHD 785
Query: 371 RLRIYEQLELSIQDL 415
+ + + S++ L
Sbjct: 786 QTQAVRDVGASVEKL 800
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/93 (23%), Positives = 45/93 (48%)
Frame = +2
Query: 239 ENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLE 418
EN K +T +++ + +++ ++ + KQ + E + S LEL ++DLE
Sbjct: 755 ENGQEVLKRKDTTIQEISSALKEAENKLSGVEKQ---MAEKSSS----INALELKVEDLE 807
Query: 419 RANHRLAVDHAADKKHIKSLCSNIDTVEAKAKN 517
+ V A K+ I+S S I+ +E ++ +
Sbjct: 808 ASIQEQLVCIKAKKEKIESYVSTIERLENESSS 840
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 230 RTRENPTRSNKELETALRQHQNVIEDQAQEIEYLTKQ 340
R + ELE A +QH+ VI+ + +EI L K+
Sbjct: 1788 RCQSELANCKNELEIAKQQHEEVIKGKMREISQLKKE 1824
>SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19)
Length = 320
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +2
Query: 239 ENPTRSNKELETALRQHQNVIED---QAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 409
E+ +N +L +L+ + I D Q E+E L + L + + +++ +LE ++
Sbjct: 159 EDLESANNKLHHSLKFKEEKISDLEGQIDELESLAAEKNRLSQSLEQKMKKIMELENRVE 218
Query: 410 DLERANHRLAVDHAADKKHIKSLCSNIDTVE 502
DL RL K I++L I +E
Sbjct: 219 DLTCETQRLQNSVDQKAKRIQTLEDRISELE 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,797,101
Number of Sequences: 59808
Number of extensions: 359948
Number of successful extensions: 1258
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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