Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0027
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 33 0.032
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 31 0.23
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.23
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.52
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 29 0.91
SPCC1393.12 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.6
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.6
SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA synthase|Sc... 27 2.1
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 27 2.1
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 27 2.8
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 2.8
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 27 3.7
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 26 4.9
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 26 4.9
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 26 6.4
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 26 6.4
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 25 8.5
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 8.5
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 25 8.5
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 25 8.5
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 25 8.5
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 33.5 bits (73), Expect = 0.032
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 262 GTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDT--VANTVSTTVDTTKNVAASA 435
G K T + T A + S+ E L G + +T N ++T DT N ASA
Sbjct: 552 GETKSTPKKSKKKTSKAQQEANSTTAEGKEKLSGDSTETGNSTNKEASTEDTKANATASA 611
Query: 436 VEKGTSLIETAKDTVAQTVDKTKTELHQQLIQ 531
K +ET + V + + + + ++IQ
Sbjct: 612 PNKKKKTVETLQQQVIKEIARKEIPRVYKIIQ 643
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 30.7 bits (66), Expect = 0.23
Identities = 24/90 (26%), Positives = 42/90 (46%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEK 444
T D + + + T + T+S SS +K TS DT+ +++ K A + K
Sbjct: 164 TNTDPIPSPIITNLK-TESSKSSGAKKATSN-AKITDTMLFNHFSSIQKPKLKAEGSTLK 221
Query: 445 GTSLIETAKDTVAQTVDKTKTELHQQLIQA 534
G +L +T +DT ++ K H+ L+ A
Sbjct: 222 GQALKKTLEDTWNNLTEEEKKPYHEGLLAA 251
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.7 bits (66), Expect = 0.23
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDAT---KSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASA 435
T+ +++LN+T AT S++S+A + A ++ +T S T T + +S
Sbjct: 191 TSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSAT--ATSSSISST 248
Query: 436 VEKGTSLIETAKDTVAQTVDKTKT 507
V T L + T A + T +
Sbjct: 249 VSSSTPLTSSNSTTAATSASATSS 272
Score = 25.4 bits (53), Expect = 8.5
Identities = 15/71 (21%), Positives = 39/71 (54%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEK 444
T+ +++L ++ + S+ASS++ TS + +++++++ T+ ++A+S+
Sbjct: 110 TSSSATSSSLASSSTTSSSLASSSI---TSSSLASSSITSSSLASSSTTSSSLASSSTNS 166
Query: 445 GTSLIETAKDT 477
TS T+ T
Sbjct: 167 TTSATPTSSAT 177
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.52
Identities = 17/77 (22%), Positives = 40/77 (51%)
Frame = +2
Query: 8 VDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLA 187
++ T ++++++ T+ SA T++ + TV + + + G+T V T T
Sbjct: 349 LNPTSSISSTSSSSSTS---SAISTISQDHTKTVTSVSDEPTTITASGATSVTTTTKTDF 405
Query: 188 NTVHTTVDTTKNVAAST 238
+TV TT+ +T + +++
Sbjct: 406 DTVTTTIVSTSTLISAS 422
Score = 29.1 bits (62), Expect = 0.69
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +1
Query: 256 LIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASA 435
+ G+ ++AT + T T SV +AV +S+ GTA T+A S + + A+ +
Sbjct: 1074 ITGSLSSSIATA-SVTGSPTSSV--TAVSSTSSVEGTASSTIAAAASAAT-LSSDAASGS 1129
Query: 436 VEKGTSLIETAKDTVAQTVDKTKT 507
+S ++ + A T D + T
Sbjct: 1130 STVTSSATASSSSSAATTADSSVT 1153
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 28.7 bits (61), Expect = 0.91
Identities = 24/84 (28%), Positives = 30/84 (35%)
Frame = +1
Query: 262 GTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVE 441
GTA T +NT V + GT+ T T TT T + V
Sbjct: 1126 GTATGTTTVVINTPTTTGSEVLPTTGATGTAGTETQLTTATEVQPTTGATGTAGTETQVT 1185
Query: 442 KGTSLIETAKDTVAQTVDKTKTEL 513
GT ET T +T T TE+
Sbjct: 1186 TGT---ETQATTATETQATTATEV 1206
>SPCC1393.12 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 108
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 340 EKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAK 471
EK S + + K+ V + + + KNV + A KGT E K
Sbjct: 58 EKAKSYLQSGKERVVDELDKPRENVKNVLSEAQAKGTEQAEALK 101
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 277 TVATTLNTTVDATKS--VASSAVEKGTSLIGTAKDTVANTV---STTVDTTKNVAASAVE 441
T +TTLNT+ T S + SS +S++ ++ +++V ST + ++ V S
Sbjct: 3205 TSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI 3264
Query: 442 KGTSLIETAKDTVAQTVDKTKTEL 513
+S++ ++ + TV T T +
Sbjct: 3265 TSSSVLNSSTPITSSTVVNTSTPI 3288
Score = 27.1 bits (57), Expect = 2.8
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = +1
Query: 277 TVATTLNTTVDATKSV---ASSAVEKGTSLIGTAKDTVANTV--STTVDTTKNVAASAVE 441
T +TTLNT+ T S +S+A+ T+L + T ++ + ST + ++ + +S
Sbjct: 3301 TSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSSSILNSSTPV 3360
Query: 442 KGTSLIETAKDTVAQTVDKTKTEL 513
+S++ ++ + TV + T +
Sbjct: 3361 TSSSVLNSSTPITSSTVVNSSTPI 3384
>SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA
synthase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 447
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKN 124
+T+DA K++ A+EKG AI KE VS +V A N
Sbjct: 286 STLDAKKSLTDKALEKGLMAI--TKERFNKRVSPSVYAPTN 324
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 292 LNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKN 420
L +T+DA KS+ A+EKG L+ K+ VS +V N
Sbjct: 284 LLSTLDAKKSLTDKALEKG--LMAITKERFNKRVSPSVYAPTN 324
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 2.1
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 TVDATKNVAASAIEKGTTAIGSAK-ETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDT 181
T +T AAS ++ K E ++TV+ + T+ VAAA T +
Sbjct: 77 TSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQTVAAAAPSNPDTTATSEAPI 136
Query: 182 LANTVHTTVDTTKNVAA-STVEKG 250
ANT+ V +NVA + VE G
Sbjct: 137 DANTL--AVGAQRNVAVENMVEMG 158
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 274 DTVATTLNTTVDATKSVASSAVEKGT-SLIGTAKDTVANTVSTTVDTTKNVAASAVEKGT 450
D ++ ++T A+ +V+SS V+ GT + + KD + +V T+ N AAS GT
Sbjct: 200 DLPSSEISTKAPASTTVSSS-VDPGTINEDSSMKDHTTSNEQASVLTSANTAASTNTNGT 258
Query: 451 S 453
+
Sbjct: 259 A 259
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.1 bits (57), Expect = 2.8
Identities = 17/68 (25%), Positives = 26/68 (38%)
Frame = +2
Query: 14 ATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANT 193
+T+ S T+I T N+ +TTV T ++ +T + T T T
Sbjct: 53 STETSTHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPT 112
Query: 194 VHTTVDTT 217
H TT
Sbjct: 113 THVNSTTT 120
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 26.6 bits (56), Expect = 3.7
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +1
Query: 286 TTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIET 465
+ + + V A +V A S G AK+ A T + +TT +VAAS +S +
Sbjct: 34 SVVTSKVYAYTTVTLEAAASAISTNGAAKE--AATAAGDAETTSSVAASVTPAASSSVAA 91
Query: 466 AKDTVAQT 489
+ VA +
Sbjct: 92 SVTPVASS 99
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 704 GCSYVLRCVYGFSQRAFSTVNERRSFVICRSRCIFGQ 594
G Y R + GFS + VN++ F C+ I Q
Sbjct: 190 GTPYSYRFMDGFSSHTYKFVNDKGEFYYCKWHFITNQ 226
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 35 SAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANTVHTTVD 211
++IEK +T+I ++ T V+TTVD +++ + T D A T D
Sbjct: 251 ASIEKESTSIRNSTVTNDRVVNTTVDVSQSQTVETSGPSKEVPTTQPDASAAKPRTEFD 309
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 25.8 bits (54), Expect = 6.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 20 KNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAA 136
KNV EK +T +E V+NT S ++AT N ++A
Sbjct: 73 KNVQQQNPEKISTLQQVKEEEVSNTFSAPLNATGNFSSA 111
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 160 CGNSKRYACKHRSHHCRYYEKC 225
C + Y C RSHHC KC
Sbjct: 99 CEKCQEYKCD-RSHHCSQCNKC 119
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 134 AVVEKGSTIVGTAKDTLANT 193
AV KGST VG++ DTL+ +
Sbjct: 5 AVASKGSTNVGSSTDTLSTS 24
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 8.5
Identities = 20/80 (25%), Positives = 31/80 (38%)
Frame = +2
Query: 5 TVDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTL 184
TV T V A T+ + S + T++T T + V+E + V T +
Sbjct: 673 TVSGTVEVIEPAAGTVTSTVYSGTQEYTTTLATA-SGTVSGTVEVIEPAAGTVTTTVYSG 731
Query: 185 ANTVHTTVDTTKNVAASTVE 244
TT+ T + TVE
Sbjct: 732 TQEYTTTLATASGTVSGTVE 751
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 510 LSFRFIYSLCDCVFGGFN 457
LS FIY L VFG FN
Sbjct: 536 LSIEFIYQLATIVFGWFN 553
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 25.4 bits (53), Expect = 8.5
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Frame = +1
Query: 259 IGTAKDTVATTLNTTVDATKSVASSAVEKGTSL------IGTAKDTVANTVSTTVDTTKN 420
+GT+ + LN DA SV S K TSL + + V + + KN
Sbjct: 1 MGTSGIEIFAALNDFTDAIVSVPESVCGKFTSLKEIDAQVRDIRQNVIQEIGVVLKNEKN 60
Query: 421 VAASAVEKGTSLIETAKDTVAQTVDK 498
S E+ L +T K+ + + K
Sbjct: 61 DELSGEERCERLQKTLKEILPYSDSK 86
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 537 SYAGAAKDTVANTVHSTVNLTKNAAASTYDK 629
S+ G K A + ST+N TK+ AST+ +
Sbjct: 366 SFKGLMKKMKAEELCSTLNCTKDELASTFSE 396
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,223,045
Number of Sequences: 5004
Number of extensions: 37229
Number of successful extensions: 192
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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