Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0027
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0476 - 3660327-3661261,3661401-3661668 35 0.078
03_02_0841 - 11669707-11670468 33 0.18
02_02_0280 - 8515894-8517309 33 0.24
05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824 30 2.2
07_01_1016 + 8641370-8641393,8642676-8643012,8643292-8643326 29 2.9
07_01_0998 - 8414492-8415175 29 3.9
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 29 3.9
04_04_0765 - 27910189-27912393,27912521-27912598 29 5.1
01_07_0318 + 42703176-42703473,42703563-42704290 28 6.7
09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917 28 8.9
07_03_0527 - 19085828-19086319 28 8.9
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 28 8.9
>03_01_0476 - 3660327-3661261,3661401-3661668
Length = 400
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/78 (28%), Positives = 29/78 (37%)
Frame = +1
Query: 262 GTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVE 441
G AKD+ ++ DA A SA + +AKD A D + A +A E
Sbjct: 245 GAAKDSAWERTSSAKDAAAEKAGSAKDAAWEKTSSAKDAAAEKAGAAKDAAREKAEAAGE 304
Query: 442 KGTSLIETAKDTVAQTVD 495
K E AK D
Sbjct: 305 KARQSKEAAKGKAGAAKD 322
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 7/92 (7%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVST-------TVDTTKNV 423
+AKD A + DA SSA + G AKD + + K
Sbjct: 257 SAKDAAAEKAGSAKDAAWEKTSSAKDAAAEKAGAAKDAAREKAEAAGEKARQSKEAAKGK 316
Query: 424 AASAVEKGTSLIETAKDTVAQTVDKTKTELHQ 519
A +A + E AKD +T + + + ++
Sbjct: 317 AGAAKDAAWEKAEAAKDAAWETAEAAREKANE 348
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/87 (21%), Positives = 31/87 (35%)
Frame = +1
Query: 244 KGRLLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNV 423
K + + + D A D+ SSA + G+AKD S+ D
Sbjct: 228 KAQETLRQSTDAAAEKAGAAKDSAWERTSSAKDAAAEKAGSAKDAAWEKTSSAKDAAAEK 287
Query: 424 AASAVEKGTSLIETAKDTVAQTVDKTK 504
A +A + E A + Q+ + K
Sbjct: 288 AGAAKDAAREKAEAAGEKARQSKEAAK 314
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/77 (22%), Positives = 27/77 (35%)
Frame = +1
Query: 289 TLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETA 468
TL + DA A +A + +AKD A + D +SA + A
Sbjct: 232 TLRQSTDAAAEKAGAAKDSAWERTSSAKDAAAEKAGSAKDAAWEKTSSAKDAAAEKAGAA 291
Query: 469 KDTVAQTVDKTKTELHQ 519
KD + + + Q
Sbjct: 292 KDAAREKAEAAGEKARQ 308
>03_02_0841 - 11669707-11670468
Length = 253
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +1
Query: 274 DTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTS 453
D+VA N T DA++ + KD VA S + TKN +
Sbjct: 128 DSVARKTNETADASRDKLGEYKDYTADKTRETKDAVAQKASDASEATKNKLGEYKDALAR 187
Query: 454 LIETAKDTVAQTVDKTK 504
AKDT AQ + K
Sbjct: 188 KTRDAKDTTAQKATEFK 204
Score = 31.9 bits (69), Expect = 0.55
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = +1
Query: 262 GTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVE 441
G A+DT A + T DAT+ + D+VA + T D +++ +
Sbjct: 91 GGARDTAAEKTSQTADATRDKLGEYKDYTADKARETNDSVARKTNETADASRDKLGEYKD 150
Query: 442 KGTSLIETAKDTVAQ 486
KD VAQ
Sbjct: 151 YTADKTRETKDAVAQ 165
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/75 (25%), Positives = 28/75 (37%)
Frame = +2
Query: 11 DATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLAN 190
+ATKN + AK+T A + D K A + + AKD +
Sbjct: 172 EATKNKLGEYKDALARKTRDAKDTTAQKATEFKDGVKATAQETRDATADTARKAKDATKD 231
Query: 191 TVHTTVDTTKNVAAS 235
T T D + AA+
Sbjct: 232 TTQTAADKARETAAT 246
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +1
Query: 268 AKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAAS 432
AKDT A D K+ A + AKD +T T D + AA+
Sbjct: 192 AKDTTAQKATEFKDGVKATAQETRDATADTARKAKDATKDTTQTAADKARETAAT 246
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 271 KDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGT 450
KD VA + +ATK+ + AKDT A + D V A+A E
Sbjct: 160 KDAVAQKASDASEATKNKLGEYKDALARKTRDAKDTTAQKATEFKD---GVKATAQETRD 216
Query: 451 SLIETAKDTVAQTVDKTKT 507
+ +TA+ T D T+T
Sbjct: 217 ATADTARKAKDATKDTTQT 235
>02_02_0280 - 8515894-8517309
Length = 471
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/78 (29%), Positives = 31/78 (39%)
Frame = +1
Query: 268 AKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKG 447
AKD A + K A +A + AKD +T T + TK+VA S G
Sbjct: 168 AKDAGAHAAQAATEKAKVAAGTATDYARQAAAKAKDVTLSTGGTAAEKTKDVALST---G 224
Query: 448 TSLIETAKDTVAQTVDKT 501
+ E AK + D T
Sbjct: 225 GTASEYAKQAAVKGKDVT 242
Score = 33.1 bits (72), Expect = 0.24
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Frame = +1
Query: 244 KGRLLIGTAKDTVATTLNTTVDATKSVASSAVEK----GTSLIGTAKDTVANTVSTTVDT 411
K ++ GTA D D T S +A EK S GTA + D
Sbjct: 182 KAKVAAGTATDYARQAAAKAKDVTLSTGGTAAEKTKDVALSTGGTASEYAKQAAVKGKDV 241
Query: 412 TKNVAASAVEKGTSLIETAKDTVAQTVDKTKTELHQQ 522
T + +A E + E A+D A +T E QQ
Sbjct: 242 TLSAGETAAEHAKAAAEKARD-AAVAAGRTTAEYTQQ 277
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +2
Query: 38 AIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANTVHTTVDTT 217
A + G+TA A + A + DA + A A EK GTA D D T
Sbjct: 146 AKQAGSTAATRAADYAAAKGTEAKDAGAHAAQAATEKAKVAAGTATDYARQAAAKAKDVT 205
Query: 218 KNVAASTVEK 247
+ + EK
Sbjct: 206 LSTGGTAAEK 215
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 DATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAA----AVVEKGSTIVGTAKD 178
D T + +A E A A++ TT + T+ A + G+T+ AK+
Sbjct: 240 DVTLSAGETAAEHAKAAAEKARDAAVAAGRTTAEYTQQAAVKAKDVTLSTGATVAQKAKE 299
Query: 179 TLANTVHTTVDTTKNVAASTVEKGA 253
A+T H + + A E A
Sbjct: 300 VTADTAHKVAEYAREKAEQGKEAAA 324
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = +1
Query: 262 GTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASA-- 435
GTA + D T S +A E + A+D TT + T+ A A
Sbjct: 225 GTASEYAKQAAVKGKDVTLSAGETAAEHAKAAAEKARDAAVAAGRTTAEYTQQAAVKAKD 284
Query: 436 --VEKGTSLIETAKDTVAQTVDK 498
+ G ++ + AK+ A T K
Sbjct: 285 VTLSTGATVAQKAKEVTADTAHK 307
>05_06_0256 + 26720919-26720978,26721071-26721457,26721669-26721824
Length = 200
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +2
Query: 14 ATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANT 193
A+K+ A+ A ++ + A G A A T +ATK A A E+ S AKD ++T
Sbjct: 29 ASKDKASEAKDRASEAAGHA----AGKGQDTKEATKEKAQAAKERASETAQAAKDKTSST 84
Query: 194 VHTTVDTTKNVAASTVEKGAF 256
D A S + G F
Sbjct: 85 SQAARD---KAAESKDQTGGF 102
>07_01_1016 + 8641370-8641393,8642676-8643012,8643292-8643326
Length = 131
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKD 178
AT A K AA+A + TA ++K V T ATK AAA E G VG A++
Sbjct: 21 ATASAAKARAAAASKVRATAAAASK------VQATSSATKARAAAAAEAGGGGVGEAEE 73
>07_01_0998 - 8414492-8415175
Length = 227
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCVYCSTNCVCY 379
C C CY CC C CV Y
Sbjct: 5 CCECGCYECYDACCDRCCCGCVSY 28
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 5 TVDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKG 151
T+ K V S +E+G T I +A+ETV + + T +A A++ + G
Sbjct: 1365 TMTTEKTVQDSMVEEGGTNIAAAEETVEH-AAATAEALAGQASSTEQNG 1412
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDT 181
A V VAA A+ TA+ ++ A+ V V A+ + AAAV GS V A ++
Sbjct: 412 AVVAPDSPVAAVAVFSSPTAVAASSSPAASPVD-IVAASSSPAAAVAAFGSPAVVVASNS 470
Query: 182 L 184
L
Sbjct: 471 L 471
>01_07_0318 + 42703176-42703473,42703563-42704290
Length = 341
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCVYCSTNCVCYCVFCGTD*RCAFF 340
C R C V C C C+ C +C T C F
Sbjct: 68 CTNTGRRPCVVSCPSNCPNKCLVACAYCLTFCMCDLF 104
>09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917
Length = 328
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -3
Query: 450 CAFLNCRSCYVFC--CVYCSTNCVCYCVFC 367
C F+ CR + FC C T V YC C
Sbjct: 297 CTFMRCRCGFFFCYNCAAPMTKLVHYCKKC 326
>07_03_0527 - 19085828-19086319
Length = 163
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGTTAIGSAKE---TVANTVSTTVDATK--NVAAAVVEKGSTIVG 166
A V + + AASA TA GSA+E A +V+T + + A V+ + T+ G
Sbjct: 96 AAVGSAREAAASASASVATAAGSAREDMAAAAGSVATVAGLAREDDGGARVLRRRETVAG 155
Query: 167 TAK 175
K
Sbjct: 156 LRK 158
>01_06_1729 +
39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 268 AKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVD----TTKNVAASA 435
AKD + + V + S + V++ + GT D + + +V +TKN+ +
Sbjct: 622 AKD-IYSAKEKKVQSEPSSSKGDVKETIDVSGTENDVGCKSTTISVSEHRGSTKNMYSVK 680
Query: 436 VEKGTSLIETAKDTVAQTVDKTKTE 510
+K S + K TV +TVD + TE
Sbjct: 681 EKKVQSKPSSLKGTVKETVDVSGTE 705
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,775,883
Number of Sequences: 37544
Number of extensions: 248657
Number of successful extensions: 850
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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