Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0027
(737 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011) 38 0.008
SB_43724| Best HMM Match : AMP-binding (HMM E-Value=2.6e-09) 37 0.015
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 36 0.026
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024) 36 0.026
SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_53857| Best HMM Match : DUF948 (HMM E-Value=5.2) 34 0.14
SB_22| Best HMM Match : Disintegrin (HMM E-Value=0.39) 33 0.24
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 32 0.42
SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75) 31 0.74
SB_23233| Best HMM Match : Mucin (HMM E-Value=2.1) 31 0.97
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92) 31 0.97
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 31 1.3
SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59) 31 1.3
SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3) 30 1.7
SB_8793| Best HMM Match : C1_1 (HMM E-Value=0.21) 30 1.7
SB_53841| Best HMM Match : PhdYeFM (HMM E-Value=6.3) 30 2.3
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 30 2.3
SB_422| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_21597| Best HMM Match : ig (HMM E-Value=2.9e-14) 29 3.0
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_23862| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 29 5.2
SB_31497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 5.2
SB_926| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_43232| Best HMM Match : Morbilli_P (HMM E-Value=4.2) 28 6.9
SB_30912| Best HMM Match : SEA (HMM E-Value=1.1) 28 6.9
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_45751| Best HMM Match : HlyIII (HMM E-Value=0.0006) 28 9.1
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015) 28 9.1
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 41.9 bits (94), Expect = 5e-04
Identities = 33/81 (40%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGT-TAIGSAKETVANTVSTTVDATKNVAAAV-VEKGSTIVGTAK 175
ATV AT AASA T T + TV T +TTV AT A V V +T T
Sbjct: 201 ATVTATVTAAASATAAVTATVTATVTVTVTATAATTVTATVTAATTVTVTVTATAATTVT 260
Query: 176 DTLANTVHTTVDTTKNVAAST 238
T+ TV TV T V A+T
Sbjct: 261 VTVTATVTATVTATVTVTATT 281
>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
Length = 972
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 426 CYVFCCVYCSTNCVCYCVFCGTD*RCAFFY 337
CY +C YC C CYC +C C ++Y
Sbjct: 480 CYCYCYYYCYYYCYCYCYYCCYYCYCYYYY 509
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 426 CYVFCCVYCSTNCVCYC-VFCGTD*RCAFFYSRARYTFRSIYGCV*SGCYSVFSSA 262
CY +C YC C YC +C +Y Y + Y C C ++A
Sbjct: 472 CYCYCYYYCYCYCYYYCYYYCYCYCYYCCYYCYCYYYYHHYYCCYYCCCSCTATTA 527
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 432 RSCYVFCCVYCSTNCVCYCVF 370
R CY +C YC C CYC +
Sbjct: 468 RYCYCYC--YCYYYCYCYCYY 486
>SB_43724| Best HMM Match : AMP-binding (HMM E-Value=2.6e-09)
Length = 490
Score = 37.1 bits (82), Expect = 0.015
Identities = 25/92 (27%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 LLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSL-IGTAKDTVANTVSTTVDTTKNVAA 429
+ I T + ++A T+ TTV+ + ++ ++ VE+ ++ I T + ++A T +TTV+ + +
Sbjct: 100 MTITTVEQSIAMTI-TTVEQSIAMTTTTVEQSIAMTITTVEQSIAMT-TTTVEQSIAMTT 157
Query: 430 SAVEKGTSLIETAKDTVAQTVDKTKTELHQQL 525
+ VE+ ++ T TV Q++ T T + Q +
Sbjct: 158 TTVEQSIAMTTT---TVEQSIAMTTTTVEQSI 186
Score = 35.5 bits (78), Expect = 0.045
Identities = 25/92 (27%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 LLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSL-IGTAKDTVANTVSTTVDTTKNVAA 429
+ I T + ++A T+ TTV+ + ++ + VE+ ++ I T + ++A T +TTV+ + +
Sbjct: 78 MTITTVEQSIAMTI-TTVEQSIAMTITTVEQSIAMTITTVEQSIAMT-TTTVEQSIAMTI 135
Query: 430 SAVEKGTSLIETAKDTVAQTVDKTKTELHQQL 525
+ VE+ ++ T TV Q++ T T + Q +
Sbjct: 136 TTVEQSIAMTTT---TVEQSIAMTTTTVEQSI 164
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/104 (20%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +1
Query: 253 LLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAAS 432
+ I T + ++A T TTV+ + ++ ++ VE+ ++ T + +TTV+ + + +
Sbjct: 23 MTITTVEQSIAMT-TTTVEQSIAMTTTTVEQSIAMTTTTVEQSIAMTTTTVEQSIAMTIT 81
Query: 433 AVEKGTSL-IETAKDTVAQTVDKTKTELHQQLIQACLMLALLKT 561
VE+ ++ I T + ++A T+ + + + +A+ T
Sbjct: 82 TVEQSIAMTITTVEQSIAMTITTVEQSIAMTITTVEQSIAMTTT 125
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEK 444
T + ++A T+ TTV+ + ++ ++ VE+ ++ T + +TTV+ + + + VE+
Sbjct: 16 TVEQSIAMTI-TTVEQSIAMTTTTVEQSIAMTTTTVEQSIAMTTTTVEQSIAMTTTTVEQ 74
Query: 445 GTSL-IETAKDTVAQTV 492
++ I T + ++A T+
Sbjct: 75 SIAMTITTVEQSIAMTI 91
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/78 (26%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 295 NTTVDATKSVASSAVEKGTSL-IGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAK 471
+TTV+ + ++ ++ VE+ ++ I T + ++A T +TTV+ + + + VE+ ++ T
Sbjct: 3 STTVEQSIAMTTTTVEQSIAMTITTVEQSIAMT-TTTVEQSIAMTTTTVEQSIAMTTT-- 59
Query: 472 DTVAQTVDKTKTELHQQL 525
TV Q++ T T + Q +
Sbjct: 60 -TVEQSIAMTTTTVEQSI 76
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/81 (23%), Positives = 44/81 (54%)
Frame = +1
Query: 253 LLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAAS 432
+ I T + ++A T TTV+ + ++ ++ VE+ ++ T + +TTV+ + + +
Sbjct: 133 MTITTVEQSIAMT-TTTVEQSIAMTTTTVEQSIAMTTTTVEQSIAMTTTTVEQSIAMTIT 191
Query: 433 AVEKGTSLIETAKDTVAQTVD 495
VE+ ++ T TV Q+++
Sbjct: 192 TVEQSIAMTTT---TVKQSMN 209
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 36.3 bits (80), Expect = 0.026
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 286 TTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTS--LI 459
TTL+T+ + +S++ K T+ + T+ T ST+ TTK ++AVE TS
Sbjct: 460 TTLSTSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTS--TTKATTSTAVEATTSPAAT 517
Query: 460 ETAKDTVAQTVDKTK 504
ETA T ++ K
Sbjct: 518 ETAPPTTTESRSTNK 532
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 259 IGTAKDTVATTLNT-TVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASA 435
+ T K T+ +T T +ATKS + A T T K T ++ STT TT ++
Sbjct: 432 LSTQKTDATTSQSTSTTEATKSQTTKATT--TLSTSTTKATTTSSTSTTKATTTLSTSTT 489
Query: 436 VEKGTSLIETAKDTVAQTVDKT 501
T T K T + V+ T
Sbjct: 490 KATTTPSTSTTKATTSTAVEAT 511
>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
Length = 249
Score = 36.3 bits (80), Expect = 0.026
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +1
Query: 253 LLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAAS 432
++I T T +T TT+ AT + ++ + T+ I T T+ T++TT+ TT +
Sbjct: 132 VIISTTTTTTSTANTTTITATITTTTTTITI-TATITTITTTITATITTTISTTTPFITA 190
Query: 433 AVEKGTSLIETAKDTVAQT 489
+ + T T+ T
Sbjct: 191 TISTTITTTITTTTTITTT 209
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDATKSVA--SSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAV 438
T T TT++TT+ T + S+ T++I + T +T +TT T +
Sbjct: 100 TTTTTTTTTISTTISTTTTTTTISTTTTTITAVIISTTTTTTSTANTTTITATITTTTTT 159
Query: 439 EKGTSLIETAKDTVAQTVDKT 501
T+ I T T+ T+ T
Sbjct: 160 ITITATITTITTTITATITTT 180
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/82 (20%), Positives = 35/82 (42%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEK 444
TA T TT T ++ ++ T+ I T + T+STT+ TT +
Sbjct: 150 TATITTTTTTITITATITTITTTITATITTTISTTTPFITATISTTITTTITTTTTITTT 209
Query: 445 GTSLIETAKDTVAQTVDKTKTE 510
T++ + T++ ++++
Sbjct: 210 TTTIYTITTTIIIITINISQSK 231
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +1
Query: 283 ATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIE 462
ATT TT+ T + ++ ++ I T T T+STT T V S TS
Sbjct: 92 ATTTTTTITTTTTTTTTI----STTISTT--TTTTTISTTTTTITAVIISTTTTTTSTAN 145
Query: 463 TAKDTVAQTVDKTKTEL 513
T T+ T+ T T +
Sbjct: 146 TT--TITATITTTTTTI 160
>SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 35.5 bits (78), Expect = 0.045
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +1
Query: 259 IGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVS---TTVDTTKNVAA 429
+GT++ TVA ++ ++ + A + T +GT++ TVA S + T+++ A
Sbjct: 118 LGTSRHTVALGISRIRHYSRHTVALATSRHTVALGTSRHTVALATSRHTVALGTSRHTVA 177
Query: 430 SAVEKGTSLIETAKDTVA 483
A + T + T++ TVA
Sbjct: 178 LATSRHTVALGTSRHTVA 195
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 17 TKNVAASAIEKGTTAIGSAKETVANTVS---TTVDATKNVAAAVVEKGSTIVGTAKDTLA 187
+++ A A + T A+G+++ TVA S + +++ A + + +GT++ T+A
Sbjct: 136 SRHTVALATSRHTVALGTSRHTVALATSRHTVALGTSRHTVALATSRHTVALGTSRHTVA 195
Query: 188 NTVHTTVDTTKNVAAS 235
T +A S
Sbjct: 196 LVCRDTYSDCARLARS 211
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 53 TTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDT--LANTVHT-TVDTTKN 223
T A+G+++ TVA +S +++ A + + +GT++ T LA + HT + T+++
Sbjct: 115 TAALGTSRHTVALGISRIRHYSRHTVALATSRHTVALGTSRHTVALATSRHTVALGTSRH 174
Query: 224 VAA 232
A
Sbjct: 175 TVA 177
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 349 TSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTVA 483
T+ +GT++ TVA +S +++ A A + T + T++ TVA
Sbjct: 115 TAALGTSRHTVALGISRIRHYSRHTVALATSRHTVALGTSRHTVA 159
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 34.3 bits (75), Expect = 0.10
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +1
Query: 277 TVATTLNTTVDATKSVASSAVEKGTSLIGTA---KDTVANTVSTTVDTTKNVAASAVEKG 447
TVA D T ++A + T++ GT+ K TVA ++ +T + +AV +
Sbjct: 2451 TVAAETTVVRDTTAVPGTTAALEATAVTGTSTLPKTTVAADTTSVPETAAEIETTAVPET 2510
Query: 448 TSLIETAKDTVAQTVDKTKTELHQQLIQ 531
T+++ET + T KT ++Q
Sbjct: 2511 TAVLETTAVPMFTTGPKTTASSETIVVQ 2538
>SB_53857| Best HMM Match : DUF948 (HMM E-Value=5.2)
Length = 217
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +1
Query: 289 TLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETA 468
TLN+ D +S ++ V T + + V+NT ++ V+ SA+E S +E +
Sbjct: 34 TLNSIQDTLESNSTLEVSNSTLEVSYSTLEVSNTTQDVCNSMLEVSNSALEVSNSTLEVS 93
Query: 469 KDTVA---QTVDKTKTELHQQLIQA-CLML 546
T+ T++ + + L +L Q+ C++L
Sbjct: 94 NSTLEVCNPTLEVSNSTLEDELFQSRCVVL 123
>SB_22| Best HMM Match : Disintegrin (HMM E-Value=0.39)
Length = 226
Score = 33.1 bits (72), Expect = 0.24
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = +1
Query: 220 KCSSIDR*KGRLLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVST 399
K S+ D KG T T T N+T D TKS T + T T T S+
Sbjct: 53 KSSTCDLTKGSTCDLTKSSTCDLTRNSTCDLTKSSTCDLTRNSTCDL-TKSSTCDLTKSS 111
Query: 400 TVDTTKNVAASAVEKGT---SLIETAKDTVAQTVDKTKT 507
T D TK+ T + T T + T D TK+
Sbjct: 112 TCDLTKSSTCDLTRNSTCDLTKSSTCDLTKSSTCDLTKS 150
Score = 32.3 bits (70), Expect = 0.42
Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 3/119 (2%)
Frame = +1
Query: 160 CGNSKRYACKHRSHHCRYYEKCSSIDR*KGRLLIGTAKDTVATTLNTTVDATKSVASSAV 339
C +K C + K S+ D K T T T N+T D TKS
Sbjct: 81 CDLTKSSTCDLTRNSTCDLTKSSTCDLTKSSTCDLTKSSTCDLTRNSTCDLTKSSTCDLT 140
Query: 340 EKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGT---SLIETAKDTVAQTVDKTKT 507
+ T + T T T S+T D TK+ + T + T T + T D TK+
Sbjct: 141 KSSTCDL-TKSSTCDLTKSSTCDLTKSSTCDLTKSSTCDLTKSSTCDLTKSSTCDLTKS 198
>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 32.7 bits (71), Expect = 0.32
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +1
Query: 283 ATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIE 462
ATT T T ++ ++A + TA+ T T +TTV + + K T++ E
Sbjct: 336 ATTTATATTTTAAITTTAATTTSEAAATAEATTTATATTTVTAATSTKTTTAMKKTTVKE 395
Query: 463 TAKDTVAQTVDKTKT 507
T + VD T
Sbjct: 396 ET-TTAGKNVDSINT 409
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVV-EKGSTIVGTAKD 178
AT AT+ A+ + TA+ +A +T+ +T TT T+N + K T A
Sbjct: 1782 ATETATEVTTATQVTT-ETAVSTAVQTLTSTHVTTATNTRNATLTLTHHKTETSTAVAMT 1840
Query: 179 TLANTVHTT 205
T+ +TV TT
Sbjct: 1841 TVPHTVTTT 1849
Score = 31.1 bits (67), Expect = 0.97
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = +1
Query: 280 VATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSL- 456
V T LNT V + SVA + ++ I T+ T T + T TT V A++ + T++
Sbjct: 1949 VTTQLNTQVVNSTSVAIAT----STAIATSTSTHVTTQTNTAVTTSVVMATSTQTNTAVT 2004
Query: 457 --IETAKDT----VAQTVDKTKTELH 516
I AK T T +TKT H
Sbjct: 2005 TSIAIAKSTSVVLATSTAIETKTHFH 2030
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/79 (20%), Positives = 33/79 (41%)
Frame = +1
Query: 256 LIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASA 435
L+ T D+ + T D+T + + + ++ T D+ V T D+T + +
Sbjct: 864 LVVTGNDSTVKLVVTGNDSTVKLVVTGNDSTVKIVVTGNDSTVKLVVTGNDSTVKLVVTG 923
Query: 436 VEKGTSLIETAKDTVAQTV 492
+ L+ T D+ + V
Sbjct: 924 NDSTVKLVVTGNDSTVKLV 942
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/80 (21%), Positives = 33/80 (41%)
Frame = +1
Query: 253 LLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAAS 432
L+ G D+ + T D+T + + + L+ T D+ V T D+T + +
Sbjct: 852 LVTGKRIDSTVKLVVTGNDSTVKLVVTGNDSTVKLVVTGNDSTVKIVVTGNDSTVKLVVT 911
Query: 433 AVEKGTSLIETAKDTVAQTV 492
+ L+ T D+ + V
Sbjct: 912 GNDSTVKLVVTGNDSTVKLV 931
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/77 (19%), Positives = 31/77 (40%)
Frame = +1
Query: 262 GTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVE 441
GT ++ +D+T + + + L+ T D+ V T D+T + + +
Sbjct: 844 GTYGCSLLLVTGKRIDSTVKLVVTGNDSTVKLVVTGNDSTVKLVVTGNDSTVKIVVTGND 903
Query: 442 KGTSLIETAKDTVAQTV 492
L+ T D+ + V
Sbjct: 904 STVKLVVTGNDSTVKLV 920
>SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75)
Length = 886
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 310 ATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKG 447
ATK ASSA ++ ++ T T T +TT TT + +G
Sbjct: 244 ATKISASSATDREVVIVTTTTTTTTTTTTTTTTTTTTTTTTTTGRG 289
>SB_23233| Best HMM Match : Mucin (HMM E-Value=2.1)
Length = 350
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 217 EKCSSIDR*KGRLLIGTAKDTVATTLNTTVDATKSVASSAV----EKGTSLIGTAKDTVA 384
E C K ++ +G D TTL+T T + SS++ GT T TV+
Sbjct: 130 EICDQYRTSKTKVYLGRTNDAPQTTLSTLTTTTTTTTSSSIATPSTSGTYTTATTTTTVS 189
Query: 385 NTVSTTVDT 411
++++T T
Sbjct: 190 SSIATPSTT 198
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 277 TVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSL 456
T+ TT+NTT+ T + T+ I T T+ T++TT+ TT T+
Sbjct: 1070 TINTTINTTIITTTITTTIITTTITTTIITT--TITTTITTTIITTTVTTTIITTTITTT 1127
Query: 457 IETAKDTV 480
I T D +
Sbjct: 1128 IITTTDPI 1135
>SB_11880| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.92)
Length = 425
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +2
Query: 11 DATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLAN 190
+ T A+ + TTA T+A V+ T AT+ + +T A+ T+
Sbjct: 221 EVTTTTTAAEVTMTTTAAEVTMTTIATEVTMTTTATEVTTTTTAAEVATTTTAAEVTMTT 280
Query: 191 TVH--TTVDTTKNVAASTVEK 247
T TT T V +T K
Sbjct: 281 TAAEVTTTTTATEVTMTTTAK 301
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/104 (23%), Positives = 43/104 (41%)
Frame = +1
Query: 190 HRSHHCRYYEKCSSIDR*KGRLLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTA 369
H+ H+ R ++ID I T T+ T N+T ++T +A + L+
Sbjct: 1138 HQHHNHRTTTASTTIDS----TTIATTNSTIITNTNSTTNST--IAPIPIAPSLPLMAPP 1191
Query: 370 KDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTVAQTVDKT 501
+ N STT D+T N + T++ T++ + T
Sbjct: 1192 PQPLNNYRSTTTDSTTNNTIDSRTTITTISTIITTTISTIITTT 1235
>SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59)
Length = 218
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCV-----YCSTNCVCYCVFC 367
C + C +C V CCV +C CV CV C
Sbjct: 86 CRVMRCVACRVMCCVACFVMHCVACCVMRCVAC 118
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCV-----YCSTNCVCYCVFC 367
C + C C V CCV +C CV CV C
Sbjct: 14 CRVMRCVGCRVMCCVACFVMHCVACCVMRCVAC 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCVYCSTNCVCYCVFC 367
C + C +C V CV C CV +CV C
Sbjct: 46 CCVMRCVACCVMRCVAC---CVMHCVAC 70
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCVYCSTNCVCYCVFC 367
C + C +C V CV C CV CV C
Sbjct: 54 CCVMRCVACCVMHCVAC---CVMRCVAC 78
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCVYCSTNCVCYCVFC 367
C + C +C V CV C CV CV C
Sbjct: 118 CCVMRCVACCVMRCVGC---CVMRCVAC 142
>SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3)
Length = 138
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCV-----YCSTNCVCYCVFC 367
C + C C V CCV +C CV CV C
Sbjct: 6 CRVMRCVGCRVMCCVACFVMHCVACCVMRCVAC 38
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 450 CAFLNCRSCYVFCCVYCSTNCVCYCVFC 367
C + C +C V CV C CV CV C
Sbjct: 38 CCVMRCVACCVMRCVGC---CVMRCVAC 62
>SB_8793| Best HMM Match : C1_1 (HMM E-Value=0.21)
Length = 260
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Frame = -3
Query: 516 MQLSFRFIYSLCD----CVFGGFNERCAFL----NCRSCYVFCCVYCSTNCVCYCVFC 367
++L+F F+ LC C F+ RCAFL +C SC+ C + C FC
Sbjct: 163 VRLAFMFVALLCSLRLLCSLR-FHVRCAFLLVALSCSSCFYVHCAFVLVALSCSLRFC 219
>SB_53841| Best HMM Match : PhdYeFM (HMM E-Value=6.3)
Length = 87
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 8 VDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLA 187
V+ + +AS E T I + ++ V ++ A K+V AAVVEKG + G D
Sbjct: 12 VNLDQTESASKAENRDT-INTGQKRAVPAVLASLAANKDVQAAVVEKGIEVAGKIIDKQL 70
Query: 188 NT 193
T
Sbjct: 71 QT 72
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTI--VGTAK 175
ATV T AA+ + TTA +A T T + T+ AA + +T+ V TA
Sbjct: 615 ATV-TTVTTAAATLTTVTTA--AATLTTVTTAAATLTTVTTAAATLTTAAATVTTVTTAA 671
Query: 176 DTLAN-TVHTTVDTTKNVAASTVEKGA 253
TL T TT +AA+T+ A
Sbjct: 672 ATLTTVTTAAATLTTVTIAAATLTTAA 698
Score = 27.9 bits (59), Expect = 9.1
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGTTAIG-SAKETVANTVSTTVDATKNVAAAVVEKGS-TIVGTAK 175
ATV AA+ T A + T A TV+T A + + T V TA
Sbjct: 585 ATVTTVTTAAATVTTVTTAAATVTTVATAAATVTTVTTAAATLTTVTTAAATLTTVTTAA 644
Query: 176 DTLANTVHTTVDTTKNVAASTV 241
TL T TT T AA+TV
Sbjct: 645 ATL--TTVTTAAATLTTAAATV 664
>SB_422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +1
Query: 286 TTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIET 465
T TT+ AT + ++ + T+ I T T+ T++TT+ TT + + + T
Sbjct: 2 TANTTTITATITTTTTTITI-TATITTITTTITATITTTISTTTPFITATISTTITTTIT 60
Query: 466 AKDTVAQT 489
T+ T
Sbjct: 61 TTTTITTT 68
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/82 (20%), Positives = 35/82 (42%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEK 444
TA T TT T ++ ++ T+ I T + T+STT+ TT +
Sbjct: 9 TATITTTTTTITITATITTITTTITATITTTISTTTPFITATISTTITTTITTTTTITTT 68
Query: 445 GTSLIETAKDTVAQTVDKTKTE 510
T++ + T++ ++++
Sbjct: 69 TTTIYTITTTIIIITINISQSK 90
>SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 35 SAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLA 187
S +K +TAI SA TV + +TTV + ++ E+ ST GT ++ A
Sbjct: 435 SMAKKISTAITSAMSTVTTSFNTTVSSPTIKTTSIAEQNST-AGTISESEA 484
>SB_21597| Best HMM Match : ig (HMM E-Value=2.9e-14)
Length = 1931
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 23 NVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVE 145
NV + +EK T++ SA E +TV ATK+V A+ E
Sbjct: 746 NVLRAHLEKAETSLQSANEKFLSTVRQVGKATKDVQIALQE 786
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 59 AIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANTVHTTVDTTKNVAAST 238
A+G + TV +T ++T T V A + ++ T K A + H T T+ + ST
Sbjct: 427 AVGVNRTTVTDTATSTAVVTSTVLVA----STRLLSTVKTHTATSTHVTTATSTDTLTST 482
>SB_23862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3112
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +1
Query: 271 KDTVATTLNTTVDATKS-VASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKG 447
K ++ L +T+ S + + + KG+ ++ A AN ST + T + +A+
Sbjct: 2884 KANISKALASTMGLPVSRIVNMTLSKGSIVVNFALVAPANETSTDLKTYADKLNTAITSS 2943
Query: 448 TSLIETAKDTV-AQTVDKTKTELHQQ 522
T +ET+ T+ A + TE ++Q
Sbjct: 2944 TFTVETSSGTLKADPASFSTTEGNEQ 2969
>SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1346
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Frame = +1
Query: 271 KDTVATTLNT--TVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEK 444
K T+ T T + T +A + T AK+T T + T +TT+ A+
Sbjct: 1231 KATIVATEATKPATETTTEATIAATRRTTEATEVAKETTKATEAAT-ETTEATKAATKTT 1289
Query: 445 GTSLIETAKDTVAQTVDKTKTELHQQLIQACLMLALLKTP 564
K T T T+T+ QQ+ ++ + TP
Sbjct: 1290 TEETNAATKTTTEATNAATETQTTQQMQSVPSVITTVHTP 1329
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +1
Query: 271 KDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGT 450
+ V LN VDA S+ ++ + ++DT+ + V + + T + ++++GT
Sbjct: 1599 EQAVTRLLNCLVDAIMSLFANP----SLAAEVSRDTLKHLVQSMLTTVLDDRLVSLKEGT 1654
Query: 451 SLIETAKDTVAQTVDKT 501
+I T +A+ +D+T
Sbjct: 1655 QIIRTFNVLMAKIIDRT 1671
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Frame = +1
Query: 265 TAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTV---STTVDTTKNVAASA 435
TA T + +T T S V +GT++ D + TV ST T + S
Sbjct: 154 TAPRTTVLSESTAAPGTTVATESTVTRGTTVASGGTDALVTTVSPESTLTPGTTVLPEST 213
Query: 436 VEKGTSLIETAKDTVAQTVDKTKTELHQQLI 528
V G ++ T TV T+ ++
Sbjct: 214 VAPGIAVASEITVTRGTTVASESTDSESTIV 244
>SB_31497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +1
Query: 253 LLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAAS 432
LL +T+ + +NT +D + ++ ++ T L D++ + T+D+ N S
Sbjct: 53 LLTELFTNTLDSLINT-LDLLTELFTNTLDSLTELFTNTLDSLTELFTNTLDSLINTLDS 111
Query: 433 AVEKGTSLIETAKDTVAQTVD 495
+ SLI T D++ T+D
Sbjct: 112 LINTLDSLINTL-DSLTNTLD 131
>SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 768
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/65 (21%), Positives = 30/65 (46%)
Frame = +2
Query: 47 KGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANTVHTTVDTTKNV 226
+GT + + T+ ++D KN+ +G+ + + L T+ ++DT KN+
Sbjct: 453 EGTDVYPHNRSALVRTIGKSIDTLKNI------EGTGVYTLNRSALVRTIGKSIDTLKNI 506
Query: 227 AASTV 241
+ V
Sbjct: 507 EGTGV 511
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 259 IGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTA---KDTVANTVSTTVDTTKNVAA 429
I TAK T + + T ++A T+++ T+ + T A+ + +TT A
Sbjct: 722 IATAKTTAEPEITVAPETTMVPETTAAPATTAVLETSIVPETTAASETTVAPETTDAPAT 781
Query: 430 SAVEKGTSLIETAKDTVAQTVDKTKTEL 513
+ K T+ +ET V +T L
Sbjct: 782 TLAPKTTTALETTVAAKTTVVPETTPAL 809
>SB_926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -1
Query: 716 FVCSGCSYVLRCVYGFSQRAFSTVNERRSFVICRSRCIFGQIYCA-----MNCICYGVFS 552
FV S VLR V+ V R S V+ R RCI Q+YCA + CI ++
Sbjct: 30 FVFYRFSLVLRFVFYRFSLVLRFVFYRFSLVM-RLRCIGSQLYCACVLSVLTCIALALYR 88
Query: 551 SASIRQACI 525
+ + + C+
Sbjct: 89 FSLVLRLCL 97
>SB_43232| Best HMM Match : Morbilli_P (HMM E-Value=4.2)
Length = 362
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 35 SAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTL 184
S +K +TAI SA TV + +TTV + ++ E+ ST GT +++
Sbjct: 40 SMAKKISTAITSAMSTVTTSYNTTVSSPTIKTTSISEETST-AGTISESM 88
>SB_30912| Best HMM Match : SEA (HMM E-Value=1.1)
Length = 354
Score = 28.3 bits (60), Expect = 6.9
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +1
Query: 247 GRLLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKN 420
G+ + T KD+VAT N VD K S A EK + T KD+V +T +V T KN
Sbjct: 227 GKNSVDTEKDSVATEKN-PVDTEKD--SVATEKNP--VDTEKDSV-DTEKDSVATEKN 278
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 2 ATVDATKNVAASAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDT 181
+T AT A + TTA +E+ +TTV ATK +++ E+ ST++ T T
Sbjct: 248 STTTATTTKATTTSVSTTTATTKEEESTTTAETTTVTATKPLSS---EETSTMLPTTAPT 304
>SB_45751| Best HMM Match : HlyIII (HMM E-Value=0.0006)
Length = 198
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -1
Query: 695 YVLRCVYGFS-QRAFSTVNE--RRSFVICRSRCIFGQIYCAMNCICYGV 558
Y CVY FS +AF + + FV+ S +F + M+C+C V
Sbjct: 138 YAAICVYSFSGSQAFFFYSRPSQTDFVLLSSPTVFLTVSAIMSCLCTAV 186
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = +1
Query: 250 RLLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAA 429
++L+G +D + NT++ +S E+G +L S T D K+V +
Sbjct: 112 KILVGNKRDLRSAQQNTSLSNHRSRDPITYEEGKALAKRLGMQYLENSSLTQDGVKDVMS 171
Query: 430 SAVEKGTSLIE 462
+A+ G ++
Sbjct: 172 AAIRVGAGHVQ 182
>SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)
Length = 779
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -3
Query: 423 YVFCCVYCSTNCVCYCVFCGTD*RCAFFYSRARYTFRSIYGCV*SGCYSVFSS 265
Y C +TN CY V C T YS R T + C + C ++ +S
Sbjct: 269 YSVMCATVATNTKCYSVTCATVATNTKCYSATRATMATNTKCYSATCATMATS 321
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Frame = +1
Query: 277 TVATTLNT---TVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKG 447
T A+ +N T A K+ +S + + TVA + +TT +A
Sbjct: 303 TTASEINVASKTTAAPKTTTASEINVANKTTAAHETTVATKTTAAPETTSVPETTATNTA 362
Query: 448 TSLIETAKDTVA-QTVDKTKTELHQQ 522
K T A +T D +KT + Q
Sbjct: 363 PDKTAVPKTTTAPETTDASKTTVETQ 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,473,482
Number of Sequences: 59808
Number of extensions: 326423
Number of successful extensions: 1540
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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