Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0027
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           31   0.037
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           31   0.049
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.2  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.4  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 31.1 bits (67), Expect = 0.037
 Identities = 19/76 (25%), Positives = 33/76 (43%)
 Frame = +1

Query: 328 SSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTVAQTVDKTKT 507
           ++ V   T+ +     TVA T +TTV  T     +  +  T+ + +   T   + D T  
Sbjct: 26  TTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTP 85

Query: 508 ELHQQLIQACLMLALL 555
               Q ++A L+  LL
Sbjct: 86  SSAPQDVKAALVPVLL 101



 Score = 29.5 bits (63), Expect = 0.11
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +1

Query: 301 TVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTV 480
           TV    +V S  ++  T+ +  A  TVA T +T   TT    A       +  +T   TV
Sbjct: 10  TVCVLLAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTV 69

Query: 481 A 483
           A
Sbjct: 70  A 70



 Score = 29.5 bits (63), Expect = 0.11
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +2

Query: 35  SAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANTVHTTVDT 214
           + +   TT +     TVA T +TTV  T     A  +  +T V +   T   +  TT  +
Sbjct: 27  TTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPS 86

Query: 215 T 217
           +
Sbjct: 87  S 87



 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 277 TVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTT 414
           TVA T  TTV  T +   +  +  T+ + +   T   +  TT  ++
Sbjct: 42  TVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSS 87


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 30.7 bits (66), Expect = 0.049
 Identities = 18/68 (26%), Positives = 27/68 (39%)
 Frame = +2

Query: 35  SAIEKGTTAIGSAKETVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANTVHTTVDT 214
           + +   TT +     TVA T +TTV  T     A  +  +T V   + T        V T
Sbjct: 27  TTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTTTTTVASGPVTT 86

Query: 215 TKNVAAST 238
           T +   +T
Sbjct: 87  TGSTDTTT 94



 Score = 30.3 bits (65), Expect = 0.065
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = +1

Query: 301 TVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTV 480
           TV    +V S  ++  T+ +  A  TVA T +T   TT    A       +  +T   TV
Sbjct: 10  TVCVLLAVTSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTV 69

Query: 481 AQTVDKTKT 507
           A     T T
Sbjct: 70  APGQTTTTT 78



 Score = 28.3 bits (60), Expect = 0.26
 Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
 Frame = +1

Query: 253 LLIGTAKDTVATTLNTTVDATKSVASSAVEKGTSLIGTAKDTVANTVSTTV--DTTKNVA 426
           +L+      +     T   AT +VA +     T++  T   TVA T +TTV    T    
Sbjct: 13  VLLAVTSGQIDPPTTTVAPATTTVAPTT----TTVAPTTTTTVAPTTTTTVAPGQTTTTT 68

Query: 427 ASAVEKGTSLIETAKDTVAQTVDKTKTELHQQLIQACLMLALL 555
            +  +  T+ + +   T   + D T      Q ++A L+  LL
Sbjct: 69  VAPGQTTTTTVASGPVTTTGSTDTTTPSSAPQDVKAALVPVLL 111


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
 Frame = -3

Query: 462 FNERCAFLNCRSCYVFCC---VYCSTNCVCY 379
           +N  C F  C  C    C   + C  NC CY
Sbjct: 772 YNTHC-FALCHCCEFDACDCEMTCPNNCACY 801


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -1

Query: 653 STVNERRSFVIC--RSRCIFGQIYC 585
           S  +E R+  IC  R  CI GQ YC
Sbjct: 524 SVGDELRTGPICSDRGECICGQCYC 548


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,287
Number of Sequences: 2352
Number of extensions: 10928
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)