Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0026
(629 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 68 7e-12
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 64 9e-11
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 64 1e-10
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 62 4e-10
05_01_0103 + 686770-687017,687120-687270 61 8e-10
03_06_0479 + 34217170-34217172,34217337-34217786 58 4e-09
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 57 1e-08
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 55 5e-08
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 48 8e-06
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 38 0.005
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 31 0.75
12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665 30 1.3
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 29 4.0
08_01_0661 - 5708088-5708131,5708217-5710048,5710527-5710625,571... 28 5.3
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 28 5.3
05_07_0055 - 27374028-27374080,27374205-27374295,27374930-273754... 27 9.3
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 27 9.3
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 67.7 bits (158), Expect = 7e-12
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T E +K K+F +SW PDT++V+ KMLY+SS D K+ L G+Q +QATD SE S + V+
Sbjct: 95 TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVK 154
Query: 457 EK 462
+
Sbjct: 155 SR 156
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 220
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 221 TGECRYGLFDFD 256
ECRY +FDFD
Sbjct: 81 ADECRYAVFDFD 92
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T+E K ++F + W PD AKV+ KMLY+SS + KK L G+Q +QATD E S +A++
Sbjct: 95 TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALK 154
Query: 457 EKLR 468
++++
Sbjct: 155 DRVK 158
Score = 60.9 bits (141), Expect = 8e-10
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 220
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G+R YE F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 221 TGECRYGLFDFD 256
G+CR+ ++DFD
Sbjct: 82 -GDCRFAIYDFD 92
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T E +K K+F SW PDTA+ + KMLY+SS D ++ L G+Q IQATD SE S + +
Sbjct: 82 TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIR 141
Query: 457 EK 462
+
Sbjct: 142 AR 143
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 50 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTG 226
G+ V+D CK ++E+K + R++VF I D+ +I VE +G+ YE F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 227 ECRYGLFDFD 256
ECRY ++D D
Sbjct: 70 ECRYAVYDLD 79
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 220
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 221 TGECRYGLFDFD 256
+CRY ++DFD
Sbjct: 69 -SDCRYAIYDFD 79
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 456
T E +K K+F ++W P ++++ KMLY++S + ++ L GV IQATD SE E +
Sbjct: 82 TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLR 141
Query: 457 EK 462
E+
Sbjct: 142 ER 143
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 60.9 bits (141), Expect = 8e-10
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAV 453
T E +K K+F ++W PDT++V+ KM+Y+SS D K+ L G+Q +QATD +E + +
Sbjct: 69 TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVI 127
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 53 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 229
+ V D CK + E+K + +R++++ I ++K+ + VE VGE Y+ F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 230 CRYGLFDFD 256
CRY +FD+D
Sbjct: 58 CRYAIFDYD 66
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +2
Query: 47 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGT 223
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +++ L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 224 GECRYGLFDFD 256
CRY ++D D
Sbjct: 65 --CRYAVYDHD 73
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +1
Query: 274 GTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAV 453
G + + K+F +SW P A V+ KM+Y+SS + KK L GVQ +QATD SE + + +
Sbjct: 86 GEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVL 145
Query: 454 EE 459
++
Sbjct: 146 KD 147
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 FLRE*HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQ 193
F+R H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G Y+
Sbjct: 3 FMRS-HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDD 61
Query: 194 FLEDLQKGGTGECRYGLFDFD 256
FL L + +CRY L+DFD
Sbjct: 62 FLASLPEN---DCRYALYDFD 79
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQ 444
T E +K K+F ++W P T++++ KMLYS+S D +K+ L G IQATD +E Q
Sbjct: 82 TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTETPQ 137
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 44 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 220
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 221 TGECRYGLFDFD 256
ECRY +FDFD
Sbjct: 326 ASECRYAVFDFD 337
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +1
Query: 277 TSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQ 405
T E +K K+F +SW PDT+KV+ KMLY+SS D K+ L G+Q
Sbjct: 340 TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQ 382
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 53 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTGE 229
+ V + K+ + E+K+ K HRYV+F I D + +I VE G Y+ F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 230 CRYGLFDFD 256
CRY ++D D
Sbjct: 77 CRYAVYDLD 85
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 292 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRA 471
+K K+F +SW P ++++ K +Y+ S + + L GV IQATD + E + +
Sbjct: 93 RKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANR 152
Query: 472 T 474
T
Sbjct: 153 T 153
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 292 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRA 471
+K K+F +SW P + ++ K +Y+ + + L GV IQATD + E + +
Sbjct: 109 RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANR 168
Query: 472 T 474
T
Sbjct: 169 T 169
Score = 34.7 bits (76), Expect = 0.061
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 53 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDL 208
+ V + K+ + E+ + K HRYV+F I D + +I VE G Y+ F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 372 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARTKPNPLSDTP 539
R +E V RS HPS R G + R RH S + Y RT+ +P S TP
Sbjct: 644 RAAEGVRHRSRTPHPSGRQRAHGDGRQGRSQTRHSSRCSCRYRSRRTR-SPSSLTP 698
>12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665
Length = 366
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -2
Query: 472 WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTS 311
WR +SLRRP LPR R L C S++ + S P+RCP TTTS
Sbjct: 225 WR-SSLRRP---LPR-RHL-CVSDIGIDSASISSFSPAHLRLDHPFRCPATTTS 272
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 378 SEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 494
+E R E P R G+ +GGRRR+A +R + I
Sbjct: 5 AESCGSRGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
>08_01_0661 -
5708088-5708131,5708217-5710048,5710527-5710625,
5711015-5711508,5711579-5711632,5712597-5712683,
5712684-5712776
Length = 900
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 409 YIQATDLSEASQEAVEEKLRATDRQ*TAFTHELGRNRT 522
YIQ + ++E S+E ++ K +D Q +A H G+N T
Sbjct: 753 YIQYSYVNEQSKEILDHKNNCSDIQISAPLHNKGQNST 790
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 80 TYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 226
T +++ +D+ + ++ EK D E + E NA YE+ + L+ G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187
>05_07_0055 -
27374028-27374080,27374205-27374295,27374930-27375448,
27375544-27375779,27376363-27376846,27376993-27378282
Length = 890
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 89 LRKWSCKRPKLSHQTP 42
L +W C RPK H TP
Sbjct: 54 LEEWQCARPKTRHPTP 69
>05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 481 GDRWRGAS--LRRPPETLPRGRSLGCTSELRQGTFSERR 371
GD+W A + P PR + +S++++ FSERR
Sbjct: 971 GDQWMKADDVVEETPRMAPRAKRSAYSSDVQEVDFSERR 1009
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,843,204
Number of Sequences: 37544
Number of extensions: 322688
Number of successful extensions: 1207
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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