Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0026
(629 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 52 3e-07
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) 47 1e-05
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 37 0.016
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_58318| Best HMM Match : K-box (HMM E-Value=5.6) 31 1.0
SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61) 30 1.3
SB_14686| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 28 5.4
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48) 28 5.4
SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012) 27 9.5
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/62 (35%), Positives = 40/62 (64%)
Frame = +1
Query: 283 EASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 462
E + + KL L+ WCPD ++K +M+ +++F +KK G K ++ + SE S EA++E+
Sbjct: 323 EGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKKCPGGAKCLEIQERSELSFEALKEE 382
Query: 463 LR 468
L+
Sbjct: 383 LK 384
>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +1
Query: 283 EASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 462
E +++ KL L+ WCPD +K KM+ +++F + K G K ++ D + S EA++EK
Sbjct: 76 EGAERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCPGGAKCLEIQDRFDLSFEALKEK 135
Query: 463 LR 468
L+
Sbjct: 136 LK 137
>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
Length = 310
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 262 HQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 435
H+ Q A FL C D A +KKKML S+++ LKK G++KY +A+++ E
Sbjct: 241 HKTQDHRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICE 298
>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
Length = 151
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 304 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRAT 474
L +SWC D A ++KKM +S+ D ++K + A D + + + K T
Sbjct: 93 LVFISWCSDKAPIEKKMKLASTQDYVRKKFSEATTSVNANDFDDLDYDEIAAKAEKT 149
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = +2
Query: 47 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 205
SG+ V D + +K K H+Y +F I DE + V ++V E ++ F +
Sbjct: 4 SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63
Query: 206 LQKGGTGECRYGLFD 250
++K E RY L+D
Sbjct: 64 VEKLSDREPRYILYD 78
>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +1
Query: 304 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 462
L + WC D A +KK+M+ +++ + LK V V+K Q D ++ + + + +K
Sbjct: 93 LVYIFWCSDNAPIKKRMVSAATNELLKTKFV-VKKVFQINDRADLNYDDIADK 144
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Frame = +2
Query: 47 SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 193
SG+ + D Y+ ++ K+K H++ F I D+ K++D T E A ++Q
Sbjct: 4 SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63
Query: 194 FLEDLQKGGTGECRYGLFDFD 256
LE L E RY L+D +
Sbjct: 64 MLEKL---SDSEPRYILYDLN 81
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 31.5 bits (68), Expect = 0.58
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 396 RSSEVHPSDRP-LGSVSGGRRREAPRHRSPINS-IYTRARTKPNPLSDTPALTTRGHDTT 569
RSS + P R LGS++ R PR RS + S +R RT P + + ++R
Sbjct: 183 RSSSISPGMRSSLGSIAPPPRTSTPRSRSTLRSRAGSRIRTPSTPTTTSSRASSRESARG 242
Query: 570 SRLVLITKE 596
+R TK+
Sbjct: 243 TRTTTTTKK 251
>SB_58318| Best HMM Match : K-box (HMM E-Value=5.6)
Length = 584
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 447 GRRREAPRHRSPINSIYTRARTKPNPLSDTPALTTRGHDTTS 572
GRR++ P P NS+++ R +P+ + A T RG D ++
Sbjct: 65 GRRQKGPESLDPENSLFSLRRRRPSSFPNVDA-TLRGQDISA 105
>SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61)
Length = 1226
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 472 WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTT 317
W G + R PP RS+ TS L TF ERR W P T+
Sbjct: 855 WGGTAERPPPRQSAPSRSMAITSLLCGSTF-ERRTTVLSMGVVSDWSIPATS 905
>SB_14686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 29.1 bits (62), Expect = 3.1
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = -1
Query: 626 VKSIILILFVFLCN*Y*AASGVVAACRQGRSVGERVRFRPSSCVNAVYWRSVARSFSSTA 447
V ++ILI+ ++ CN S ++ +G + +P + V + SF S
Sbjct: 48 VSNLILIIAIWSCNSMRTPSNIIICSLACSDIGVGLLAQPLAVAKTVIEAKASSSFDSFC 107
Query: 446 S*DASERSVAWMYF*TPTRDFFRASNELEYNIFFLTLAVSGHHDIRKSFCFLL 288
S S R V+ +YF + F A + +Y + L L R+ FLL
Sbjct: 108 SIHKSSR-VSSVYFCVVSFVCFTAVSLDKYLMVLLHLRYHELVTTRRVIVFLL 159
>SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -2
Query: 334 RCPGTTTSG-RASVSC*PPTCPGTGACIK 251
+CP T + G R V C P CP T C K
Sbjct: 484 QCPKTLSCGHRCGVECHPGACPDTLVCSK 512
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -2
Query: 466 GASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTSGRAS 299
G + R PP R + TS L TF ERR W P T +G AS
Sbjct: 651 GTAERLPPRQSAPSRFMAITSLLCGSTF-ERRTTVLSMGVVSDWSVPATRCAGTAS 705
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 396 RSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARTKPNPLSDTPALTT 551
R PS LGS++ R PR RS S +R+RT+ TP+ T+
Sbjct: 1344 RQQRRRPSPSSLGSLAPPSRTSTPRSRSTPRS-RSRSRTRTPSTPFTPSTTS 1394
>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
Length = 643
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 177 TPNTNSSSRICRRAVPGNADMAC 245
+P T SSR C VPG+AD C
Sbjct: 14 SPRTGRSSRSCSIPVPGHADHHC 36
>SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1690
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 373 DALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELGRNRTRSPTLLP*RH 552
D LKK + +QK +L +AS E EEK + + + F H++ N+ + +P RH
Sbjct: 403 DGLKKRMEQIQK-----ELQQASSELEEEKKKTENLLSSIFPHDVA-NKLINKQPIPARH 456
>SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
Length = 816
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 171 NATPNTNSSSRICRRAVPGNADMACL--TLIHAPVPGHVGG*QETEALPDVVVPGH 332
N NT+++SR AV G D CL T++H P V T++L DVV+ H
Sbjct: 137 NMDMNTDTNSRGPHPAVTGFCDQFCLTNTIVH---PTRVA--SSTKSLLDVVLVSH 187
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 27.5 bits (58), Expect = 9.5
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +3
Query: 372 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARTKPNPLSDTPALTT 551
RRS + PCR S +D LG R R SP S T + + AL
Sbjct: 238 RRSSEAPCRQSRRSSNDARLGQFVEKRNFHGNRFVSPKKSKKTEVNREDSIEQYLEALQQ 297
Query: 552 RGHDTTSRLVL 584
+TSRL L
Sbjct: 298 EA--STSRLKL 306
>SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -3
Query: 492 CCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS---VERARVQHLLLNLGG 331
CC+L + E L + +GR D + + G F + R +HL+ +GG
Sbjct: 85 CCILRMSMTEALAGATINAAASLGRADTHGSLEVGKFADMVVINAERWEHLIYQIGG 141
>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -3
Query: 498 CKCCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS 376
C CLL G + L DGL RR G ++VLL D G +S
Sbjct: 348 CIACLLFGGSRKRLPDGLTRR----GDINVLLLGDPGTAKS 384
>SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 567 WCRGRVSSGQECRRAGSVS 511
W RGR SS +CRR S S
Sbjct: 888 WPRGRASSKNDCRRCSSCS 906
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 262 ACIKVKQAISAFPGTALLQILEELFVFGVAFANRLDVDLFLVTDV 128
ACIK + +LQ +E F+ + F+ + + D+F+V D+
Sbjct: 4146 ACIKKDAVRNVLRELEILQTIEHPFIVNLWFSFQDEEDIFMVVDL 4190
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,202,874
Number of Sequences: 59808
Number of extensions: 367475
Number of successful extensions: 1317
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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