Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0026
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 61 6e-10
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 61 6e-10
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 48 7e-06
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 47 1e-05
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 47 1e-05
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 33 0.17
AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical... 29 2.7
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 29 3.6
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 28 6.3
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 28 6.3
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 27 8.4
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 27 8.4
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 27 8.4
AF067616-4|AAC19193.1| 373|Caenorhabditis elegans Hypothetical ... 27 8.4
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ... 27 8.4
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = +2
Query: 41 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 214
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 215 -GGTGECRYGLFDFD 256
ECRY D +
Sbjct: 61 VEDGKECRYAAVDVE 75
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +1
Query: 259 THQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLS 432
T Q QG S K+ + +CPD A V+++MLY+SS ALK SL G++ +QA+++S
Sbjct: 77 TVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMS 135
Query: 433 EASQEAVEEKLRATDR 480
+ +++V+ L + R
Sbjct: 136 DLDEKSVKSDLMSNQR 151
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = +2
Query: 41 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 214
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 215 -GGTGECRYGLFDFD 256
ECRY D +
Sbjct: 61 VEDGKECRYAAVDVE 75
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +1
Query: 259 THQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLS 432
T Q QG S K+ + +CPD A V+++MLY+SS ALK SL G++ +QA+++S
Sbjct: 77 TVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMS 135
Query: 433 EASQEAVEEKLRATDR 480
+ +++V+ L + R
Sbjct: 136 DLDEKSVKSDLMSNQR 151
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +1
Query: 265 QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEA 438
Q SE S K+ L++ CPD A V+++MLY+SS ALK SL G++ +QA+++S+
Sbjct: 142 QVSDESEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 197
Query: 439 SQEAVEEKLRATDR 480
+++V+ L + R
Sbjct: 198 DEKSVKSDLMSNQR 211
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 289 SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGVQKYIQATDLSEASQE 447
SK K+ + CPD A +KKKM+Y+SS A+K SL G Q +D SE S +
Sbjct: 99 SKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK 152
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 17/88 (19%)
Frame = +2
Query: 41 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 178
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 179 -AEYEQFLEDLQK--GGTGECRYGLFDF 253
A +++F+ED++ +CRY +FDF
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDF 87
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 289 SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 465
SK K+ + CPD A +KKKM+Y+SS A+K SL G Q +D SE S + + KL
Sbjct: 99 SKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 17/88 (19%)
Frame = +2
Query: 41 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 178
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 179 -AEYEQFLEDLQK--GGTGECRYGLFDF 253
A +++F+ED++ +CRY +FDF
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDF 87
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 289 SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 465
SK K+ + CPD A +KKKM+Y+SS A+K SL G Q +D SE S + + KL
Sbjct: 99 SKMDKIIFLQICPDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 17/88 (19%)
Frame = +2
Query: 41 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 178
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 179 -AEYEQFLEDLQK--GGTGECRYGLFDF 253
A +++F+ED++ +CRY +FDF
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDF 87
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 199 RGSAEGRYRGMQIWPV*L*-YTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLY 360
R G+Y G + +P L + H G+ E + +F S PD+ K KKK+LY
Sbjct: 141 RPKVNGKYEGAEEYPDELAVFIHSLCGSHEIHPVKIIFRFSKYPDSLKYKKKILY 195
>AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical
protein Y50D7A.10 protein.
Length = 138
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +1
Query: 268 CQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE 447
C+ S+ + L+ +CP+ + + +MLY+ S + + V K + D+ E E
Sbjct: 74 CKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNE-CHVSKNTEIRDIDEIDDE 132
Query: 448 AVEEK 462
+E K
Sbjct: 133 LLESK 137
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 246 NRPYLHSPVPPFCRSSRNCSYSALRSPTVST 154
N P HSP PPF S N SY+ ++ T +T
Sbjct: 191 NIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 246 NRPYLHSPVPPFCRSSRNCSYSALRSPTVST 154
N P HSP PPF S N SY+ ++ T +T
Sbjct: 191 NIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 429 LGSVSGGRRREAPRHRSPINSIYTRARTKPNPLS 530
L ++S R+ P R P+ ++Y R + P P S
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPAS 721
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 429 LGSVSGGRRREAPRHRSPINSIYTRARTKPNPLS 530
L ++S R+ P R P+ ++Y R + P P S
Sbjct: 688 LTALSSSRKDPIPAPRGPVAAVYARGKDIPTPAS 721
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 478 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 386
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 478 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 386
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 478 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 386
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>AF067616-4|AAC19193.1| 373|Caenorhabditis elegans Hypothetical
protein F29C4.6 protein.
Length = 373
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 534 CRRAGSVSSELVCKCCLLAIG 472
C R G ++S+ +CK CLL G
Sbjct: 289 CERCGYMTSQKLCKACLLIEG 309
>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
protein Y76B12C.2 protein.
Length = 1119
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 405 EVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARTKPNPLSDTP 539
E PS+ P+ G ++ EAP +P+ T+ TKP+ +P
Sbjct: 23 EPQPSEPPVKRARGAKKNEAP-STAPMPPKTTKKSTKPSRKQGSP 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,162,198
Number of Sequences: 27780
Number of extensions: 260797
Number of successful extensions: 952
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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