Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0025
(664 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 24 1.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.6
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 3.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 4.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 7.9
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.8 bits (49), Expect = 1.5
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -2
Query: 150 YKNTLNWRYACSLNVIWYLCW 88
Y + W A +L ++W LC+
Sbjct: 168 YVGNIRWELAGTLLLVWILCY 188
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 315 YPHFGSGNGSITICSNCK*SYNIESQKLYHNI 220
Y ++ + N + +N +YN +KLY+NI
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNI 355
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 2.6
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -2
Query: 141 TLNWRYACSLNVIWYLCW 88
++ W A +L V+W +C+
Sbjct: 204 SIRWELAGTLAVVWIMCY 221
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 2.6
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = -2
Query: 141 TLNWRYACSLNVIWYLCW 88
++ W A +L V+W +C+
Sbjct: 257 SIRWELAGTLAVVWIMCY 274
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 294 NGSITICSNCK*SYNIESQKLYHNI 220
N +I +N K +YN +KLY+NI
Sbjct: 87 NKTIHNNNNYKYNYNNNCKKLYYNI 111
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 562 NYHSYQ*KCNTTYQRYEY 615
NY++Y NT Y++ +Y
Sbjct: 93 NYNNYNNNYNTNYKKLQY 110
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 562 NYHSYQ*KCNTTYQRYEY 615
NY++Y NT Y++ +Y
Sbjct: 93 NYNNYNNNYNTNYKKLQY 110
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 562 NYHSYQ*KCNTTYQRYEY 615
NY++Y NT Y++ +Y
Sbjct: 93 NYNNYNNNYNTNYKKLQY 110
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 562 NYHSYQ*KCNTTYQRYEY 615
NY++Y NT Y++ +Y
Sbjct: 93 NYNNYNNNYNTNYKKLQY 110
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 562 NYHSYQ*KCNTTYQRYEY 615
NY++Y NT Y++ +Y
Sbjct: 93 NYNNYNNNYNTNYKKLQY 110
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 562 NYHSYQ*KCNTTYQRYEY 615
NY++Y NT Y++ +Y
Sbjct: 93 NYNNYNNNYNTNYKKLQY 110
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 562 NYHSYQ*KCNTTYQRYEY 615
NY++Y NT Y++ +Y
Sbjct: 97 NYNNYNNNYNTNYKKLQY 114
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 562 NYHSYQ*KCNTTYQRYEY 615
NY++Y NT Y++ +Y
Sbjct: 93 NYNNYNNNYNTNYKKLQY 110
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 147 KNTLNWRYACSLNVIWYLCWKTK 79
KN + Y SL+ +W L W+ +
Sbjct: 590 KNPVQLWYVPSLDQVWILNWRNQ 612
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 269 IVSNHTILNHRNCIITSKVYKQRVRTALHN 180
I +NH L+ C S + K R+ LH+
Sbjct: 124 IYANHCELHRAACHSGSSLTKSRLMRCLHH 153
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.0
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = -1
Query: 520 YREWSESGALRLT*VGEGRHASSAAGASETEHPHTLQYGLVSIYSN*SIQVYNSTYYTMF 341
YR++ E+ R E R S +P + Y + Y+N + YN YY +
Sbjct: 56 YRKYRETSKERSRNRTE-RERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
Query: 340 Y 338
Y
Sbjct: 115 Y 115
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 300 SGNGSITICSNCK*SYNIESQKLYHNI 220
S N + + +N +YN ++KLY+NI
Sbjct: 86 SNNYNYSNYNNYNNNYNNYNKKLYYNI 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,803
Number of Sequences: 438
Number of extensions: 3949
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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