Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0024
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.63 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.4  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 176 YYQSRQCDFWTIIGKSE-KRIIDFVFHCSHKTLLNDILDK*Q 298
           Y++ +  DFW     S  +    F+++C H TLL  IL + Q
Sbjct: 121 YWRQQYEDFWHRYTLSFIENYCQFLYNCFHSTLLLMILSRYQ 162


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -2

Query: 438 VYYQR-WQSVHLDKKNVI 388
           VY  R WQ +HL+KK ++
Sbjct: 531 VYNHRPWQQLHLNKKQIL 548


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 133 LNGWTSSRPTGVKWLPESIGISNANAVTHL 44
           +  W+  RP   K+ PE I   N +  TH+
Sbjct: 528 ITSWSQKRPGAGKFTPEDI---NPSLCTHI 554


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,054
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)