Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0024
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096300-1|BAC04754.1|  492|Homo sapiens protein ( Homo sapiens ...    31   3.2  

>AK096300-1|BAC04754.1|  492|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38981 fis, clone NT2RI2005096, moderately
           similar to Homo sapiens p53 regulated PA26-T2 nuclear
           protein (PA26) mRNA. ).
          Length = 492

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = -1

Query: 607 SFRDAQFYLWSRHSKGHINRSLNYTSTLLSTVFYICVNL-FGKVSGIEDMSN*VYMSRLL 431
           +FR AQ Y W  H    +NR  +    LL   F +  NL +  ++  ED+     + R L
Sbjct: 348 TFR-AQDYTWENHGFSLVNRLYSDIGHLLDEKFRMVYNLTYNTMATHEDVDT-TMLRRAL 405

Query: 430 SKVAICAFGQKKCY*YVNTD*FQYNRLLQR 341
                C FG +    Y + D  + N+LL+R
Sbjct: 406 FNYVHCMFGIR----YDDYDYGEVNQLLER 431


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,519,232
Number of Sequences: 237096
Number of extensions: 1846465
Number of successful extensions: 5937
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5937
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)