Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0024
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78063-1|CAB01504.1|  161|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U97189-9|AAC48161.1|  263|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z78063-1|CAB01504.1|  161|Caenorhabditis elegans Hypothetical
           protein F45D3.1 protein.
          Length = 161

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 577 SRHSKGHINRSLNYTSTLLSTVFYICVNL 491
           S+ S+G INR L YT  +    F++ +NL
Sbjct: 128 SKKSRGPINRKLKYTYIMAKADFFVDINL 156


>U97189-9|AAC48161.1|  263|Caenorhabditis elegans Hypothetical
           protein C48B6.9 protein.
          Length = 263

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -1

Query: 586 YLWSRHSKGHINRS--LNYTSTLL 521
           Y W+ HS GH+ R    NY STL+
Sbjct: 240 YFWANHSCGHVYREDCYNYLSTLV 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,687,053
Number of Sequences: 27780
Number of extensions: 310661
Number of successful extensions: 528
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)