Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0020
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical pr... 87 8e-18
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 32 0.30
AC006714-18|AAK29722.2| 90|Caenorhabditis elegans F-box a prot... 29 3.7
AC006714-14|AAK29720.2| 264|Caenorhabditis elegans F-box a prot... 29 3.7
Z68314-3|CAA92656.2| 334|Caenorhabditis elegans Hypothetical pr... 28 4.9
U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL161712-12|CAC70144.1| 789|Caenorhabditis elegans Hypothetical... 27 8.6
>U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical
protein F55A4.1 protein.
Length = 214
Score = 87.4 bits (207), Expect = 8e-18
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = +1
Query: 268 SPMRCSIETGPYLFHYLIENHICYLVLCERNYSKRLAFNYLEEIAQEFFQQYGHRLNTVT 447
+P + S+E+GP++FHY+I +IC LVLC+RN+ +++AF YL +I QEF + R+ V
Sbjct: 48 APAQQSVESGPFVFHYIIVQNICALVLCDRNFPRKVAFQYLSDIGQEFLNENSSRIEQVV 107
Query: 448 RPYTFIEFD 474
RPY F+EFD
Sbjct: 108 RPYHFLEFD 116
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +2
Query: 137 MTMIARVADGLPLAATMQ--EDEQSACNILEYQNQAKMLFR 253
+T+IARV DGL LA +++ D ++++Y NQAKMLF+
Sbjct: 3 LTLIARVRDGLILATSIEGNNDGSGDSSMVKYSNQAKMLFK 43
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 633 SPSPASTSC*DTWRPSGTSATSSIGFCVFVSS-SDSIAPLCS 511
+PS ASTS T +PSGTS S G C S+ S SI + S
Sbjct: 622 APSGASTSGASTSKPSGTSPESGAGVCTGPSTRSQSITSVAS 663
>AC006714-18|AAK29722.2| 90|Caenorhabditis elegans F-box a protein
protein 208 protein.
Length = 90
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 104 VRDILTLNMVLMTMIARVAD---GLPLAATMQEDEQSACNILEYQNQAKMLFRN*ALSPR 274
+RDIL N + R+A+ G+P A + + + + N++ Y+N + F + +L R
Sbjct: 28 IRDILLNNATFQNCVIRIAEWKTGIPEIAKVFQPDYTDGNLIRYRNSFTISFTSHSLCIR 87
>AC006714-14|AAK29720.2| 264|Caenorhabditis elegans F-box a protein
protein 77 protein.
Length = 264
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 104 VRDILTLNMVLMTMIARVAD---GLPLAATMQEDEQSACNILEYQNQAKMLFRN*ALSPR 274
+RDIL N + R+A+ G+P A + + + + N++ Y+N + F + +L R
Sbjct: 202 IRDILLNNATFQNCVIRIAEWKTGIPEIAKVFQPDYTDGNLIRYRNSFTISFTSHSLCIR 261
>Z68314-3|CAA92656.2| 334|Caenorhabditis elegans Hypothetical
protein F07H5.10 protein.
Length = 334
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 603 DTWRPSGTSATSSIGFCV-FVSSSDSIAPLCSTR 505
D P+G A I + + S +DS+AP CSTR
Sbjct: 9 DNRPPTGVRAKPVINLNIEYTSCNDSVAPACSTR 42
>U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical
protein C25F6.4 protein.
Length = 767
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 360 VSFTQDQITYVIFNQIMEEIRAGFNGTSHR 271
V F+QD T+ +F+QI R N TS R
Sbjct: 287 VIFSQDGKTFPLFSQISSSERQSLNNTSRR 316
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 289 ETGP--YLFHYLIENHICYLVLCERNYSKRLAFNYLEE 396
ETG Y FH + ENH + LC R Y+ + + E
Sbjct: 267 ETGEDIYKFHVMDENHDISINLCMREYANLHSITFTRE 304
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 289 ETGP--YLFHYLIENHICYLVLCERNYSKRLAFNYLEE 396
ETG Y FH + ENH + LC R Y+ + + E
Sbjct: 197 ETGEDIYKFHVMDENHDISINLCMREYANLHSITFTRE 234
>AL161712-12|CAC70144.1| 789|Caenorhabditis elegans Hypothetical
protein Y66D12A.15 protein.
Length = 789
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 191 EDEQSACNILEYQNQAKMLFRN*ALSPR*DVPLKPA 298
E Q C LEY A+ FRN L+P + LKP+
Sbjct: 285 ETVQKRCIELEYPLLAEYDFRNDTLNPNLGIDLKPS 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,161,183
Number of Sequences: 27780
Number of extensions: 284541
Number of successful extensions: 757
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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