Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0017
(797 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 151 1e-37
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 95 1e-20
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 83 3e-17
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 81 2e-16
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 74 3e-14
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 72 8e-14
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 70 4e-13
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 69 6e-13
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 66 5e-12
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 63 5e-11
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 62 1e-10
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 52 1e-07
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 47 3e-06
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 32 0.083
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.33
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 28 1.8
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 5.4
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 151 bits (366), Expect = 1e-37
Identities = 62/88 (70%), Positives = 75/88 (85%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 424
++ M W+ IPGK T WEGGLYKL M F ++YP+ PPKC+F PPLFHPNVYPSGTVCLS
Sbjct: 36 LDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLS 95
Query: 425 LLDEEKDWRPAITIKQILLGIQDLLNEP 508
+L+EE+ W+PAITIKQILLGIQDLL++P
Sbjct: 96 ILNEEEGWKPAITIKQILLGIQDLLDDP 123
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +3
Query: 141 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNL 254
MS + RL EERK WR+DHPFGF A+P K+ DG L+L
Sbjct: 1 MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDL 38
Score = 29.9 bits (64), Expect = 0.44
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 511 VKDPAQAEAYTIYCQNRLEYDK 576
+ PAQ EAYT++ ++++EY+K
Sbjct: 125 IASPAQTEAYTMFKKDKVEYEK 146
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 94.7 bits (225), Expect = 1e-20
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 11/98 (11%)
Frame = +2
Query: 248 EFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 427
+F TW+C I G GTP+EGGLY + F DYP PP KFE FHPNVY GTVC+S+
Sbjct: 34 DFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISI 93
Query: 428 LDEEKD-----------WRPAITIKQILLGIQDLLNEP 508
L D W P ++++ILL + +L EP
Sbjct: 94 LHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEP 131
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 83.4 bits (197), Expect = 3e-17
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
M W I G TP+E G +KL + F + YP+ PP KF +FHPNVY +G +CL +L
Sbjct: 34 MLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDIL- 92
Query: 434 EEKDWRPAITIKQILLGIQDLLNEP 508
+ W P + IL IQ LLN+P
Sbjct: 93 -QNRWSPTYDVAAILTSIQSLLNDP 116
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 80.6 bits (190), Expect = 2e-16
Identities = 33/83 (39%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ L + F DYP PPK F ++HPN+ +G++CL +L ++
Sbjct: 33 WQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 73.7 bits (173), Expect = 3e-14
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
++ + G + + +EGG + L + D+YP PP +F ++HPNV G +CLS L +
Sbjct: 34 FKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTL--K 91
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
KDW PA+ I+ +LL IQ L+ P
Sbjct: 92 KDWSPALQIRTVLLSIQALMGAP 114
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 72.1 bits (169), Expect = 8e-14
Identities = 34/83 (40%), Positives = 47/83 (56%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W I G T +EG +K+ M F +YP SPP F P++HPNV SG +CL +L ++
Sbjct: 61 WAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDK 120
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W ++ ILL +Q LL EP
Sbjct: 121 --WSAVYNVQTILLSLQSLLGEP 141
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 69.7 bits (163), Expect = 4e-13
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLL--- 430
WE I G + T +EGG + + F DYP PPK KF ++HPNV+P+G VC+S+L
Sbjct: 38 WEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPP 97
Query: 431 --------DEEKDWRPAITIKQILLGIQDLLNEP 508
D + W P + + IL+ + +L+ P
Sbjct: 98 GDDKYGYEDAGERWLPVHSPETILISVISMLSSP 131
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 69.3 bits (162), Expect = 6e-13
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +2
Query: 278 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 454
G +GTP+EGG + + + DYP PPK F+ ++HPNV +G +CL +L ++ W P
Sbjct: 42 GPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQ--WSP 99
Query: 455 AITIKQILLGIQDLLNEP 508
T+K L+ +Q LL P
Sbjct: 100 VYTMKSALISLQSLLCTP 117
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 66.1 bits (154), Expect = 5e-12
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +2
Query: 296 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQI 475
++GG +K R+ D+YP PPK K ++HPN+ G VCL++L +DW P + + I
Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNIL--RQDWNPVLNLNSI 122
Query: 476 LLGIQDLLNEP 508
L+G+Q L P
Sbjct: 123 LVGLQFLFLSP 133
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 62.9 bits (146), Expect = 5e-11
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W C G + + GG + + F DYP PP +F ++HPN G VCL++L ++
Sbjct: 39 WACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAIL-KQ 97
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
+ ++P+I ++ +L I LL EP
Sbjct: 98 QVFKPSIKLRSVLEQILQLLREP 120
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 61.7 bits (143), Expect = 1e-10
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCL 421
++ W+ I G TP+EGG + L + + YP SPP F+ + HPN+ + +G VC+
Sbjct: 32 VDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCM 91
Query: 422 SLLDEEKDWRPAITIKQILLGIQDLLN 502
+L + W PA +++ L I LL+
Sbjct: 92 DIL--KTHWSPAWSLQSACLAIISLLS 116
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 51.6 bits (118), Expect = 1e-07
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
+ W I G TP+EGG Y +IF DYP PP + P + +CLS D
Sbjct: 35 LEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSFSD 92
Query: 434 -EEKDWRPAITIKQILLGI 487
K W P+ + IL+G+
Sbjct: 93 FHPKSWNPSWMVSTILVGL 111
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 47.2 bits (107), Expect = 3e-06
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 278 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 454
G TP+ GG++K+ + +YP P F +FHPN+ SG+VCL ++++ W P
Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQ--TWSP 95
Query: 455 AITIKQIL-LGIQDLLNEP 508
+ I + + LL P
Sbjct: 96 MFDMINIFEVFLPQLLRYP 114
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 32.3 bits (70), Expect = 0.083
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCL 421
I W I G + E +Y L++ +YP +PP F + P V +G V
Sbjct: 36 ITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNP 95
Query: 422 SLLDEEKDWRPAITIKQILLGIQDLLNEPT*KIQRKL 532
+D + W+ +++ +LL DL E RKL
Sbjct: 96 HKIDCLRHWKREYSMETVLL---DLKKEMASSSNRKL 129
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 30.3 bits (65), Expect = 0.33
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 369 NLHFGGLDG*SSLKIIRSLYSPPSHGVPFLPGIAHSQVINS 247
N F G+ L + S SP HG P +PG+ H+ + NS
Sbjct: 442 NPQFSGVLNLPGLGTMPSFPSPYQHGQPQIPGMLHASLSNS 482
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -2
Query: 199 WSLRQAFRSSAKRALAIPDIFYKNNSIYEPSFNQGL 92
W LR+ +S++ + ++F K NSIY +F++ L
Sbjct: 71 WQLREQEQSNSHISRNENELFSKENSIYNGNFSENL 106
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 194 GPSLWFCREAYEESRWFIEFMTWECAIPGKKGTPWEGGLYK 316
GPS R+ + + ++ TW C++ G+ G +G L+K
Sbjct: 122 GPSKVVSRK-HAVVEYDLDDQTWNCSVYGRNGIKVDGKLFK 161
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,332,181
Number of Sequences: 5004
Number of extensions: 73073
Number of successful extensions: 171
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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