Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0017
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 169 2e-42
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 169 2e-42
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 88 8e-18
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 88 8e-18
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 79 4e-15
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 79 4e-15
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 79 4e-15
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 78 8e-15
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 73 2e-13
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 71 1e-12
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 70 2e-12
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 70 2e-12
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 67 1e-11
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 62 4e-10
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 61 8e-10
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 56 2e-08
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 56 3e-08
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 54 9e-08
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 49 4e-06
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 47 2e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.004
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine re... 31 0.72
AF067609-1|ABB51195.1| 394|Caenorhabditis elegans Hypothetical ... 31 0.96
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 169 bits (412), Expect = 2e-42
Identities = 68/88 (77%), Positives = 80/88 (90%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 424
+ WECAIPG+K T WEGGLY++RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLS
Sbjct: 36 LNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLS 95
Query: 425 LLDEEKDWRPAITIKQILLGIQDLLNEP 508
LLDE KDW+P+I+IKQ+L+GIQDLLN P
Sbjct: 96 LLDENKDWKPSISIKQLLIGIQDLLNHP 123
Score = 72.1 bits (169), Expect = 4e-13
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +3
Query: 141 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNL 254
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNL 38
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +1
Query: 511 VKDPAQAEAYTIYCQNRLEYDK 576
++DPAQAEAY IYCQNR EY+K
Sbjct: 125 IEDPAQAEAYQIYCQNRAEYEK 146
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 169 bits (412), Expect = 2e-42
Identities = 68/88 (77%), Positives = 80/88 (90%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 424
+ WECAIPG+K T WEGGLY++RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLS
Sbjct: 36 LNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLS 95
Query: 425 LLDEEKDWRPAITIKQILLGIQDLLNEP 508
LLDE KDW+P+I+IKQ+L+GIQDLLN P
Sbjct: 96 LLDENKDWKPSISIKQLLIGIQDLLNHP 123
Score = 72.1 bits (169), Expect = 4e-13
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +3
Query: 141 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNL 254
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNL 38
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +1
Query: 511 VKDPAQAEAYTIYCQNRLEYDK 576
++DPAQAEAY IYCQNR EY+K
Sbjct: 125 IEDPAQAEAYQIYCQNRAEYEK 146
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 87.8 bits (208), Expect = 8e-18
Identities = 38/85 (44%), Positives = 53/85 (62%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
+TWE I G + TP+E G +KL + F ++YP+ PP KF +FHPNVY G++CL +L
Sbjct: 34 LTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL- 92
Query: 434 EEKDWRPAITIKQILLGIQDLLNEP 508
+ W P + IL IQ LL+EP
Sbjct: 93 -QNRWSPTYDVAAILTSIQSLLDEP 116
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 87.8 bits (208), Expect = 8e-18
Identities = 38/85 (44%), Positives = 53/85 (62%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
+TWE I G + TP+E G +KL + F ++YP+ PP KF +FHPNVY G++CL +L
Sbjct: 34 LTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL- 92
Query: 434 EEKDWRPAITIKQILLGIQDLLNEP 508
+ W P + IL IQ LL+EP
Sbjct: 93 -QNRWSPTYDVAAILTSIQSLLDEP 116
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 79.0 bits (186), Expect = 4e-15
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P++GG++ L + F DYP PPK F ++HPN+ +G++CL +L
Sbjct: 33 WQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--R 90
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 91 SQWSPALTISKVLLSICSLLCDP 113
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 79.0 bits (186), Expect = 4e-15
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P++GG++ L + F DYP PPK F ++HPN+ +G++CL +L
Sbjct: 33 WQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--R 90
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 91 SQWSPALTISKVLLSICSLLCDP 113
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 79.0 bits (186), Expect = 4e-15
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Frame = +2
Query: 251 FMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLL 430
F WEC I G + T + G++ R+ F DYP SPPK +F +FHPN+Y G VC+S+L
Sbjct: 34 FFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISIL 93
Query: 431 DEEKD-----------WRPAITIKQILLGIQDLLNEP 508
D W P +I++ILL + +L EP
Sbjct: 94 HAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLAEP 130
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 77.8 bits (183), Expect = 8e-15
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +2
Query: 257 TWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDE 436
+W C +PG +G+PWEGG Y++ + F +P PP C+F+ PL HPNV G++ L +L++
Sbjct: 70 SWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ 128
Query: 437 EKDWRPAITIKQILLGIQDLLNEP 508
E W ++K++L I +LL P
Sbjct: 129 E-HWSSETSLKKLLREISNLLATP 151
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/79 (37%), Positives = 50/79 (63%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 451
I G +P+ GG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 40 IAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDK--WS 97
Query: 452 PAITIKQILLGIQDLLNEP 508
PA+ I+ +LL IQ LL+ P
Sbjct: 98 PALQIRTVLLSIQALLSAP 116
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W I G T ++GG +K + F +YP SPP KF ++HPNVY +G +C+S+L
Sbjct: 42 WTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSP 101
Query: 440 KD-----------WRPAITIKQILLGIQDLLNEP 508
D W P +++ ILL + LLNEP
Sbjct: 102 IDDPQSGELACERWNPTQSVRTILLSVISLLNEP 135
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDE- 436
WE + G T +EGG +K + F DYP PPK KF ++HPN+ G VC+S+L +
Sbjct: 36 WEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDP 95
Query: 437 ----------EKDWRPAITIKQILLGIQDLLNEP 508
E+ W P T++ ILL + +L +P
Sbjct: 96 GDDKWGYERPEERWLPVHTVETILLSVISMLTDP 129
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 451
IP K+ P+ G +K+ + F DYP PPK FE ++HPNV G CL ++ E +W+
Sbjct: 40 IPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAE-NWK 96
Query: 452 PAITIKQILLGIQDLLNEP 508
PA +Q+++ + L+NEP
Sbjct: 97 PATKTEQVMMALLSLINEP 115
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDW 448
I G TP+ GG++ L + D YP SPP KF ++HPNV +G +CL +L ++ W
Sbjct: 43 IRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQ--W 100
Query: 449 RPAITIKQILLGIQDLLNEP 508
++T++ +LL IQ L+ P
Sbjct: 101 AASLTLRTVLLSIQALMCTP 120
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLD- 433
I G TP+ GL++ + F YP SPPKC F F+PN+Y G +CLS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 434 ----EEKDWRPAITIKQILLGIQDLLNE 505
E+ W P ++ Q+L+ IQ+++ +
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVIEK 536
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 61.3 bits (142), Expect = 8e-10
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF--EPPLFHPNVYPSGTVCLSLLD 433
W+ + G +GT + G ++ L+ F YP + P+ F E HP++Y +G +CLS+L
Sbjct: 38 WKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILS 97
Query: 434 EEKDWRPAITIKQILLGIQDLLN 502
+ DW PA++++ + L I +L+
Sbjct: 98 D--DWTPALSVQSVCLSILSMLS 118
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
+ W I G TP+EGG+Y +++F D+P PP P + + +CLS+ D
Sbjct: 38 LEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSISD 95
Query: 434 EEKD-WRPAITIKQILLGIQDLLNE 505
D W PA T+ I+ G+ +N+
Sbjct: 96 YHPDTWNPAWTVSTIITGLMSFMND 120
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDW 448
I G + TP+EGG+++L + + YP P KF ++HP+V P GT+CL +D W
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV-W 443
Query: 449 RPAITIKQILLGIQDLLN 502
++TI ++L+ IQ ++
Sbjct: 444 PVSMTIYKVLIVIQSWMS 461
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
+ W + G TP+ GG Y ++IFK+++P SPP P + + +CLS+ D
Sbjct: 49 LEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRLCLSISD 106
Query: 434 -EEKDWRPAITIKQILLGIQDLLNE 505
+ W P T+ IL+G+ +NE
Sbjct: 107 YHPESWNPGWTVSAILIGLHSFMNE 131
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 54.4 bits (125), Expect = 9e-08
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPK---------------CKFEPPLFHPNV-YP 403
I G +GTP+ GG +++++ + YP PPK KF ++HPN+
Sbjct: 57 IKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQ 116
Query: 404 SGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 508
+GT+CL +L ++ W ++T++ +LL +Q +L P
Sbjct: 117 TGTICLDILKDK--WTASLTLRTVLLSLQAMLCSP 149
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 287 GTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAIT 463
G ++ ++ L + +YP PP KF ++HPNV P + +C +L +E +W+P T
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQE-NWKPETT 112
Query: 464 IKQILLGIQDLLNEP 508
++ +LL + LLNEP
Sbjct: 113 MEDVLLNLIVLLNEP 127
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 278 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDE 436
G K T +E G++++R+ D YP P F +FHPN+ SGTVCL ++++
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQ 94
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +2
Query: 296 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD----EEKDWRPAIT 463
+ GG ++ ++ +Y + PP K ++HPN+ G++CLS+L ++ WRP
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRN 131
Query: 464 IKQILLGIQDLLNE 505
+ ++ G+ L N+
Sbjct: 132 LTDVVHGLVSLFND 145
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-E 436
W I G GT +EGG+Y R+IF DYP PP P + + VCLS+
Sbjct: 41 WHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSISGYH 98
Query: 437 EKDWRPAITIKQILLGI 487
+ W P+ +I+ LL +
Sbjct: 99 PETWLPSWSIRTALLAL 115
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS 406
I G TP+E G++++ + F D+YP++ P+ KF+ +++ V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS-GTVCLSLLDE 436
W +I G TP+E +Y L++ +YP PP +F + V S G + L
Sbjct: 41 WTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTT 100
Query: 437 EKDWRPAITIKQILLGIQ 490
++W + IK +L I+
Sbjct: 101 LRNWSNSYMIKTVLEDIR 118
>AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine
receptor, class h protein33 protein.
Length = 334
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -2
Query: 715 SVVLLF*SPVFTFILLFRQWLSSLTLHCPILIF 617
S ++LF S +F + ++RQ+LS L + C ++I+
Sbjct: 110 SALILFTSRIFMIMNMYRQYLSHLRIFCELMIY 142
>AF067609-1|ABB51195.1| 394|Caenorhabditis elegans Hypothetical
protein C23H5.11 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -2
Query: 313 IQPTFPWSPLFTRYRTFPSHKFNEPSGFFIGLATKPK--GWSLRQAFRSSAKRALAIPDI 140
I + P+ + RTF SH F+ S FF G+A +PK S + S R +A +
Sbjct: 277 ISYSLPFPLMLVLSRTFRSHLFHLISNFFQGVARRPKIRKDSALRKMTSQIARHMAFSKL 336
Query: 139 FYKNNSIYEPSFN 101
+N+ + E ++
Sbjct: 337 EMENSELDERMYS 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,249,368
Number of Sequences: 27780
Number of extensions: 408844
Number of successful extensions: 1040
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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