Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0017
(797 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 143 1e-34
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 88 6e-18
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 88 6e-18
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 88 6e-18
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 87 2e-17
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 87 2e-17
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 84 1e-16
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 83 2e-16
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 83 2e-16
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 83 2e-16
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 83 3e-16
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 83 3e-16
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 3e-16
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 3e-16
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 83 3e-16
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 82 5e-16
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 81 6e-16
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 81 8e-16
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 81 8e-16
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 80 2e-15
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 79 3e-15
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 79 3e-15
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 77 1e-14
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 74 1e-13
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 74 1e-13
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 74 1e-13
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 74 1e-13
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 72 4e-13
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 71 1e-12
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 70 2e-12
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 68 6e-12
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 67 1e-11
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 66 3e-11
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 65 4e-11
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 64 1e-10
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 59 4e-09
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 58 5e-09
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 56 2e-08
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 56 4e-08
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 56 4e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 55 5e-08
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 54 1e-07
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 51 8e-07
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 50 2e-06
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 49 3e-06
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 49 4e-06
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 48 1e-05
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 48 1e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 46 3e-05
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 46 3e-05
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 42 5e-04
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 42 5e-04
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 38 0.010
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 37 0.013
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 33 0.22
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 33 0.29
At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase famil... 30 2.0
At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase famil... 30 2.0
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 29 4.7
At3g59700.1 68416.m06661 lectin protein kinase, putative similar... 28 8.3
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 143 bits (347), Expect = 1e-34
Identities = 59/88 (67%), Positives = 68/88 (77%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 424
+ M W C IPGK GT WEGG + L M F +DYPS PPKCKF FHPNVYPSGTVCLS
Sbjct: 37 VNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLS 96
Query: 425 LLDEEKDWRPAITIKQILLGIQDLLNEP 508
+L+E+ WRPAIT+KQIL+GIQDLL+ P
Sbjct: 97 ILNEDYGWRPAITVKQILVGIQDLLDTP 124
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 144 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNL 254
SGIA RLAEERK+WRK+HP GFVA+P DG++NL
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNL 39
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 517 DPAQAEAYTIYCQNRLEYDK 576
DPAQ + Y ++CQ+ +EY K
Sbjct: 128 DPAQTDGYHLFCQDPVEYKK 147
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 88.2 bits (209), Expect = 6e-18
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +L
Sbjct: 34 MLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL- 92
Query: 434 EEKDWRPAITIKQILLGIQDLLNEP 508
+ W P + IL IQ LL +P
Sbjct: 93 -QNQWSPIYDVAAILTSIQSLLCDP 116
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 88.2 bits (209), Expect = 6e-18
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +L
Sbjct: 34 MLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL- 92
Query: 434 EEKDWRPAITIKQILLGIQDLLNEP 508
+ W P + IL IQ LL +P
Sbjct: 93 -QNQWSPIYDVAAILTSIQSLLCDP 116
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 88.2 bits (209), Expect = 6e-18
Identities = 36/85 (42%), Positives = 50/85 (58%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +L
Sbjct: 34 MLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL- 92
Query: 434 EEKDWRPAITIKQILLGIQDLLNEP 508
+ W P + IL IQ LL +P
Sbjct: 93 -QNQWSPIYDVAAILTSIQSLLCDP 116
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 86.6 bits (205), Expect = 2e-17
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +2
Query: 254 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD 433
M W I G + TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +L
Sbjct: 34 MHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL- 92
Query: 434 EEKDWRPAITIKQILLGIQDLLNEP 508
+ W P + +L IQ LL +P
Sbjct: 93 -QNQWSPIYDVAAVLTSIQSLLCDP 116
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 86.6 bits (205), Expect = 2e-17
Identities = 34/83 (40%), Positives = 55/83 (66%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W I G GTP+EGG++ L + F DYP PPK F+ P++HPN+ G++C+++L ++
Sbjct: 39 WTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDK 98
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+ ++++LL I LL +P
Sbjct: 99 --WTPALMVEKVLLSILLLLEKP 119
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPNV +G++CL +L E+
Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +L E+
Sbjct: 63 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 122
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 123 --WSPALTISKVLLSICSLLTDP 143
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +L E+
Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/83 (46%), Positives = 50/83 (60%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G K T +EG Y+L + F +DYP PPK KFE FHPNV G +CL +L ++
Sbjct: 67 WKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDK 126
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W A ++ ILL IQ LL EP
Sbjct: 127 --WSSAYDVRTILLSIQSLLGEP 147
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +L E+
Sbjct: 33 WQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +L E+
Sbjct: 33 WQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +L E+
Sbjct: 34 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 93
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 94 --WSPALTISKVLLSICSLLTDP 114
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +L E+
Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +L E+
Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 81.8 bits (193), Expect = 5e-16
Identities = 33/83 (39%), Positives = 53/83 (63%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F+ ++HPN+ +G++CL +L E+
Sbjct: 33 WQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 81.4 bits (192), Expect = 6e-16
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G +CL +L ++
Sbjct: 33 WQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ 92
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++LL I LL +P
Sbjct: 93 --WSPALTISKVLLSICSLLTDP 113
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 81.0 bits (191), Expect = 8e-16
Identities = 32/87 (36%), Positives = 53/87 (60%)
Frame = +2
Query: 248 EFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 427
+ W+ I G +P+ GG++ + + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDI 88
Query: 428 LDEEKDWRPAITIKQILLGIQDLLNEP 508
L E+ W PA+T+ ++LL I LL +P
Sbjct: 89 LKEQ--WSPALTVSKVLLSICSLLTDP 113
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 81.0 bits (191), Expect = 8e-16
Identities = 32/87 (36%), Positives = 53/87 (60%)
Frame = +2
Query: 248 EFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 427
+ W+ I G +P+ GG++ + + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDI 88
Query: 428 LDEEKDWRPAITIKQILLGIQDLLNEP 508
L E+ W PA+T+ ++LL I LL +P
Sbjct: 89 LKEQ--WSPALTVSKVLLSICSLLTDP 113
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G K T +EG Y+L + F +DYP PK KFE FHPNV G +CL +L ++
Sbjct: 68 WKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDK 127
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W A ++ ILL IQ LL EP
Sbjct: 128 --WSSAYDVRTILLSIQSLLGEP 148
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDW 448
IPG GTP+EGG +++ + D YP PPK +F ++HPN+ SG +CL +L ++ W
Sbjct: 39 IPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQ--W 96
Query: 449 RPAITIKQILLGIQDLLNEP 508
PA+T+K L+ IQ LL+ P
Sbjct: 97 SPALTLKTALVSIQALLSAP 116
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 79.0 bits (186), Expect = 3e-15
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F+ ++HPN+ G++CL +L E+
Sbjct: 34 WQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ 93
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA T ++LL I LL +P
Sbjct: 94 --WSPAPTTSKVLLSICSLLTDP 114
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 77.4 bits (182), Expect = 1e-14
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 CA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 442
CA I G GTP+E GL+++++ D+P SPPK F +FHPNV +G +C++ L +K
Sbjct: 43 CADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL--KK 100
Query: 443 DWRPAITIKQILLGIQDLLNEP 508
DW P++ ++ +L ++ LL EP
Sbjct: 101 DWNPSLGLRHVLSVVRCLLIEP 122
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 74.1 bits (174), Expect = 1e-13
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 451
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 41 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 98
Query: 452 PAITIKQILLGIQDLLNEP 508
PA+ I+ +LL IQ LL+ P
Sbjct: 99 PALQIRTVLLSIQALLSAP 117
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 74.1 bits (174), Expect = 1e-13
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 451
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 41 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 98
Query: 452 PAITIKQILLGIQDLLNEP 508
PA+ I+ +LL IQ LL+ P
Sbjct: 99 PALQIRTVLLSIQALLSAP 117
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 74.1 bits (174), Expect = 1e-13
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 451
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 65
Query: 452 PAITIKQILLGIQDLLNEP 508
PA+ I+ +LL IQ LL+ P
Sbjct: 66 PALQIRTVLLSIQALLSAP 84
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 73.7 bits (173), Expect = 1e-13
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +L E+
Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ 92
Query: 440 KDWRPAITIKQILLGIQ 490
W PA+TI ++ L Q
Sbjct: 93 --WSPALTISKVTLIFQ 107
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W I G GTP+EGG++ L +IF DYP PPK F+ ++H NV +G + +++L +
Sbjct: 68 WIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRD- 126
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W PA+TI ++L I+ + +P
Sbjct: 127 -SWSPALTITKVLQAIRSIFLKP 148
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W I G T +EGG + M F +YP+SPP +F ++HPNVYP G VC+S+L
Sbjct: 37 WSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPP 96
Query: 440 KD-----------WRPAITIKQILLGIQDLLNEP 508
D W P T++ I+L I +L+ P
Sbjct: 97 GDDPSGYELASERWTPVHTVESIMLSIISMLSGP 130
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 70.1 bits (164), Expect = 2e-12
Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Frame = +2
Query: 155 KCTFS*RTESLA*GPSLWFCREAYEESRWFIEFMTWECAIPGKKGTPWEGGLYKLRMIFK 334
K FS R S A S W +S W I G T +EGG + M F
Sbjct: 37 KLAFSFRNNSKA---SPWNLSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFP 93
Query: 335 DDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-----------WRPAITIKQILL 481
+YP+SPP +F ++HPNVY G VC+S+L D W P T++ I+L
Sbjct: 94 QNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIML 153
Query: 482 GIQDLLNEP 508
I +L+ P
Sbjct: 154 SIISMLSGP 162
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +2
Query: 242 FIEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 421
F F T + I G + T + G++ L++ + YP PP F P++HPN+ SG +CL
Sbjct: 41 FSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICL 100
Query: 422 SLLD--EEKDWRPAITIKQILLGIQDLLNEP 508
+L+ + W+P++ I +L ++ LL+EP
Sbjct: 101 DILNLPPKGAWQPSLNISTVLTSMRLLLSEP 131
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
W +I G T +EGG + M F ++YP SPP F ++HPNVY G VC+S+L
Sbjct: 38 WSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPP 97
Query: 440 KD-----------WRPAITIKQILLGIQDLLNEP 508
D W P T++ I+L I +L+ P
Sbjct: 98 GDDPHGYELASERWTPVHTVESIVLSIISMLSGP 131
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDE 436
W I G TP+EGG+++L + YP PP+ +F +FHPNV + +G +CL +L
Sbjct: 37 WTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDIL-- 94
Query: 437 EKDWRPAITIKQILLGIQDLLNEP 508
+ W PA T++ + I L+ P
Sbjct: 95 KNAWSPAWTLQSVCRAIIALMAHP 118
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 65.3 bits (152), Expect = 4e-11
Identities = 26/70 (37%), Positives = 45/70 (64%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 451
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 41 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 98
Query: 452 PAITIKQILL 481
PA+ I+ +LL
Sbjct: 99 PALQIRTVLL 108
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEE 439
WE + G G P+E G++ + + YP PPK F+ +FHPN+ G + + +L
Sbjct: 62 WEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSR 121
Query: 440 KDWRPAITIKQILLGIQDLLNEP 508
W A+TI +LL I +L+ P
Sbjct: 122 --WSSALTINLVLLSICSILSNP 142
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDE 436
W + G GT + Y L++ F YP P+ F PP HP++Y +G +CL +L +
Sbjct: 46 WVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYD 105
Query: 437 EKDWRPAITIKQILLGIQDLLN 502
W PA+T+ + + I +L+
Sbjct: 106 --SWSPAMTVSSVCISILSMLS 125
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDE 436
W + G GT + Y+L++ F + YP P+ F P HP++Y +G +CL +L +
Sbjct: 46 WIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYD 105
Query: 437 EKDWRPAITIKQILLGIQDLLNEPT*K 517
W PA+T+ I + I +L+ T K
Sbjct: 106 --SWSPAMTVSSICISILSMLSSSTEK 130
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLSLLDE 436
W + G GT + Y+L++ F + YP P+ F P HP++Y +G +CL +L +
Sbjct: 46 WTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYD 105
Query: 437 EKDWRPAITIKQILLGIQDLLN 502
W PA+T+ + + I +L+
Sbjct: 106 --SWSPAMTVNSVCISILSMLS 125
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGTVCLSLLDE 436
W + G GT + Y+L++ F + YP P+ F+ P HP++Y +G +CL +L +
Sbjct: 46 WIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYD 105
Query: 437 EKDWRPAITIKQILLGIQDLLNEPT*KIQRK 529
W PA+ + I L I +L+ + K + K
Sbjct: 106 --SWSPAMRLSSICLSILSMLSSSSVKQKPK 134
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL----- 430
I G +GTP+ GL+ + F D YPS+PP + +PN+Y G VCLSLL
Sbjct: 368 IIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSG 427
Query: 431 DEEKDWRP-AITIKQILLGIQDLL 499
++ + W P T+ Q+L+ IQ L+
Sbjct: 428 NQREKWIPNTSTMLQVLVSIQGLI 451
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 55.2 bits (127), Expect = 5e-08
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLD---- 433
I G +GTP+ GL+ + F D YPS PPK + +PN+Y G VCLSL+
Sbjct: 641 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLISTWTG 700
Query: 434 -EEKDWRP-AITIKQILLGIQDL-LNE 505
+ + W P T+ Q+L+ IQ L LNE
Sbjct: 701 KKREKWLPKESTMLQLLVSIQALILNE 727
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLL----- 430
I G +GTP+ GL+ + F D YPS PP + +PN+Y G VCLSLL
Sbjct: 307 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAG 366
Query: 431 DEEKDWRP-AITIKQILLGIQDL-LNE 505
+ W P T+ Q+L+ IQ L LNE
Sbjct: 367 SAREKWLPNESTMLQLLVSIQALILNE 393
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSL 427
I G +GTP+ GL+ + F D YPS PP + +PN+Y G V +S+
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +2
Query: 248 EFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 427
+ M +E I +G + G + + YP PK K + ++HPN+ G VCL++
Sbjct: 59 DLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNI 117
Query: 428 LDEEKDWRPAITIKQILLGIQDLLNEP 508
L E DW+P + I ++ G+ L EP
Sbjct: 118 LRE--DWKPVLNINTVIYGLFHLFTEP 142
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +2
Query: 248 EFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 427
+ + W + G +GTP+ GG Y ++ F +YP PP P + +CLS+
Sbjct: 33 DILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSM 90
Query: 428 LD-EEKDWRPAITIKQILLGIQDLL--NEPT 511
D + W P ++ IL G+ + N PT
Sbjct: 91 SDFHPESWNPMWSVSSILTGLLSFMMDNSPT 121
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 272 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLDE--- 436
I G GTP++ GL+ DYPS PP + +PN+Y G VCLSLL+
Sbjct: 886 IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTG 945
Query: 437 --EKDWRP-AITIKQILLGIQDLL 499
+ W P + +I Q+L+ +Q L+
Sbjct: 946 RGNEVWDPKSSSILQVLVSLQGLV 969
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 248 EFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 427
+ + W + G +GTP+ GG Y ++ F +YP PP P + +CLS+
Sbjct: 33 DILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKICLSM 90
Query: 428 LD-EEKDWRPAITIKQILLGI 487
D + W P ++ IL G+
Sbjct: 91 SDFHPESWNPMWSVSSILTGL 111
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 278 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 454
G K + +EGG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ--TWSP 95
Query: 455 AITIKQI 475
+ +
Sbjct: 96 MFDLVNV 102
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 278 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 454
G K + ++GG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ--TWSP 95
Query: 455 AITIKQI 475
+ +
Sbjct: 96 MFDLVNV 102
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = +2
Query: 269 AIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP--PLFHPNVYPSGTVCLSLLDE-- 436
A+ G GTP+ GL+ ++ YP PP + +PN+Y SG VCLSLL+
Sbjct: 697 ALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWS 756
Query: 437 ---EKDWRP-AITIKQILLGIQDL-LNE 505
+ W + +I Q+LL Q L LNE
Sbjct: 757 GSGTEVWNAGSSSILQLLLSFQALVLNE 784
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCL 421
I +W I G T +EG +++L++ DYP SPP +F+ + V P +G V
Sbjct: 42 ILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDP 101
Query: 422 SLLDEEKDWRPAITIKQILLGI-QDLLNEPT*KIQRKLK 535
S +WR T++ +L+ + +++++ K+ + L+
Sbjct: 102 SHFPMLSNWRREFTMEDLLIQLKKEMMSSQNRKLAQPLE 140
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCL 421
I +W I G T +EG +++L++ +YP SPP +F+ + V P +G V
Sbjct: 42 IYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEP 101
Query: 422 SLLDEEKDWRPAITIKQILLGIQ 490
SL +WR T++ IL+ ++
Sbjct: 102 SLFPMLTNWRREYTMEDILVKLK 124
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 WECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-E 436
W+ AI G T +EGG+Y R+ DYP PP P + + +CLS+ +
Sbjct: 43 WQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICLSISNYH 100
Query: 437 EKDWRPAITIKQILLGI 487
+ W+P+ +++ L+ +
Sbjct: 101 PEHWQPSWSVRTALVAL 117
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 278 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 454
G + ++GG++K+++ + YP P F ++HPNV SG VCL ++++ W P
Sbjct: 38 GPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQ--TWSP 95
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCL 421
I +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 43 IYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDS 102
Query: 422 SLLDEEKDWRPAITIKQIL 478
+W+ T++ IL
Sbjct: 103 KKFGVLANWQRQYTMEDIL 121
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 245 IEFMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCL 421
I +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 44 IYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDP 103
Query: 422 SLLDEEKDWRPAITIKQILLGIQ 490
+W+ T++ IL+ ++
Sbjct: 104 KKFGLLANWQREYTMEDILVQLK 126
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 245 IEFMTWECAIPGKKG-TPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVC 418
I +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 43 IYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVD 102
Query: 419 LSLLDEEKDWRPAITIKQIL 478
+W+ T++ IL
Sbjct: 103 SKKFGVLANWQRQYTMEDIL 122
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 245 IEFMTWECAIPGKKG-TPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVC 418
I +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 44 IYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVD 103
Query: 419 LSLLDEEKDWRPAITIKQILLGIQ 490
+W+ T++ IL+ ++
Sbjct: 104 PKKFGLLANWQREYTMEDILVQLK 127
>At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase family
protein similar to Pyrrolidone-carboxylate peptidase
(Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
Prosite PS00141: Eukaryotic and viral aspartyl proteases
active site
Length = 94
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 588 AGTCNGCC*VNIRMGQWSVNELSHCLKSSINVKTGD*NSNTTLFW 722
+G C G C V G+ + ++L L+SS V +GD N+N T+ W
Sbjct: 45 SGLCLGSCSVLDTAGEGAKSKLYEVLESS--VVSGDKNNNGTVVW 87
>At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase family
protein similar to Pyrrolidone-carboxylate peptidase
(Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
Prosite PS00141: Eukaryotic and viral aspartyl proteases
active site
Length = 217
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 588 AGTCNGCC*VNIRMGQWSVNELSHCLKSSINVKTGD*NSNTTLFW 722
+G C G C V G+ + ++L L+SS V +GD N+N T+ W
Sbjct: 45 SGLCLGSCSVLDTAGEGAKSKLYEVLESS--VVSGDKNNNGTVVW 87
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -3
Query: 759 WKIP*R*CYSTISKIA*CCC--FNLLSSHLYCF 667
W I R C TI IA CC F+ SSHL F
Sbjct: 824 WNINERNCLGTIRNIANVCCVQFSPQSSHLLAF 856
>At3g59700.1 68416.m06661 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 661
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 255 INSMNHLDSS*ASRQNQRDGPYAKLSVLQLNVHLLSLTFS 136
IN + + S+ A + +DG + KLS++ V LS+ +S
Sbjct: 152 INGLRSVASASAGYYDDKDGSFKKLSLISREVMRLSIVYS 191
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,239,947
Number of Sequences: 28952
Number of extensions: 379732
Number of successful extensions: 952
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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