Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0015
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    99   3e-23
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    96   3e-22
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    96   3e-22
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.29 
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   3.6  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.7  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 99.1 bits (236), Expect = 3e-23
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = +2

Query: 2   RFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN 181
           +FEELN D F  T++PV+K L DA M K QI +IVLVGGSTRIPK+Q+L++DFF+GKELN
Sbjct: 128 KFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIKDFFDGKELN 187

Query: 182 KSINPDE 202
           + INPDE
Sbjct: 188 RGINPDE 194


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 95.9 bits (228), Expect = 3e-22
 Identities = 41/67 (61%), Positives = 57/67 (85%)
 Frame = +2

Query: 2   RFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN 181
           RFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  
Sbjct: 129 RFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKEPC 188

Query: 182 KSINPDE 202
           +SINPDE
Sbjct: 189 RSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 95.9 bits (228), Expect = 3e-22
 Identities = 41/67 (61%), Positives = 57/67 (85%)
 Frame = +2

Query: 2   RFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN 181
           RFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  
Sbjct: 129 RFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKEPC 188

Query: 182 KSINPDE 202
           +SINPDE
Sbjct: 189 RSINPDE 195


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -2

Query: 95  GFEPY-PSWHHGETSPLAPW*T*TDRR 18
           GF P+ PS H G   P  PW T  D R
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYR 494


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 325 HLQQSQYRGKGVLHQATADPAPPQLVTVQDSSL 227
           H+Q  Q       H A   PA P  +T  D S+
Sbjct: 113 HMQFMQLPHPAAAHSALLSPAMPHNLTRHDGSV 145


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 146 LLQDFFNGKELNKSINPDE 202
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 110 PVQYRGFEPYPSWHHGETSPLAP 42
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 483 QLEFTEQVVIFGHSTLTLKYLDEYSGLV 400
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,129
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)