Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0013
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    28   0.071
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    28   0.071
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.88 
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    24   1.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 28.3 bits (60), Expect = 0.071
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 768 HLHLTKGAEVLSEIFGCNILRTTADEYLSM 679
           H HL+K  ++ +E+FG ++L    + +LS+
Sbjct: 230 HQHLSKSVKLFNEVFGVSLLVLFGNSFLSI 259



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 768 HLHLTKGAEVLSEIFGCNILRTTADEYLSMSRRRAVLAV 652
           H HL+K   + +EIFG  +L      +L +++    L V
Sbjct: 858 HHHLSKLIRLFNEIFGHGLLLMFGISFLLVTQTIFALCV 896



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 768 HLHLTKGAEVLSEIFGCNILRTTADEYLSMSRRRAVLAV 652
           H HL+K     +EIFG  +L      +L +++   ++ V
Sbjct: 582 HHHLSKLVTRFNEIFGLGLLLMFGVSFLLITQTIFIICV 620


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 0.071
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 768 HLHLTKGAEVLSEIFGCNILRTTADEYLSM 679
           H HL+K  ++ +E+FG ++L    + +LS+
Sbjct: 248 HQHLSKSVKLFNEVFGVSLLVLFGNSFLSI 277


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +1

Query: 511 MVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPN 654
           +  + R+    L  G GF+K  E E  L     RH++    C  + P+
Sbjct: 608 VTSLNREEIKRLDNGVGFLKVKENEITLLVATVRHVMAPSTCQPQNPD 655


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 9   IRHIRHEYYKNFWLDLQNNILLIQELGLNQS 101
           +  ++HE+ +N +L  +    L  ELGLN++
Sbjct: 240 LARLKHEFAENRYLTERRRQQLSAELGLNEA 270


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +3

Query: 18  IRHEYYKNFW-LDLQNNILLI 77
           I HE   N++ +DL+NN+++I
Sbjct: 323 ILHELRNNYFHMDLENNVIII 343


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 768 HLHLTKGAEVLSEIFGCNILRTTADEYLSMSRRRAVLAV 652
           H HL+K     +EIFG  +L   A  +L +++   V+ V
Sbjct: 226 HHHLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVICV 264


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 644  RTSHQRPSIMCRRPNARS 591
            R S  RPS+  R PN ++
Sbjct: 1432 RVSQARPSVQLRYPNGKA 1449


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 644  RTSHQRPSIMCRRPNARS 591
            R S  RPS+  R PN ++
Sbjct: 1432 RVSQARPSVQLRYPNGKA 1449


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 394 TRGIAAASTTMLRSYSSRLTMEDDRRSCTRLLLLL 498
           TR IAA ++  + S  S + + DD      L  LL
Sbjct: 247 TRRIAAVASEKVTSEKSWIALNDDYNRLCHLCFLL 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,705
Number of Sequences: 336
Number of extensions: 3042
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)