Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0013
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 118 3e-26
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 118 3e-26
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 118 3e-26
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 118 3e-26
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 118 3e-26
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 118 3e-26
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 118 3e-26
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 118 3e-26
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 115 2e-25
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 60 6e-09
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 60 6e-09
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 60 6e-09
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 60 6e-09
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 60 6e-09
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 60 6e-09
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 60 6e-09
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 60 6e-09
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 60 6e-09
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 60 6e-09
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 60 6e-09
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 60 6e-09
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 58 5e-08
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 58 5e-08
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 58 5e-08
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 58 5e-08
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 58 5e-08
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 58 5e-08
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 58 5e-08
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 55 2e-07
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 55 2e-07
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 55 2e-07
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 55 2e-07
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 54 4e-07
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 54 4e-07
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 54 4e-07
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 54 4e-07
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 54 4e-07
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 54 4e-07
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 54 4e-07
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 54 4e-07
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 54 4e-07
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 54 4e-07
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 54 4e-07
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 54 4e-07
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 54 4e-07
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 54 4e-07
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 54 7e-07
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 54 7e-07
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 52 2e-06
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 52 2e-06
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 52 2e-06
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 52 2e-06
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 52 2e-06
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 52 2e-06
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 52 2e-06
BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein. 52 2e-06
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 51 4e-06
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 51 4e-06
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 51 4e-06
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 51 4e-06
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 51 4e-06
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 51 4e-06
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 49 2e-05
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 49 2e-05
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 49 2e-05
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 49 2e-05
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 49 2e-05
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 49 2e-05
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 46 1e-04
EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2 ... 46 2e-04
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 44 8e-04
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 44 8e-04
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 43 0.001
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 43 0.001
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 43 0.001
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 42 0.002
BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein. 42 0.002
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 42 0.002
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 42 0.003
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 42 0.003
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 42 0.003
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 42 0.003
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 42 0.003
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 42 0.003
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 42 0.003
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 42 0.003
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 42 0.003
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 41 0.006
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 41 0.006
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 40 0.010
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 39 0.023
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 39 0.023
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 39 0.023
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 38 0.040
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 38 0.052
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 38 0.052
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 38 0.052
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 38 0.052
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 38 0.052
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 38 0.052
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 38 0.052
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 38 0.052
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 38 0.052
BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein. 37 0.069
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 36 0.12
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 36 0.12
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 36 0.21
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 36 0.21
AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA bindi... 36 0.21
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 35 0.28
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 35 0.28
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 35 0.28
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 35 0.28
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 35 0.28
BC066549-1|AAH66549.1| 474|Homo sapiens RNA binding motif prote... 35 0.28
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 35 0.28
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 35 0.28
AF526533-1|AAM88417.1| 328|Homo sapiens putative RNA binding pr... 35 0.28
AB036991-1|BAC16207.1| 476|Homo sapiens developmentally regulat... 35 0.28
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 35 0.37
BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein. 35 0.37
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 34 0.49
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 34 0.49
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 34 0.49
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 34 0.49
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 33 0.85
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 33 0.85
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 33 0.85
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 33 0.85
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 33 0.85
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 33 0.85
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 33 0.85
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 33 0.85
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 33 0.85
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 33 0.85
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 33 0.85
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 33 0.85
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 33 0.85
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 33 0.85
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 33 0.85
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 33 0.85
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 33 0.85
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 33 1.1
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 33 1.1
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 33 1.1
AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein. 33 1.1
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 33 1.1
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 33 1.5
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 33 1.5
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 33 1.5
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 33 1.5
AF277292-1|AAF97236.1| 93|Homo sapiens unknown protein. 33 1.5
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 33 1.5
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 33 1.5
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 33 1.5
X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein. 32 2.0
X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein. 32 2.0
BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein. 32 2.0
AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen ... 32 2.0
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 32 2.6
BC039879-1|AAH39879.1| 177|Homo sapiens TRSPAP1 protein protein. 32 2.6
BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine ass... 32 2.6
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 32 2.6
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 32 2.6
AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine ass... 32 2.6
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 32 2.6
AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens ... 32 2.6
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 32 2.6
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 31 3.4
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 31 3.4
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 31 3.4
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 31 3.4
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 31 3.4
EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-relate... 31 4.5
BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein. 31 4.5
AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing ... 31 4.5
AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein. 31 4.5
AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein. 31 4.5
AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein. 31 4.5
AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens ... 31 4.5
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 31 6.0
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 31 6.0
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 31 6.0
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 31 6.0
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 31 6.0
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 6.0
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 31 6.0
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 31 6.0
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 31 6.0
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 31 6.0
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 31 6.0
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 31 6.0
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 31 6.0
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 31 6.0
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 6.0
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 30 7.9
BC014944-1|AAH14944.1| 672|Homo sapiens SLTM protein protein. 30 7.9
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 30 7.9
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 30 7.9
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 30 7.9
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 30 7.9
AK024710-1|BAB14971.1| 288|Homo sapiens protein ( Homo sapiens ... 30 7.9
AK000867-1|BAA91401.1| 511|Homo sapiens protein ( Homo sapiens ... 30 7.9
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 118 bits (283), Expect = 3e-26
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCTE++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 118 bits (283), Expect = 3e-26
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCTE++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 118 bits (283), Expect = 3e-26
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCTE++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 118 bits (283), Expect = 3e-26
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCTE++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 118 bits (283), Expect = 3e-26
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCTE++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 118 bits (283), Expect = 3e-26
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCTE++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 118 bits (283), Expect = 3e-26
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCTE++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 118 bits (283), Expect = 3e-26
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCTE++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 115 bits (276), Expect = 2e-25
Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSS--TAH 681
+MVQVK+D +TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 131 LMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRS 190
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
RKVFVGRCT ++T ++LRE+F +G V
Sbjct: 191 RKVFVGRCTGDMTEDELREFFSQYGDV 217
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/29 (65%), Positives = 27/29 (93%)
Frame = +2
Query: 422 RCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
+ SDLIVLGLPWKTTE+ +++YFS+FG++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEV 130
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 6 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 65
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 66 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 111
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 113 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 163
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 36 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 95
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 96 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 141
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 143 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 193
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 215 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 262 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 215 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 262 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 215 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 262 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 150 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 209
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 210 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 255
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 257 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 307
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 33 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 92
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 93 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 138
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 140 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 190
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 215 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 262 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 36 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 95
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 96 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 141
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 143 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 193
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 215 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 262 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 36 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 95
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 96 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 141
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 143 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 193
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 60.5 bits (140), Expect = 6e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +1
Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMID 624
L+ + ++ T L V +K D TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 625 GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
G+ D + G +KVFVG + + + E ++EYFG+FG+++
Sbjct: 215 GKLIDPKRAKALKGKEPP-KKVFVGGLSPDTSEEQIKEYFGAFGEIE 260
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRIPNGKD 663
+++ DT+T +GF FI + + E + L R H I C++++ K+
Sbjct: 262 IELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKE 312
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 57.6 bits (133), Expect = 5e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV--KKIFV 158
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G T E +REYFG FG+++
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIE 181
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEV 96
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 57.6 bits (133), Expect = 5e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV--KKIFV 158
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G T E +REYFG FG+++
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIE 181
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEV 96
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 57.6 bits (133), Expect = 5e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV--KKIFV 158
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G T E +REYFG FG+++
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIE 181
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEV 96
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 57.6 bits (133), Expect = 5e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV--KKIFV 158
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G T E +REYFG FG+++
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIE 181
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEV 96
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 57.6 bits (133), Expect = 5e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV--KKIFV 158
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G T E +REYFG FG+++
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIE 181
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEV 96
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 57.6 bits (133), Expect = 5e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV--KKIFV 158
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G T E +REYFG FG+++
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIE 181
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEV 96
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 57.6 bits (133), Expect = 5e-08
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 101 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPV--KKIFV 158
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G T E +REYFG FG+++
Sbjct: 159 GGLNPEATEEKIREYFGEFGEIE 181
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEV 96
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 55.2 bits (127), Expect = 2e-07
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 99 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPK--KAMAMKKDPVKKIFV 156
Query: 697 GRCT-ENITAEDLREYFGSFGQVQ 765
G E+ T E +REYFG FG+++
Sbjct: 157 GGLNPESPTEEKIREYFGEFGEIE 180
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEV 94
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 55.2 bits (127), Expect = 2e-07
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGFI F + + + L ++ H +DGR D + +K+FV
Sbjct: 99 IKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPK--KAMAMKKDPVKKIFV 156
Query: 697 GRCT-ENITAEDLREYFGSFGQVQ 765
G E+ T E +REYFG FG+++
Sbjct: 157 GGLNPESPTEEKIREYFGEFGEIE 180
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GL W T+++ ++DYF+ FG++
Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEV 94
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 55.2 bits (127), Expect = 2e-07
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVRIP---NGKDGSSTAHRK 687
V RD T S+GFGF+ FA+ + + LG+ H +D + D ++ + T +K
Sbjct: 52 VMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKK 111
Query: 688 VFVGRCTENITAEDLREYFGSFGQVQ 765
+FVG + N ED+++YF FG+V+
Sbjct: 112 IFVGGLSANTVVEDVKQYFEQFGKVE 137
Score = 34.3 bits (75), Expect = 0.49
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W+T+ +++RDYFS FG++
Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEI 47
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 502
AFPR P R + V GL T E V+ YF FG
Sbjct: 96 AFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFG 134
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 55.2 bits (127), Expect = 2e-07
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVRIP---NGKDGSSTAHRK 687
V RD T S+GFGF+ FA+ + + LG+ H +D + D ++ + T +K
Sbjct: 48 VMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKK 107
Query: 688 VFVGRCTENITAEDLREYFGSFGQVQ 765
+FVG + N ED+++YF FG+V+
Sbjct: 108 IFVGGLSANTVVEDVKQYFEQFGKVE 133
Score = 35.5 bits (78), Expect = 0.21
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 428 SDLIVLGLPWKTTEEAVRDYFSSFGDL 508
S + + GL W+T+ +++RDYFS FG++
Sbjct: 17 SKMFIGGLSWQTSPDSLRDYFSKFGEI 43
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 502
AFPR P R + V GL T E V+ YF FG
Sbjct: 92 AFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFG 130
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 107 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 165
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 166 GGLSPDTPEEKIREYFGGFGEVE 188
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 78 MFIGGLSWDTTKKDLKDYFSKFGEV 102
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQV 762
K+F+G + + T +DL++YF FG+V
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEV 102
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 107 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 165
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 166 GGLSPDTPEEKIREYFGGFGEVE 188
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 78 MFIGGLSWDTTKKDLKDYFSKFGEV 102
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 68 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 102
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 186
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 187 GGLSPDTPEEKIREYFGGFGEVE 209
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 37 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 95
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 96 GGLSPDTPEEKIREYFGGFGEVE 118
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 8 MFIGGLSWDTTKKDLKDYFSKFGEV 32
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQV 762
K+F+G + + T +DL++YF FG+V
Sbjct: 7 KMFIGGLSWDTTKKDLKDYFSKFGEV 32
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 186
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 187 GGLSPDTPEEKIREYFGGFGEVE 209
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 40 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 98
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 99 GGLSPDTPEEKIREYFGGFGEVE 121
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 11 MFIGGLSWDTTKKDLKDYFSKFGEV 35
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQV 762
K+F+G + + T +DL++YF FG+V
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFGEV 35
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 186
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 187 GGLSPDTPEEKIREYFGGFGEVE 209
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 186
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 187 GGLSPDTPEEKIREYFGGFGEVE 209
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 186
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 187 GGLSPDTPEEKIREYFGGFGEVE 209
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 120 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 178
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 179 GGLSPDTPEEKIREYFGGFGEVE 201
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 91 MFIGGLSWDTTKKDLKDYFSKFGEV 115
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 81 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 115
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 109 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 167
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 168 GGLSPDTPEEKIREYFGGFGEVE 190
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 80 MFIGGLSWDTTKKDLKDYFSKFGEV 104
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQV 762
K+F+G + + T +DL++YF FG+V
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEV 104
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 186
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 187 GGLSPDTPEEKIREYFGGFGEVE 209
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 186
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 187 GGLSPDTPEEKIREYFGGFGEVE 209
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
+K D TG S+GFGF+ F E E+ + + ++ H ++G+ D + +K+FV
Sbjct: 128 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPV-KKIFV 186
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G + + E +REYFG FG+V+
Sbjct: 187 GGLSPDTPEEKIREYFGGFGEVE 209
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ + GL W TT++ ++DYFS FG++
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 667 SSTAHR---KVFVGRCTENITAEDLREYFGSFGQV 762
++TA R K+F+G + + T +DL++YF FG+V
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEV 123
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 53.6 bits (123), Expect = 7e-07
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVRIP---NGKDGSSTAHRK 687
V RD T S+GFGF+ F + + L + RH +D + D ++ + T +K
Sbjct: 51 VMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKK 110
Query: 688 VFVGRCTENITAEDLREYFGSFGQV 762
+FVG + N T ED+++YF FG+V
Sbjct: 111 IFVGGLSVNTTVEDVKQYFEQFGKV 135
Score = 35.9 bits (79), Expect = 0.16
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 392 PRAESPP-PRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
P SP P C + + GL W+TT+E +R+YF FG++
Sbjct: 8 PGLASPDSPHDPCK-MFIGGLSWQTTQEGLREYFGQFGEV 46
Score = 34.3 bits (75), Expect = 0.49
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQ 765
K+F+G + T E LREYFG FG+V+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVK 47
Score = 33.5 bits (73), Expect = 0.85
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 502
AFPR P R + V GL TT E V+ YF FG
Sbjct: 95 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 133
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 53.6 bits (123), Expect = 7e-07
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVRIP---NGKDGSSTAHRK 687
V RD T S+GFGF+ F + + L + RH +D + D ++ + T +K
Sbjct: 51 VMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKK 110
Query: 688 VFVGRCTENITAEDLREYFGSFGQV 762
+FVG + N T ED+++YF FG+V
Sbjct: 111 IFVGGLSVNTTVEDVKQYFEQFGKV 135
Score = 35.9 bits (79), Expect = 0.16
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 392 PRAESPP-PRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
P SP P C + + GL W+TT+E +R+YF FG++
Sbjct: 8 PGLASPDSPHDPCK-MFIGGLSWQTTQEGLREYFGQFGEV 46
Score = 34.3 bits (75), Expect = 0.49
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQ 765
K+F+G + T E LREYFG FG+V+
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVK 47
Score = 33.5 bits (73), Expect = 0.85
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 502
AFPR P R + V GL TT E V+ YF FG
Sbjct: 95 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 133
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 52.4 bits (120), Expect = 2e-06
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF FG++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQFGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 52.4 bits (120), Expect = 2e-06
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF FG++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQFGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 52.0 bits (119), Expect = 2e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEY-EAQLRALGRRHMIDGRWCD-----VRIPNGKDGSSTAH 681
V RD + S+GFGF+ F+ E R H IDGR + R +GK G+
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
+K+FVG E+ LR+YF +G++
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKI 126
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 52.0 bits (119), Expect = 2e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEY-EAQLRALGRRHMIDGRWCD-----VRIPNGKDGSSTAH 681
V RD + S+GFGF+ F+ E R H IDGR + R +GK G+
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
+K+FVG E+ LR+YF +G++
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKI 126
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 52.0 bits (119), Expect = 2e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEY-EAQLRALGRRHMIDGRWCD-----VRIPNGKDGSSTAH 681
V RD + S+GFGF+ F+ E R H IDGR + R +GK G+
Sbjct: 52 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 111
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
+K+FVG E+ LR+YF +G++
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEEYGKI 138
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 52.0 bits (119), Expect = 2e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEY-EAQLRALGRRHMIDGRWCD-----VRIPNGKDGSSTAH 681
V RD + S+GFGF+ F+ E R H IDGR + R +GK G+
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
+K+FVG E+ LR+YF +G++
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKI 126
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 52.0 bits (119), Expect = 2e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEY-EAQLRALGRRHMIDGRWCD-----VRIPNGKDGSSTAH 681
V RD + S+GFGF+ F+ E R H IDGR + R +GK G+
Sbjct: 52 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 111
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
+K+FVG E+ LR+YF +G++
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEEYGKI 138
>BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein.
Length = 249
Score = 52.0 bits (119), Expect = 2e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEY-EAQLRALGRRHMIDGRWCD-----VRIPNGKDGSSTAH 681
V RD + S+GFGF+ F+ E R H IDGR + R +GK G+
Sbjct: 40 VMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTV 99
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQV 762
+K+FVG E+ LR+YF +G++
Sbjct: 100 KKLFVGGIKEDTEEHHLRDYFEEYGKI 126
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 23 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 82
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 83 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 111
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ R H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
++ESP + L + GL ++TT+E++R +F +G L
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTL 40
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDV-----RIPNGKDGSSTAH 681
V RD +T S+GFGF+ ++ E A+ R H +DGR + R + K G+
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQ 765
+K+FVG E+ +LR+YF +G+++
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIE 153
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDV-----RIPNGKDGSSTAH 681
V RD +T S+GFGF+ ++ E A+ R H +DGR + R + K G+
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQ 765
+K+FVG E+ +LR+YF +G+++
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIE 153
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDV-----RIPNGKDGSSTAH 681
V RD +T S+GFGF+ ++ E A+ R H +DGR + R + K G+
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQ 765
+K+FVG E+ +LR+YF +G+++
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIE 153
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AH--- 681
V RD T S+GFGF+ +A E A+ H +DGR + + ++ S AH
Sbjct: 45 VMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV 104
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQM 768
+K+FVG E+ LR+YF +G++++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDV-----RIPNGKDGSSTAH 681
V RD +T S+GFGF+ ++ E A+ R H +DGR + R + K G+
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQ 765
+K+FVG E+ +LR+YF +G+++
Sbjct: 126 KKIFVGGIKEDTEEYNLRDYFEKYGKIE 153
>S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein.
Length = 269
Score = 46.0 bits (104), Expect = 1e-04
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM-IDGRWCDV-----RIPNGKDGSSTAH 681
V RD +T S+GFGF+ ++ A+G R +DGR + R + K G+
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVTEVDAAIGARPFKVDGRVVEPKRAVSREDSVKPGAHLTV 125
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQ 765
+K+FVG E+ +LR+YF +G+++
Sbjct: 126 KKIFVGSIKEDTEEYNLRDYFEKYGKIE 153
>EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2
protein.
Length = 260
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +3
Query: 168 MTEYVPVSEGEQDEPIELPTEEDGSLLLS 254
M+EY+ V+E E DEPIE+P+E+DG++LLS
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLS 29
>BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein.
Length = 448
Score = 43.6 bits (98), Expect = 8e-04
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKV 690
V +D TG+ KG F+ + E E+ L+A H + G +++ S RK+
Sbjct: 85 VLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKL 144
Query: 691 FVGRCTENITAEDLREYFGSFGQVQ 765
FVG + + +D+R F +FG ++
Sbjct: 145 FVGMLNKQQSEDDVRRLFEAFGNIE 169
>AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein
BRUNOL4 protein.
Length = 294
Score = 43.6 bits (98), Expect = 8e-04
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKV 690
V +D TG+ KG F+ + E E+ L+A H + G +++ S RK+
Sbjct: 85 VLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKL 144
Query: 691 FVGRCTENITAEDLREYFGSFGQVQ 765
FVG + + +D+R F +FG ++
Sbjct: 145 FVGMLNKQQSEDDVRRLFEAFGNIE 169
>AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ90115 fis, clone HEMBA1006770, weakly similar to
FLOWERING TIME CONTROL PROTEIN FCA. ).
Length = 484
Score = 43.2 bits (97), Expect = 0.001
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Frame = +1
Query: 427 LRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG 606
++ + R+ D + L + + V +D TG+ KG F+ + E E+ L+A
Sbjct: 54 IKLFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQS 113
Query: 607 RRH---MIDGRWCDVRIP----NGKDGSST-----AHRKVFVGRCTENITAEDLREYFGS 750
H + G +++ + GSS +HRK+FVG + + ED+R F +
Sbjct: 114 ALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEEDVRRLFEA 173
Query: 751 FGQVQ 765
FG ++
Sbjct: 174 FGNIE 178
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 42.7 bits (96), Expect = 0.001
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVR--IPNG--------KDG 666
+ +D T S+GFGF+KF + L R H +DGR D + P G K+G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 667 -------SSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
++ K+FVG N +LREYF FG V
Sbjct: 101 WQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVV 139
Score = 34.7 bits (76), Expect = 0.37
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
L V GL W TT+E +R YFS +G++
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEV 36
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 42.7 bits (96), Expect = 0.001
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVR--IPNG--------KDG 666
+ +D T S+GFGF+KF + L R H +DGR D + P G K+G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 667 -------SSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
++ K+FVG N +LREYF FG V
Sbjct: 101 WQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVV 139
Score = 34.7 bits (76), Expect = 0.37
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
L V GL W TT+E +R YFS +G++
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEV 36
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 42.3 bits (95), Expect = 0.002
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVR--IPNG--------KDG 666
+ +D T S+GFGF+KF + L R H +DGR D + P G K+G
Sbjct: 41 IMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
Query: 667 SSTAHR-------KVFVGRCTENITAEDLREYFGSFGQV 762
R K+FVG N +LREYF FG V
Sbjct: 101 WQKGPRSDYSKSNKIFVGGIPHNCGETELREYFKKFGVV 139
Score = 34.7 bits (76), Expect = 0.37
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
L V GL W TT+E +R YFS +G++
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEV 36
>BC004145-1|AAH04145.2| 291|Homo sapiens TNRC4 protein protein.
Length = 291
Score = 41.9 bits (94), Expect = 0.002
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++ D S
Sbjct: 24 RIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPA-DSES 82
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RK+FVG + T ED+R+ F FG +
Sbjct: 83 RGDRKLFVGMLGKQQTDEDVRKMFEPFGTI 112
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 41.9 bits (94), Expect = 0.002
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++ D S
Sbjct: 33 RIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPA-DSES 91
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RK+FVG + T ED+R+ F FG +
Sbjct: 92 RGDRKLFVGMLGKQQTDEDVRKMFEPFGTI 121
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++ S
Sbjct: 32 RIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RK+FVG + T ED+R+ F FG +
Sbjct: 92 GEDRKLFVGMLGKQQTDEDVRKMFEPFGTI 121
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++ S
Sbjct: 32 RIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RK+FVG + T ED+R+ F FG +
Sbjct: 92 GEDRKLFVGMLGKQQTDEDVRKMFEPFGTI 121
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++ S
Sbjct: 32 RIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RK+FVG + T ED+R+ F FG +
Sbjct: 92 GEDRKLFVGMLGKQQTDEDVRKMFEPFGTI 121
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++ S
Sbjct: 32 RIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RK+FVG + T ED+R+ F FG +
Sbjct: 92 GEDRKLFVGMLGKQQTDEDVRKMFEPFGTI 121
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++ S
Sbjct: 32 RIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RK+FVG + T ED+R+ F FG +
Sbjct: 92 GEDRKLFVGMLGKQQTDEDVRKMFEPFGTI 121
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++ S
Sbjct: 32 RIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESR 91
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RK+FVG + T ED+R+ F FG +
Sbjct: 92 GEDRKLFVGMLGKQQTDEDVRKMFEPFGTI 121
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 559 GFIKFAEYEAQLRALGR-RHMIDGRWCDVRIP---NGKDGSSTAHRKVFVGRCTENITAE 726
GF+ F + + L + RH +D + D ++ + T +K+FVG + N T E
Sbjct: 1 GFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVE 60
Query: 727 DLREYFGSFGQV 762
D+++YF FG+V
Sbjct: 61 DVKQYFEQFGKV 72
Score = 33.5 bits (73), Expect = 0.85
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 502
AFPR P R + V GL TT E V+ YF FG
Sbjct: 32 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 70
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 559 GFIKFAEYEAQLRALGR-RHMIDGRWCDVRIP---NGKDGSSTAHRKVFVGRCTENITAE 726
GF+ F + + L + RH +D + D ++ + T +K+FVG + N T E
Sbjct: 1 GFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVE 60
Query: 727 DLREYFGSFGQV 762
D+++YF FG+V
Sbjct: 61 DVKQYFEQFGKV 72
Score = 33.5 bits (73), Expect = 0.85
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 502
AFPR P R + V GL TT E V+ YF FG
Sbjct: 32 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 70
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 559 GFIKFAEYEAQLRALGR-RHMIDGRWCDVRIP---NGKDGSSTAHRKVFVGRCTENITAE 726
GF+ F + + L + RH +D + D ++ + T +K+FVG + N T E
Sbjct: 1 GFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVE 60
Query: 727 DLREYFGSFGQV 762
D+++YF FG+V
Sbjct: 61 DVKQYFEQFGKV 72
Score = 33.5 bits (73), Expect = 0.85
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 502
AFPR P R + V GL TT E V+ YF FG
Sbjct: 32 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 70
>BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 40.7 bits (91), Expect = 0.006
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP----NGKDGSST- 675
V +D TG+ KG F+ + E E+ L+A H + G +++ + GSS
Sbjct: 85 VLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCL 144
Query: 676 ----AHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
+HRK+FVG + + +D+R F +FG ++
Sbjct: 145 RQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIE 178
>BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 40.7 bits (91), Expect = 0.006
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP----NGKDGSST- 675
V +D TG+ KG F+ + E E+ L+A H + G +++ + GSS
Sbjct: 85 VLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCL 144
Query: 676 ----AHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
+HRK+FVG + + +D+R F +FG ++
Sbjct: 145 RQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIE 178
>AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein
protein.
Length = 544
Score = 39.9 bits (89), Expect = 0.010
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRI-PNGKDGSSTAHRKVFVGRCTEN 714
SKG F+ F +A L A H ++ G +++ P + ++ RK+F+G ++
Sbjct: 117 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKK 176
Query: 715 ITAEDLREYFGSFGQVQ 765
T D+R F SFGQ++
Sbjct: 177 CTENDIRVMFSSFGQIE 193
>BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA binding
protein (Drosophila) protein.
Length = 481
Score = 38.7 bits (86), Expect = 0.023
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++
Sbjct: 71 RIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR 130
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
RK+FVG + ED+R F FG ++
Sbjct: 131 GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
>AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CELF6
protein.
Length = 481
Score = 38.7 bits (86), Expect = 0.023
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++
Sbjct: 71 RIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR 130
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
RK+FVG + ED+R F FG ++
Sbjct: 131 GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
>AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-binding
protein protein.
Length = 481
Score = 38.7 bits (86), Expect = 0.023
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSS 672
R + V +D TGL KG F+ + ++ L+A H + G +++
Sbjct: 71 RIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGR 130
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
RK+FVG + ED+R F FG ++
Sbjct: 131 GEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 37.9 bits (84), Expect = 0.040
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 610 RHMIDGRWCDVRIP---NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
RH +D + D ++ + T +K+FVG + N T ED+++YF FG+V
Sbjct: 16 RHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 69
Score = 33.5 bits (73), Expect = 0.85
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 502
AFPR P R + V GL TT E V+ YF FG
Sbjct: 29 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 67
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP--NGKDGSSTAHRKVFVGRCTE 711
SKG F+ F +A L A H ++ G +++ + + ++ RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
T D+R F SFGQ++
Sbjct: 118 KCTENDIRVMFSSFGQIE 135
>U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA
binding protein 1 protein.
Length = 483
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP--NGKDGSSTAHRKVFVGRCTE 711
SKG F+ F +A L A H ++ G +++ + + ++ RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
T D+R F SFGQ++
Sbjct: 118 KCTENDIRVMFSSFGQIE 135
>BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.052
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVRIPNGKDGSST--AHRKV---FV 696
+T S+ FGF+ ++ E A+ H +DG +++ ++ S+ AH KV FV
Sbjct: 43 QTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFV 102
Query: 697 GRCTENITAEDLREYFGSFGQVQ 765
G ++ DL E+F FG V+
Sbjct: 103 GGLKGDVAEGDLIEHFSQFGTVE 125
>AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor
CUG-BP protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP--NGKDGSSTAHRKVFVGRCTE 711
SKG F+ F +A L A H ++ G +++ + + ++ RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
T D+R F SFGQ++
Sbjct: 118 KCTENDIRVMFSSFGQIE 135
>AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A
isoform protein.
Length = 483
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP--NGKDGSSTAHRKVFVGRCTE 711
SKG F+ F +A L A H ++ G +++ + + ++ RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
T D+R F SFGQ++
Sbjct: 118 KCTENDIRVMFSSFGQIE 135
>AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYLQ
isoform protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP--NGKDGSSTAHRKVFVGRCTE 711
SKG F+ F +A L A H ++ G +++ + + ++ RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
T D+R F SFGQ++
Sbjct: 118 KCTENDIRVMFSSFGQIE 135
>AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein
BRUNOL2 protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.052
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP--NGKDGSSTAHRKVFVGRCTE 711
SKG F+ F +A L A H ++ G +++ + + ++ RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
T D+R F SFGQ++
Sbjct: 118 KCTENDIRVMFSSFGQIE 135
>BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein.
Length = 402
Score = 37.1 bits (82), Expect = 0.069
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = +1
Query: 463 DRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA---LGRRHMIDGRW 633
D + LL R + V +D TG+ KG F+ + ++ ++A L + + G
Sbjct: 57 DEKDLKPLLEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMA 116
Query: 634 CDVRI-PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
+++ P + RK+FVG + + ED+ F FG +
Sbjct: 117 RPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVI 160
>AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like
factor 4 protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.12
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP----NGKDGSS-- 672
V +D TG+ KG F+ + E E+ L+A H + G +++ + GSS
Sbjct: 85 VLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCL 144
Query: 673 ----TAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
+ RK+FVG + + +D+R F +FG ++
Sbjct: 145 RQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 179
>AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA binding
protein variant protein.
Length = 510
Score = 36.3 bits (80), Expect = 0.12
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Frame = +1
Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIP----NGKDGSS-- 672
V +D TG+ KG F+ + E E+ L+A H + G +++ + GSS
Sbjct: 110 VLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCL 169
Query: 673 ----TAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
+ RK+FVG + + +D+R F +FG ++
Sbjct: 170 RQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 204
>BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA binding
protein (Drosophila) protein.
Length = 485
Score = 35.5 bits (78), Expect = 0.21
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +1
Query: 463 DRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA---LGRRHMIDGRW 633
D + L R + V +D TG+ KG F+ + ++ ++A L + + G
Sbjct: 57 DEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMA 116
Query: 634 CDVRI-PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
+++ P + RK+FVG + + ED+ F FG +
Sbjct: 117 RPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVI 160
>AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like
factor 5 protein.
Length = 481
Score = 35.5 bits (78), Expect = 0.21
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +1
Query: 463 DRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA---LGRRHMIDGRW 633
D + L R + V +D TG+ KG F+ + ++ ++A L + + G
Sbjct: 57 DEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMA 116
Query: 634 CDVRI-PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
+++ P + RK+FVG + + ED+ F FG +
Sbjct: 117 RPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVI 160
>AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA binding
protein variant protein.
Length = 421
Score = 35.5 bits (78), Expect = 0.21
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +1
Query: 463 DRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA---LGRRHMIDGRW 633
D + L R + V +D TG+ KG F+ + ++ ++A L + + G
Sbjct: 69 DEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMA 128
Query: 634 CDVRI-PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
+++ P + RK+FVG + + ED+ F FG +
Sbjct: 129 RPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVI 172
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 35.1 bits (77), Expect = 0.28
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
R +Q+ D+ TG SKG+GFI F++ E +AL
Sbjct: 275 RIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.28
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
R +Q+ D+ TG SKG+GFI F++ E +AL
Sbjct: 275 RIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 35.1 bits (77), Expect = 0.28
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
R +Q+ D+ TG SKG+GFI F++ E +AL
Sbjct: 118 RIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 151
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 35.1 bits (77), Expect = 0.28
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
R +Q+ D+ TG SKG+GFI F++ E +AL
Sbjct: 275 RIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 35.1 bits (77), Expect = 0.28
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
R +Q+ D+ TG SKG+GFI F++ E +AL
Sbjct: 253 RIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 286
>BC066549-1|AAH66549.1| 474|Homo sapiens RNA binding motif protein
45 protein.
Length = 474
Score = 35.1 bits (77), Expect = 0.28
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHR 684
+ V RD T SKG F+KFA RA+ H + +++ + SS +HR
Sbjct: 54 IWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIKVFIAQSRSSGSHR 113
Query: 685 --------KVFVGRCTENITAEDLREYFGSFGQVQ 765
++FV ++ T EDLRE F +G ++
Sbjct: 114 DVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIE 147
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.28
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
R +Q+ D+ TG SKG+GFI F++ E +AL
Sbjct: 275 RIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 35.1 bits (77), Expect = 0.28
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 502 RFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
R +Q+ D+ TG SKG+GFI F++ E +AL
Sbjct: 275 RIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308
>AF526533-1|AAM88417.1| 328|Homo sapiens putative RNA binding
protein RB-1 protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.28
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHR 684
+ V RD T SKG F+KFA RA+ H + +++ + SS +HR
Sbjct: 54 IWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIKVFIAQSRSSGSHR 113
Query: 685 --------KVFVGRCTENITAEDLREYFGSFGQVQ 765
++FV ++ T EDLRE F +G ++
Sbjct: 114 DVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIE 147
>AB036991-1|BAC16207.1| 476|Homo sapiens developmentally regulated
RNA-binding protein 1 protein.
Length = 476
Score = 35.1 bits (77), Expect = 0.28
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHR 684
+ V RD T SKG F+KFA RA+ H + +++ + SS +HR
Sbjct: 54 IWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIKVFIAQSRSSGSHR 113
Query: 685 --------KVFVGRCTENITAEDLREYFGSFGQVQ 765
++FV ++ T EDLRE F +G ++
Sbjct: 114 DVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIE 147
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 34.7 bits (76), Expect = 0.37
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQ 765
+K+FVG + + E +REYFG FG+V+
Sbjct: 172 KKIFVGGLSPDTPEEKIREYFGGFGEVE 199
>BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein.
Length = 151
Score = 34.7 bits (76), Expect = 0.37
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 673 TAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
T +K+FVG + N ED+++YF FG+V+
Sbjct: 3 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 33
>BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein.
Length = 450
Score = 34.3 bits (75), Expect = 0.49
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 505 FVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
F+ +V RD RTG +KG+GF+ F + +RA+
Sbjct: 377 FLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAM 409
>BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein
MGC10433 protein.
Length = 480
Score = 34.3 bits (75), Expect = 0.49
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 505 FVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
F+ +V RD RTG +KG+GF+ F + +RA+
Sbjct: 407 FLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAM 439
>BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein.
Length = 451
Score = 34.3 bits (75), Expect = 0.49
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 505 FVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
F+ +V RD RTG +KG+GF+ F + +RA+
Sbjct: 378 FLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAM 410
>AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.49
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 505 FVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
F+ +V RD RTG +KG+GF+ F + +RA+
Sbjct: 266 FLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAM 298
>U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNOL3
protein.
Length = 490
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 562 FIKFAEYE---AQLRALGRRHMIDGRWCDVR---IPNGKDGSSTAHRKVFVGRCTENITA 723
F++F E+ A L A+ R ++ G+ V P+ + ++ H VFVG + IT
Sbjct: 52 FVEFYEHRDAAAALAAMNGRKIL-GKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITT 110
Query: 724 EDLREYFGSFGQV 762
ED++ F FG++
Sbjct: 111 EDIKSAFAPFGKI 123
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 562 FIKFAEYE---AQLRALGRRHMIDGRWCDVR---IPNGKDGSSTAHRKVFVGRCTENITA 723
F++F E+ A L A+ R ++ G+ V P+ + ++ H VFVG + IT
Sbjct: 13 FVEFYEHRDAAAALAAMNGRKIL-GKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITT 71
Query: 724 EDLREYFGSFGQV 762
ED++ F FG++
Sbjct: 72 EDIKSAFAPFGKI 84
>BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein.
Length = 521
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 77 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 136
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 137 KCNENDIRVMFSPFGQIE 154
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 562 FIKFAEYE---AQLRALGRRHMIDGRWCDVR---IPNGKDGSSTAHRKVFVGRCTENITA 723
F++F E+ A L A+ R ++ G+ V P+ + ++ H VFVG + IT
Sbjct: 52 FVEFYEHRDAAAALAAMNGRKIL-GKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITT 110
Query: 724 EDLREYFGSFGQV 762
ED++ F FG++
Sbjct: 111 EDIKSAFAPFGKI 123
>AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 490
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA
binding protein 2 protein.
Length = 498
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma
apoptosis-related RNA-binding protein isoform 4 protein.
Length = 488
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 3 protein.
Length = 484
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 1 protein.
Length = 490
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma
apoptosis-related RNA-binding protein 2 protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 77 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 136
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 137 KCNENDIRVMFSPFGQIE 154
>AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 77 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 136
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 137 KCNENDIRVMFSPFGQIE 154
>AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA
binding protein protein.
Length = 508
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 82 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 141
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 142 KCNENDIRVMFSPFGQIE 159
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.85
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALG 606
+ + +D+ TG SKG+GFI F++ E RA G
Sbjct: 276 IVLMKDSDTGRSKGYGFITFSDSECARRACG 306
>AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma
apoptosis-related RNA binding protein protein.
Length = 490
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRHMID---GRWCDVRIPNGKDGSSTA--HRKVFVGRCTE 711
SKG F+ F +A L A H I G +++ S A RK+F+G ++
Sbjct: 58 SKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 117
Query: 712 NITAEDLREYFGSFGQVQ 765
D+R F FGQ++
Sbjct: 118 KCNENDIRVMFSPFGQIE 135
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
+ + +D+ TG SKG+GFI F++ E RAL
Sbjct: 276 IVLMKDSDTGRSKGYGFITFSDSECARRAL 305
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
+ + +D+ TG SKG+GFI F++ E RAL
Sbjct: 276 IVLMKDSDTGRSKGYGFITFSDSECARRAL 305
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
+ + +D+ TG SKG+GFI F++ E RAL
Sbjct: 258 IVLMKDSDTGRSKGYGFITFSDSECARRAL 287
>AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein.
Length = 1207
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 78 QELGLNQSLKAVRVDKRDEEVEGQRWSVSKMTEYVPVSEGEQDEPI---ELPTEEDGSLL 248
Q G ++ +++V +E VEG+ S S++ P SEGE+DE + ELP G+
Sbjct: 75 QAAGSSREVRSVAPVPLEEPVEGR--SESRLRP-PPPSEGEEDEELESQELPRGSSGAAA 131
Query: 249 LSPWQRSSQVP 281
LSP +S P
Sbjct: 132 LSPGAPASWQP 142
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
+ + +D+ TG SKG+GFI F++ E RAL
Sbjct: 270 IVLMKDSDTGRSKGYGFITFSDSECARRAL 299
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQM 768
KV +GR T N+T + + E F ++G+++M
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKM 189
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQM 768
KV +GR T N+T + + E F ++G+++M
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKM 189
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQM 768
KV +GR T N+T + + E F ++G+++M
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKM 189
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQM 768
KV +GR T N+T + + E F ++G+++M
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKM 189
>AF277292-1|AAF97236.1| 93|Homo sapiens unknown protein.
Length = 93
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 338 RLSPPAEGWPAYRYWCAFPRAESPPPRP 421
R SPPA WP+ + WC P A+S P P
Sbjct: 11 RTSPPATPWPS-QAWCIDPHAQSLQPGP 37
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQM 768
KV +GR T N+T + + E F ++G+++M
Sbjct: 139 KVHIGRLTRNVTKDHIMEIFSTYGKIKM 166
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQM 768
KV +GR T N+T + + E F ++G+++M
Sbjct: 85 KVHIGRLTRNVTKDHIMEIFSTYGKIKM 112
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 32.7 bits (71), Expect = 1.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 685 KVFVGRCTENITAEDLREYFGSFGQVQM 768
KV +GR T N+T + + E F ++G+++M
Sbjct: 162 KVHIGRLTRNVTKDHIMEIFSTYGKIKM 189
>X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein.
Length = 230
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GLP+ TT+ ++R YF FGD+
Sbjct: 27 IFVGGLPYHTTDASLRKYFEGFGDI 51
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 607 RRHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
RR + R+ +V +P T K+FVG + T LR+YF FG ++
Sbjct: 1 RRMQYNRRFVNV-VPTFGKKKGTTFTKIFVGGLPYHTTDASLRKYFEGFGDIE 52
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 529 DTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRI 648
D +TG S+G+GF+ A+ A RA +IDGR +V +
Sbjct: 59 DRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNL 99
>X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein.
Length = 229
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GLP+ TT+ ++R YF FGD+
Sbjct: 26 IFVGGLPYHTTDASLRKYFEGFGDI 50
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 529 DTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRI 648
D +TG S+G+GF+ A+ A RA +IDGR +V +
Sbjct: 58 DRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNL 98
>BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein.
Length = 216
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GLP+ TT+ ++R YF FGD+
Sbjct: 13 IFVGGLPYHTTDASLRKYFEGFGDI 37
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 529 DTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRI 648
D +TG S+G+GF+ A+ A RA +IDGR +V +
Sbjct: 45 DRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNL 85
>AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen
KW-5 protein.
Length = 216
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
+ V GLP+ TT+ ++R YF FGD+
Sbjct: 13 IFVGGLPYHTTDASLRKYFEGFGDI 37
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 529 DTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRI 648
D +TG S+G+GF+ A+ A RA +IDGR +V +
Sbjct: 45 DRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNL 85
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 630
V+V RD +G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 228 VKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267
>BC039879-1|AAH39879.1| 177|Homo sapiens TRSPAP1 protein protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRAL 603
+TG+SKG+GF+KF + Q RAL
Sbjct: 22 QTGVSKGYGFVKFTDELEQKRAL 44
>BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine
associated protein 1 protein.
Length = 287
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRAL 603
+TG+SKG+GF+KF + Q RAL
Sbjct: 132 QTGVSKGYGFVKFTDELEQKRAL 154
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 630
V+V RD +G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 64 VKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 103
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 630
V+V RD +G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 228 VKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267
>AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine
associated protein (SECP43) protein.
Length = 287
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRAL 603
+TG+SKG+GF+KF + Q RAL
Sbjct: 132 QTGVSKGYGFVKFTDELEQKRAL 154
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 630
V+V RD +G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 213 VKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 252
>AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ20503 fis, clone KAT09346. ).
Length = 287
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 535 RTGLSKGFGFIKFAEYEAQLRAL 603
+TG+SKG+GF+KF + Q RAL
Sbjct: 132 QTGVSKGYGFVKFTDELEQKRAL 154
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 630
V+V RD +G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 228 VKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDV---RIPNGKDGSSTAHRK----VFVG 699
SKG+GF+ F +EA RA+ + + +++GR V + ++ A K V++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 700 RCTENITAEDLREYFGSFG 756
E++ E L++ FG FG
Sbjct: 197 NFGEDMDDERLKDLFGKFG 215
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDV---RIPNGKDGSSTAHRK----VFVG 699
SKG+GF+ F +EA RA+ + + +++GR V + ++ A K V++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 700 RCTENITAEDLREYFGSFG 756
E++ E L++ FG FG
Sbjct: 197 NFGEDMDDERLKDLFGKFG 215
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDV---RIPNGKDGSSTAHRK----VFVG 699
SKG+GF+ F +EA RA+ + + +++GR V + ++ A K V++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 700 RCTENITAEDLREYFGSFG 756
E++ E L++ FG FG
Sbjct: 197 NFGEDMDDERLKDLFGKFG 215
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDV---RIPNGKDGSSTAHRK----VFVG 699
SKG+GF+ F +EA RA+ + + +++GR V + ++ A K V++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 700 RCTENITAEDLREYFGSFG 756
E++ E L++ FG FG
Sbjct: 197 NFGEDMDDERLKDLFGKFG 215
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +1
Query: 547 SKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDV---RIPNGKDGSSTAHRK----VFVG 699
SKG+GF+ F +EA RA+ + + +++GR V + ++ A K V++
Sbjct: 137 SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIK 196
Query: 700 RCTENITAEDLREYFGSFG 756
E++ E L++ FG FG
Sbjct: 197 NFGEDMDDERLKDLFGKFG 215
>EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-related
and time keeping constitutive hydroquinone (NADH) oxid
protein.
Length = 643
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = +2
Query: 389 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
FP+ + PPP P C + V GLP TEE +++ F GD+
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDI 168
>BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein.
Length = 643
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = +2
Query: 389 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
FP+ + PPP P C + V GLP TEE +++ F GD+
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDI 168
>AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing
protein 38 protein.
Length = 643
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = +2
Query: 389 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
FP+ + PPP P C + V GLP TEE +++ F GD+
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDI 168
>AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = +2
Query: 389 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
FP+ + PPP P C + V GLP TEE +++ F GD+
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDI 168
>AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = +2
Query: 389 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
FP+ + PPP P C + V GLP TEE +++ F GD+
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDI 168
>AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = +2
Query: 389 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
FP+ + PPP P C + V GLP TEE +++ F GD+
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDI 168
>AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens
cDNA FLJ10094 fis, clone HEMBA1002419. ).
Length = 643
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = +2
Query: 389 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
FP+ + PPP P C + V GLP TEE +++ F GD+
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDI 168
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
+ + +D+ TG SKG+G I F++ E RAL
Sbjct: 276 IVLMKDSDTGRSKGYGLITFSDSECARRAL 305
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 661 DGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
D S RK+FVG + T ED+R+ F FG +
Sbjct: 30 DSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTI 63
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 403 IAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEY 582
+ A + Y E D S L + + V+V RD G SKGFGF+ + ++
Sbjct: 183 LGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKH 241
Query: 583 EAQLRAL 603
E +A+
Sbjct: 242 EDANKAV 248
>AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ44762 fis, clone BRACE3031743, moderately
similar to Homo sapiens bruno-like 4, RNA binding
protein. ).
Length = 250
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 661 DGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
D S RK+FVG + + +D+R F +FG ++
Sbjct: 11 DSESRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 45
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 30.7 bits (66), Expect = 6.0
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 553 GFGFIKFAEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITA 723
G F+ + ++ L+A H + G +++ S RK+FVG + T
Sbjct: 25 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 84
Query: 724 EDLREYFGSFGQV 762
ED+R+ F FG +
Sbjct: 85 EDVRKMFEPFGTI 97
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 436 YSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
Y E D S L + + V+V RD G SKGFGF+ + ++E +A+
Sbjct: 5 YIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDANKAV 59
>BC014944-1|AAH14944.1| 672|Homo sapiens SLTM protein protein.
Length = 672
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 652 NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
+G GSST + ++V + N A DL+ FG +G+V
Sbjct: 14 SGSSGSST--KNIWVSGLSSNTKAADLKNLFGKYGKV 48
>AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein.
Length = 236
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 529 DTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRI 648
D +TG S+G+GF+ A+ A RA +IDGR +V +
Sbjct: 45 DRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNL 85
>AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA
sequence from clone RP1-259A10 on chromosome 6p22.1-23
Contains the gene for an ssDNA binding protein and a CpG
island. ).
Length = 236
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 529 DTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRI 648
D +TG S+G+GF+ A+ A RA +IDGR +V +
Sbjct: 45 DRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNL 85
>AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ37697 fis, clone BRHIP2015360, highly similar to
Xenopus laevis RRM-containing protein SEB-4 mRNA. ).
Length = 211
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 529 DTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRI 648
D +TG S+G+GF+ A+ A RA +IDGR +V +
Sbjct: 45 DRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNL 85
>AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ32288 fis, clone PROST2000325, highly similar to
Homo sapiens DAZ associated protein 1 (DAZAP1) mRNA. ).
Length = 289
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 655 GKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
G ++ K+FVG N +LREYF FG V
Sbjct: 15 GPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVV 50
>AK024710-1|BAB14971.1| 288|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21057 fis, clone CAS00705. ).
Length = 288
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 652 NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
+G GSST + ++V + N A DL+ FG +G+V
Sbjct: 148 SGSSGSST--KNIWVSGLSSNTKAADLKNLFGKYGKV 182
>AK000867-1|BAA91401.1| 511|Homo sapiens protein ( Homo sapiens
cDNA FLJ10005 fis, clone HEMBA1000156. ).
Length = 511
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 652 NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
+G GSST + ++V + N A DL+ FG +G+V
Sbjct: 376 SGSSGSST--KNIWVSGLSSNTKAADLKNLFGKYGKV 410
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,889,224
Number of Sequences: 237096
Number of extensions: 2115147
Number of successful extensions: 7575
Number of sequences better than 10.0: 218
Number of HSP's better than 10.0 without gapping: 6404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7487
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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