Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0012
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   6.5  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.5  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 228 IIKSGKVLGAWPVSFKLSRFN 290
           II   K+LG  P+S+K S  N
Sbjct: 13  IILLSKILGIAPISYKNSNVN 33


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 767 ISILKNVIYGTL 732
           +SIL+N+I GTL
Sbjct: 735 VSILRNIIVGTL 746


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 665 VHRYIRMQPDVLSFRPRR 612
           +HR   + PD+L F P R
Sbjct: 93  LHRNAEIYPDLLKFDPDR 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,824
Number of Sequences: 336
Number of extensions: 3464
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)