Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0011
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1185|AAF52451.1|  253|Drosophila melanogaster CG13773-P...    50   2e-06
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   6.2  

>AE014134-1185|AAF52451.1|  253|Drosophila melanogaster CG13773-PA
           protein.
          Length = 253

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 22/62 (35%), Positives = 37/62 (59%)
 Frame = +3

Query: 258 KNPCILQNVGTIRNDNADIHFQVQADYFIFQPYIGAKLTGLVNKKCSTHLSVLVHRVFNV 437
           KN  +L     +R D+  +H  + AD+++F+P  GA L+G+V      H+S +++RVFN 
Sbjct: 74  KNIKVLGQTAGLRADDPTMHLVINADFYVFRPKAGAILSGVVRHISRHHVSAVIYRVFNT 133

Query: 438 VI 443
            I
Sbjct: 134 SI 135



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = +1

Query: 52  IMSKIIKFDLRELKQLANDKNSCLVVKKITQNLALQPWCLGNIKESITNLL-DYKVGKFD 228
           I+ K IKF ++EL+  A+   SC+       +LA+ P+ + N K ++  LL   KVG +D
Sbjct: 4   ILQKYIKFSVKELENYASSPESCVRCITTDMHLAMGPYGMANFKHALHELLIRTKVGFYD 63

Query: 229 KELNGVLVSIK 261
             L+G+++ IK
Sbjct: 64  SGLDGIVLGIK 74


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +3

Query: 255   YKNPCILQNVGTIRNDNADIHFQVQADYFIFQPYIGAKLTGLVNKKCSTHLSVL 416
             Y+NPC    V   R + A    Q   +Y+   PY G +   ++N  CS+HL+ L
Sbjct: 17964 YQNPCGSNAVCRERGEAASC--QCLPEYY-GNPYEGCRPECVLNSDCSSHLACL 18014


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,008,264
Number of Sequences: 53049
Number of extensions: 504022
Number of successful extensions: 1025
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)