Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0010
(773 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50623| Best HMM Match : NAD_Gly3P_dh_C (HMM E-Value=0) 98 8e-21
SB_49139| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_39311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_13238| Best HMM Match : rve (HMM E-Value=1.1e-13) 31 1.4
SB_59573| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_52945| Best HMM Match : RVT_1 (HMM E-Value=7.2e-19) 31 1.4
SB_19376| Best HMM Match : RVT_1 (HMM E-Value=6.7e-16) 31 1.4
SB_52813| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29) 29 4.2
SB_34159| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_16288| Best HMM Match : Dabb (HMM E-Value=3) 28 9.6
>SB_50623| Best HMM Match : NAD_Gly3P_dh_C (HMM E-Value=0)
Length = 358
Score = 97.9 bits (233), Expect = 8e-21
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +3
Query: 510 IKFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVAEAFVKTGRSIKELEDEMLNGQK 689
I F + FY G ++ TF+ESCGVADLITTCY GRNR E F+K+ +S ++E E+L GQK
Sbjct: 277 IDFANRFYEGVQIETFYESCGVADLITTCYAGRNRLAGEEFIKSKKSFDQVEQEILGGQK 336
Query: 690 LQGPITAEEVNHMLANKNM 746
LQGP TA EV +L N+
Sbjct: 337 LQGPHTAYEVYQVLKENNL 355
Score = 77.0 bits (181), Expect = 2e-14
Identities = 36/71 (50%), Positives = 44/71 (61%)
Frame = +1
Query: 295 TTIGCRDVMLAPLMRDIIQTDYFRXXXXXXXXXXXICGALKNIVAVGAGFVDGLGYGDNT 474
T GCR PL++ + T YF+ +CGALKN VA+GAG VD LG GDNT
Sbjct: 205 TVKGCRVKEDGPLLKQLFHTHYFKINVVEDADTVELCGALKNAVAIGAGIVDALGMGDNT 264
Query: 475 KAAVIRLGLME 507
KAA+IR+GL E
Sbjct: 265 KAAIIRIGLKE 275
Score = 48.8 bits (111), Expect = 5e-06
Identities = 37/100 (37%), Positives = 51/100 (51%)
Frame = +1
Query: 7 LPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIAEGG 186
+P N+ A PDVVE KDAD+L+FVVPHQ + T L+L+
Sbjct: 73 IPENIHANPDVVECVKDADILVFVVPHQ-----------GLDHTKTGLTLVS-------- 113
Query: 187 WHRSYITYYYKMPKNSLCCINGSNIASEVAEEKFCETTIG 306
+ I +P+ S+ + G+N+A EVA E F E TIG
Sbjct: 114 ---NVIKEALDLPEVSV--LMGANLAKEVARELFGEATIG 148
>SB_49139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 772
Score = 62.5 bits (145), Expect = 4e-10
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = +1
Query: 76 VVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIAEGGWHRSYITYYYKMPKNSLCCINGS 255
+ P+ F+ ++C + IKP A+SLIKG D + G H + + + G+
Sbjct: 294 IPPNVFLDSVCQKIKSSIKPDVLAISLIKGLDHRKKGLHLVSNQIKESLGLQHVSVMMGA 353
Query: 256 NIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDYFRXXXXXXXXXXXICGALK 417
N+A EVA+ F ETTIG R + ++++ YF+ CGA+K
Sbjct: 354 NLADEVAKGFFSETTIGSRLEEHGYIFKELLNQPYFKVNVVKDVETVEFCGAVK 407
>SB_39311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 916
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = +1
Query: 127 IKPTAAALSLIKGFDIAEGGWH------RSYITYYYKMPKNSLCC--INGSNIASEVAEE 282
I P A L FD+A G WH SY+T + + C G ++SE+ +
Sbjct: 39 ILPELANAKLFSKFDLAHGYWHCELDEESSYMTTFITVNGRFRWCRLPFGLKVSSEIFQR 98
Query: 283 KFCETTIGCRDVM 321
K E+ G R V+
Sbjct: 99 KLMESLSGLRGVV 111
>SB_13238| Best HMM Match : rve (HMM E-Value=1.1e-13)
Length = 637
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = +1
Query: 127 IKPTAAALSLIKGFDIAEGGWH------RSYITYYYKMPKNSLCC--INGSNIASEVAEE 282
I P A L FD+A G WH SY+T + + C G ++SE+ +
Sbjct: 83 ILPELANAKLFSKFDLAHGYWHCKLDEESSYMTTFITVNGRFRWCRLPFGLKVSSEIFQR 142
Query: 283 KFCETTIGCRDVM 321
K E+ G R V+
Sbjct: 143 KLMESLSGLRGVV 155
>SB_59573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = +1
Query: 127 IKPTAAALSLIKGFDIAEGGWH------RSYITYYYKMPKNSLCC--INGSNIASEVAEE 282
I P A L FD+A G WH SY+T + + C G ++SE+ +
Sbjct: 180 ILPELANAKLFSKFDLAHGYWHCELDEESSYMTTFITVNGRFRWCRLPFGLKVSSEIFQR 239
Query: 283 KFCETTIGCRDVM 321
K E+ G R V+
Sbjct: 240 KLMESLSGLRGVV 252
>SB_52945| Best HMM Match : RVT_1 (HMM E-Value=7.2e-19)
Length = 429
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = +1
Query: 127 IKPTAAALSLIKGFDIAEGGWH------RSYITYYYKMPKNSLCC--INGSNIASEVAEE 282
I P A L FD+A G WH SY+T + + C G ++SE+ +
Sbjct: 37 ILPELANAKLFSKFDLAHGYWHCELDEESSYMTTFITVNGRFRWCRLPFGLKVSSEIFQR 96
Query: 283 KFCETTIGCRDVM 321
K E+ G R V+
Sbjct: 97 KLMESLSGLRGVV 109
>SB_19376| Best HMM Match : RVT_1 (HMM E-Value=6.7e-16)
Length = 274
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = +1
Query: 127 IKPTAAALSLIKGFDIAEGGWH------RSYITYYYKMPKNSLCC--INGSNIASEVAEE 282
I P A L FD+A G WH SY+T + + C G ++SE+ +
Sbjct: 85 ILPELANAKLFSKFDLAHGYWHCKLDEESSYMTTFITVNGRFRWCRLPFGLKVSSEIFQR 144
Query: 283 KFCETTIGCRDVM 321
K E+ G R V+
Sbjct: 145 KLMESLSGLRGVV 157
>SB_52813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 484 QQPLCYHRSRGHPRNPHPLPQCSLTLH 404
Q PL YH + HP HPL Q +L H
Sbjct: 75 QHPLRYHPLKQHPLRYHPLRQRTLRYH 101
>SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29)
Length = 1167
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = +1
Query: 127 IKPTAAALSLIKGFDIAEGGWH------RSYITYYYKMPKNSLCC--INGSNIASEVAEE 282
I P A L FD+A G WH SY+T + + C G ++SE+ +
Sbjct: 498 ILPELANAKLFSKFDLAHGYWHCELDEESSYMTTFITVNGRFRWCRLPFGLKVSSEIFQC 557
Query: 283 KFCETTIGCRDVM 321
K E+ G R V+
Sbjct: 558 KLMESLSGLRGVV 570
>SB_34159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 480 SLCVITVAEAIHETRTHCHNVL 415
++C+I V +H+T+ H HN L
Sbjct: 793 AICIIMVWTELHQTKAHPHNAL 814
>SB_16288| Best HMM Match : Dabb (HMM E-Value=3)
Length = 264
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 70 IFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIAEGGWHRSYITY-YYK 219
+ VV V ++CSTL ++ +SL+ D++ GG R Y YYK
Sbjct: 107 VMVVFASLVTSVCSTLTRTALKSSGTVSLVFTGDVSFGGAVRYYAEKGYYK 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,781,514
Number of Sequences: 59808
Number of extensions: 494630
Number of successful extensions: 1204
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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