BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0010 (773 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical pr... 165 2e-41 Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical p... 157 1e-38 Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 157 1e-38 Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical pr... 132 2e-31 Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical pr... 127 8e-30 >Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical protein K11H3.1a protein. Length = 371 Score = 165 bits (402), Expect = 2e-41 Identities = 84/168 (50%), Positives = 109/168 (64%), Gaps = 1/168 (0%) Frame = +1 Query: 7 LPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIAEGG 186 LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIKG + G Sbjct: 90 LPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIKGVSTEKRG 149 Query: 187 WHRSYITYYYKMPKNSLCCINGSNIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQTDYF 363 + ++ K + + G+N+A EVA + FCE TIGC R PL++ + TD F Sbjct: 150 GLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNF 209 Query: 364 RXXXXXXXXXXXICGALKNIVAVGAGFVDGLGYGDNTKAAVIRLGLME 507 R +CGALKN+VA AGF DGLGYGDNTKAAVIRLGLME Sbjct: 210 RINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTKAAVIRLGLME 257 Score = 127 bits (307), Expect = 8e-30 Identities = 56/83 (67%), Positives = 68/83 (81%) Frame = +3 Query: 513 KFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVAEAFVKTGRSIKELEDEMLNGQKL 692 KFV+ +YPGS L TFFESCG+ADLITTCYGGRNR+V EAFVKTG+S+ E+E E+LNGQ Sbjct: 260 KFVEHYYPGSNLQTFFESCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSA 319 Query: 693 QGPITAEEVNHMLANKNMENKFP 761 QGP+TAEEV M+ ++ KFP Sbjct: 320 QGPLTAEEVYLMMHKTGLDAKFP 342 >Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical protein K11H3.1d protein. Length = 360 Score = 157 bits (380), Expect = 1e-38 Identities = 88/177 (49%), Positives = 111/177 (62%), Gaps = 10/177 (5%) Frame = +1 Query: 7 LPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKG--FDIAE 180 LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIKG FD Sbjct: 70 LPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIKGISFDKTN 129 Query: 181 GGWHRS------YITYYYK-MPKNSLCCINGSNIASEVAEEKFCETTIGC-RDVMLAPLM 336 G I+ K + K + + G+N+A EVA + FCE TIGC R PL+ Sbjct: 130 QGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLL 189 Query: 337 RDIIQTDYFRXXXXXXXXXXXICGALKNIVAVGAGFVDGLGYGDNTKAAVIRLGLME 507 + + TD FR +CGALKN+VA AGF DGLGYGDNTKAAVIRLGLME Sbjct: 190 KKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTKAAVIRLGLME 246 Score = 127 bits (307), Expect = 8e-30 Identities = 56/83 (67%), Positives = 68/83 (81%) Frame = +3 Query: 513 KFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVAEAFVKTGRSIKELEDEMLNGQKL 692 KFV+ +YPGS L TFFESCG+ADLITTCYGGRNR+V EAFVKTG+S+ E+E E+LNGQ Sbjct: 249 KFVEHYYPGSNLQTFFESCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSA 308 Query: 693 QGPITAEEVNHMLANKNMENKFP 761 QGP+TAEEV M+ ++ KFP Sbjct: 309 QGPLTAEEVYLMMHKTGLDAKFP 331 >Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical protein K11H3.1b protein. Length = 392 Score = 157 bits (380), Expect = 1e-38 Identities = 88/177 (49%), Positives = 111/177 (62%), Gaps = 10/177 (5%) Frame = +1 Query: 7 LPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKG--FDIAE 180 LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIKG FD Sbjct: 102 LPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIKGISFDKTN 161 Query: 181 GGWHRS------YITYYYK-MPKNSLCCINGSNIASEVAEEKFCETTIGC-RDVMLAPLM 336 G I+ K + K + + G+N+A EVA + FCE TIGC R PL+ Sbjct: 162 QGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLL 221 Query: 337 RDIIQTDYFRXXXXXXXXXXXICGALKNIVAVGAGFVDGLGYGDNTKAAVIRLGLME 507 + + TD FR +CGALKN+VA AGF DGLGYGDNTKAAVIRLGLME Sbjct: 222 KKLFHTDNFRINVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTKAAVIRLGLME 278 Score = 127 bits (307), Expect = 8e-30 Identities = 56/83 (67%), Positives = 68/83 (81%) Frame = +3 Query: 513 KFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVAEAFVKTGRSIKELEDEMLNGQKL 692 KFV+ +YPGS L TFFESCG+ADLITTCYGGRNR+V EAFVKTG+S+ E+E E+LNGQ Sbjct: 281 KFVEHYYPGSNLQTFFESCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSA 340 Query: 693 QGPITAEEVNHMLANKNMENKFP 761 QGP+TAEEV M+ ++ KFP Sbjct: 341 QGPLTAEEVYLMMHKTGLDAKFP 363 >Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical protein F47G4.3 protein. Length = 374 Score = 132 bits (320), Expect = 2e-31 Identities = 71/171 (41%), Positives = 98/171 (57%), Gaps = 3/171 (1%) Frame = +1 Query: 4 KLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIA-- 177 ++P NVVA ++EA + A +LI VVPHQ + IC L GK++ A A+SL KG + Sbjct: 90 RIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAISLTKGISSSCE 149 Query: 178 EGGWHRSYITYYYKMPKNSLCCI-NGSNIASEVAEEKFCETTIGCRDVMLAPLMRDIIQT 354 G I+ + C + G+N+A EVA+ KFCE TIGC+ + ++ + T Sbjct: 150 NGEIKMQLISEDIERALGVQCSVLMGANLAGEVADGKFCEATIGCKSLKNGEELKKVFDT 209 Query: 355 DYFRXXXXXXXXXXXICGALKNIVAVGAGFVDGLGYGDNTKAAVIRLGLME 507 FR +CGALKNIVA AGF DGLG+ N K+A+IRLGL+E Sbjct: 210 PNFRIRVTTDYEAVELCGALKNIVACAAGFADGLGWAYNVKSAIIRLGLLE 260 Score = 109 bits (263), Expect = 2e-24 Identities = 49/83 (59%), Positives = 62/83 (74%) Frame = +3 Query: 513 KFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVAEAFVKTGRSIKELEDEMLNGQKL 692 KFV+ FYP S T+FESCGVADLITTCYGGRNR+VAEAF+K+ + ++ +E E+L GQ Sbjct: 263 KFVEHFYPSSVGHTYFESCGVADLITTCYGGRNRKVAEAFIKSDKPLRVIEQELLKGQSA 322 Query: 693 QGPITAEEVNHMLANKNMENKFP 761 QGP TA++V ML + KFP Sbjct: 323 QGPPTAQDVYEMLEINEISEKFP 345 >Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical protein K11H3.1c protein. Length = 304 Score = 127 bits (307), Expect = 8e-30 Identities = 56/83 (67%), Positives = 68/83 (81%) Frame = +3 Query: 513 KFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVAEAFVKTGRSIKELEDEMLNGQKL 692 KFV+ +YPGS L TFFESCG+ADLITTCYGGRNR+V EAFVKTG+S+ E+E E+LNGQ Sbjct: 193 KFVEHYYPGSNLQTFFESCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSA 252 Query: 693 QGPITAEEVNHMLANKNMENKFP 761 QGP+TAEEV M+ ++ KFP Sbjct: 253 QGPLTAEEVYLMMHKTGLDAKFP 275 Score = 106 bits (254), Expect = 2e-23 Identities = 52/95 (54%), Positives = 62/95 (65%), Gaps = 1/95 (1%) Frame = +1 Query: 226 KNSLCCINGSNIASEVAEEKFCETTIGC-RDVMLAPLMRDIIQTDYFRXXXXXXXXXXXI 402 K + + G+N+A EVA + FCE TIGC R PL++ + TD FR + Sbjct: 96 KIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNFRINVVEDAHTVEL 155 Query: 403 CGALKNIVAVGAGFVDGLGYGDNTKAAVIRLGLME 507 CGALKN+VA AGF DGLGYGDNTKAAVIRLGLME Sbjct: 156 CGALKNVVACAAGFTDGLGYGDNTKAAVIRLGLME 190 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,583,266 Number of Sequences: 27780 Number of extensions: 370574 Number of successful extensions: 875 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 833 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 864 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1861650246 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -