Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0010
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...   214   7e-58
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.6  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.6  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   9.6  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score =  214 bits (523), Expect = 7e-58
 Identities = 101/169 (59%), Positives = 123/169 (72%)
 Frame = +1

Query: 1   HKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIAE 180
           HKLP N++A+PDVVEAAKDAD+L FVVPHQF++ ICS L GKIKPTA  LSLIKGFD  +
Sbjct: 68  HKLPPNIIAIPDVVEAAKDADILTFVVPHQFIKRICSALFGKIKPTAIGLSLIKGFDKKQ 127

Query: 181 GGWHRSYITYYYKMPKNSLCCINGSNIASEVAEEKFCETTIGCRDVMLAPLMRDIIQTDY 360
           GG          K     +  + G+N+ASEVA E FCETTIGC+D  +AP+++D+++T Y
Sbjct: 128 GGGIELISHIISKQLHIPVSVLMGANLASEVANEMFCETTIGCKDKNMAPILKDLMETSY 187

Query: 361 FRXXXXXXXXXXXICGALKNIVAVGAGFVDGLGYGDNTKAAVIRLGLME 507
           F+            CGALKNIVA GAGF+DGLG GDNTKAAV+RLGLME
Sbjct: 188 FKVVVVEDVDSVECCGALKNIVACGAGFIDGLGLGDNTKAAVMRLGLME 236



 Score =  147 bits (357), Expect = 9e-38
 Identities = 65/84 (77%), Positives = 74/84 (88%)
 Frame = +3

Query: 510 IKFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVAEAFVKTGRSIKELEDEMLNGQK 689
           IKFV++F+PG K +TFFESCGVADLI TCYGGRNR++ EAFVKTG+ I ELE EMLNGQK
Sbjct: 238 IKFVNIFFPGGKKTTFFESCGVADLIATCYGGRNRKICEAFVKTGKKISELEKEMLNGQK 297

Query: 690 LQGPITAEEVNHMLANKNMENKFP 761
           LQGP TAEEVN+ML  KNMEN+FP
Sbjct: 298 LQGPFTAEEVNYMLKAKNMENRFP 321


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300  HWLSGRNAGSVNAGY 344
            HW SG N G+   GY
Sbjct: 1423 HWKSGHNGGASLTGY 1437


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 300  HWLSGRNAGSVNAGY 344
            HW SG N G+   GY
Sbjct: 1419 HWKSGHNGGASLTGY 1433


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 684 QKLQGPITAEEVNHMLAN 737
           ++L  P+T   + H+LAN
Sbjct: 8   EELLSPLTLNRITHILAN 25


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 684 QKLQGPITAEEVNHMLAN 737
           ++L  P+T   + H+LAN
Sbjct: 46  EELLSPLTLNRITHILAN 63


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 518  EFDLSMRPSLMTAAFVLS 465
            E D  +RP L TAA +L+
Sbjct: 1173 ELDRELRPYLRTAAAILT 1190


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 534 PGSKLSTFFESCGVADLITTCYG 602
           P  K + F  S G+A ++TT  G
Sbjct: 205 PDPKKTPFLISWGIAQVVTTVAG 227


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 633 QTLRQLVCFCPRSRSLLNLR 574
           +T+ Q  CFC R+  ++ L+
Sbjct: 478 ETILQNACFCARNELMMILK 497


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 534 PGSKLSTFFESCGVADLITTCYG 602
           P  K + F  S G+A ++TT  G
Sbjct: 205 PDPKKTPFLISWGIAQVVTTVAG 227


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 5/12 (41%), Positives = 6/12 (50%)
 Frame = +2

Query: 353 QTTSGSWWWTMR 388
           Q     WWW M+
Sbjct: 360 QNEMNKWWWNMK 371


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 546 LSTFFESCGVADLITTCYG 602
           +STFF+  G   + T C G
Sbjct: 136 VSTFFDQLGQEVIYTACVG 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,672
Number of Sequences: 438
Number of extensions: 4221
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)