Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0008
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.6  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 492 VCLLGQNIKLVHLDKSAKCRINFNYTNKKTFTQK 593
           +CL    +  V+   S KC + F++ +KK F  K
Sbjct: 202 LCLTTFGLLPVNGVTSEKCNLTFSWYSKKVFYSK 235


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +3

Query: 444 DVS*STVPTLRQAGVLVCLL 503
           D++ +TVP+ +Q G+LV ++
Sbjct: 367 DINITTVPSEQQWGILVLII 386


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 486  VLVCLLGQNIKLVHLDKSAKCRINFNYTNKK 578
            +++ LL     L+HLD     ++NF Y   K
Sbjct: 1238 IVIFLLTLKKDLLHLDWPFDPKVNFTYFEDK 1268


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 486  VLVCLLGQNIKLVHLDKSAKCRINFNYTNKK 578
            +++ LL     L+HLD     ++NF Y   K
Sbjct: 1238 IVIFLLTLKKDLLHLDWPFDPKVNFTYFEDK 1268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,986
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)