BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0008
(805 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46752-1|AAC50535.1| 420|Homo sapiens phosphotyrosine independe... 50 1e-05
U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independe... 50 1e-05
U41806-1|AAA93299.1| 440|Homo sapiens p60 protein. 50 1e-05
BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein. 50 1e-05
BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein. 50 1e-05
BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein. 50 1e-05
BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein. 50 1e-05
BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome... 50 1e-05
>U46752-1|AAC50535.1| 420|Homo sapiens phosphotyrosine independent
ligand p62B for the Lck SH2 domain B-cell isoform
protein.
Length = 420
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 5 AKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
A P + E+L QML+MGF+++GGWL LL+ K+ +I A LD +
Sbjct: 370 ADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTI 411
>U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independent
ligand for the Lck SH2 domain p62 protein.
Length = 440
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 5 AKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
A P + E+L QML+MGF+++GGWL LL+ K+ +I A LD +
Sbjct: 390 ADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTI 431
>U41806-1|AAA93299.1| 440|Homo sapiens p60 protein.
Length = 440
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 5 AKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
A P + E+L QML+MGF+++GGWL LL+ K+ +I A LD +
Sbjct: 390 ADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTI 431
>BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 5 AKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
A P + E+L QML+MGF+++GGWL LL+ K+ +I A LD +
Sbjct: 390 ADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTI 431
>BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 5 AKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
A P + E+L QML+MGF+++GGWL LL+ K+ +I A LD +
Sbjct: 390 ADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTI 431
>BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 5 AKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
A P + E+L QML+MGF+++GGWL LL+ K+ +I A LD +
Sbjct: 390 ADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTI 431
>BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein.
Length = 356
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 5 AKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
A P + E+L QML+MGF+++GGWL LL+ K+ +I A LD +
Sbjct: 306 ADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTI 347
>BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome 1
protein.
Length = 368
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 5 AKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
A P + E+L QML+MGF+++GGWL LL+ K+ +I A LD +
Sbjct: 318 ADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTI 359
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,855,735
Number of Sequences: 237096
Number of extensions: 1639607
Number of successful extensions: 2286
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2286
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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