Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0008
         (805 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69830-1|CAA49484.1|  590|Drosophila melanogaster ref(2)Pn prote...    52   1e-06
X69828-1|CAA49482.1|  583|Drosophila melanogaster Ref(2) Pp prot...    52   1e-06
X16993-1|CAA34861.1|  599|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23933-1|AAA98841.1|  591|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23932-1|AAA98840.1|  599|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23931-1|AAA98839.1|  599|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23929-1|AAA98838.1|  599|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23928-1|AAA98837.1|  599|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23927-1|AAA98836.1|  591|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23926-1|AAA98835.1|  591|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23925-1|AAA98834.1|  590|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23924-1|AAA98833.1|  599|Drosophila melanogaster Ref(2)P protei...    52   1e-06
U23923-1|AAA98832.1|  591|Drosophila melanogaster Ref(2)P protei...    52   1e-06
AY089494-1|AAL90232.1|  599|Drosophila melanogaster GH06306p pro...    52   1e-06
AE014134-3129|AAX52671.1|  599|Drosophila melanogaster CG10360-P...    52   1e-06
AE014134-3128|AAF53824.1|  599|Drosophila melanogaster CG10360-P...    52   1e-06
X69829-1|CAA49483.1|  599|Drosophila melanogaster ref(2)Po2 prot...    51   2e-06

>X69830-1|CAA49484.1|  590|Drosophila melanogaster ref(2)Pn protein
           protein.
          Length = 590

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 541 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 583


>X69828-1|CAA49482.1|  583|Drosophila melanogaster Ref(2) Pp protein
           protein.
          Length = 583

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 534 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 576


>X16993-1|CAA34861.1|  599|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>U23933-1|AAA98841.1|  591|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 591

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 542 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 584


>U23932-1|AAA98840.1|  599|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>U23931-1|AAA98839.1|  599|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>U23929-1|AAA98838.1|  599|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>U23928-1|AAA98837.1|  599|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>U23927-1|AAA98836.1|  591|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 591

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 542 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 584


>U23926-1|AAA98835.1|  591|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 591

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 542 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 584


>U23925-1|AAA98834.1|  590|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 590

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 541 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 583


>U23924-1|AAA98833.1|  599|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>U23923-1|AAA98832.1|  591|Drosophila melanogaster Ref(2)P protein
           protein.
          Length = 591

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 542 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 584


>AY089494-1|AAL90232.1|  599|Drosophila melanogaster GH06306p
           protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>AE014134-3129|AAX52671.1|  599|Drosophila melanogaster CG10360-PB,
           isoform B protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>AE014134-3128|AAF53824.1|  599|Drosophila melanogaster CG10360-PA,
           isoform A protein.
          Length = 599

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLTQLLESVQGNISAALDVM 592


>X69829-1|CAA49483.1|  599|Drosophila melanogaster ref(2)Po2 protein
           protein.
          Length = 599

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 2   HAKPHIDEALRQMLAMGFTNQGGWLVELLEKKDGNIAAVLDLL 130
           H    I++++  M+AMGF+N+G WL +LLE   GNI+A LD++
Sbjct: 550 HTDESINKSIHAMMAMGFSNEGAWLSQLLESVQGNISAALDVM 592


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,559,099
Number of Sequences: 53049
Number of extensions: 523803
Number of successful extensions: 1208
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)