Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0007
         (827 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.0  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   9.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 387  YYFQNVSSLETRLRKNHVFWCLDWC 313
            YY  N   L+ ++  N +FW  D C
Sbjct: 2252 YYLCNQGQLQLQVCPNGLFWNKDHC 2276


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 282 PSRSDDIGTQYTNPNTKRHGF 344
           P   DD      NP  K+H F
Sbjct: 218 PEEDDDSNIPQNNPKNKQHNF 238


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 712 CTSHPCRQNDVCGVS 668
           C S+PC+   VC +S
Sbjct: 380 CDSNPCQNGGVCRIS 394



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 724 ELSSCTSHPCRQNDVC 677
           E++ C S PC+    C
Sbjct: 184 EINECDSAPCQNGGTC 199


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 254 KNGCSKDHLPESERRYRNSIHQSKHQKTWF 343
           KNGC K    + E  ++   H   H+  W+
Sbjct: 67  KNGCVKCEQKQKEDVHKVFQHLMIHRPNWW 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,120
Number of Sequences: 336
Number of extensions: 4174
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)