Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0007
         (827 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.0  
EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.     23   8.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.7  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 17/75 (22%), Positives = 28/75 (37%)
 Frame = -2

Query: 574  WKNSEFEP*SIVLAYNCSGFKYPRKSWXXXXXXXXXXXXXLGESLRLDRSPVGSFLALND 395
            WK  + E    +L  +C GF Y R  +              G+S  +D      F ++  
Sbjct: 1721 WKTGQMEGTVTLLNSDCEGFPYSRTVYMDNPLEDKSIQSLPGKSFAIDGRFAQHFSSIQG 1780

Query: 394  LGLLLSKCFES*DSF 350
            +   L+  F + D F
Sbjct: 1781 ID-FLTNLFPTQDGF 1794


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 17/75 (22%), Positives = 28/75 (37%)
 Frame = -2

Query: 574  WKNSEFEP*SIVLAYNCSGFKYPRKSWXXXXXXXXXXXXXLGESLRLDRSPVGSFLALND 395
            WK  + E    +L  +C GF Y R  +              G+S  +D      F ++  
Sbjct: 1720 WKTGQMEGTVTLLNSDCEGFPYSRTVYMDNPLEDKSIQSLPGKSFAIDGPFAQHFNSIQG 1779

Query: 394  LGLLLSKCFES*DSF 350
            +   L+  F + D F
Sbjct: 1780 ID-FLTNLFPTQDGF 1793


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 824 LESALSHY*ERTHRKPERSCPGGV 753
           L  A SHY +R+ R P   C  G+
Sbjct: 855 LSPASSHYSQRSARSPYGGCGSGI 878


>EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -1

Query: 365 VLRLVCEKTMSFGVWIGVLSSDIVAPTR 282
           +L L+C++ + F + +  L+ + + PTR
Sbjct: 112 LLDLICKECLPFNLVVYTLNPNYIMPTR 139


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 510  YLKPEQLYASTMLHGSNSEFFQELDQL 590
            Y++PEQL+   + +GS+ E +  L  L
Sbjct: 1525 YVEPEQLFELLVRNGSSGERWLRLHDL 1551


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,409
Number of Sequences: 2352
Number of extensions: 17702
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)