Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0006
(821 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 163 2e-40
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 6e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 160 1e-39
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 135 5e-32
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 95 8e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 6e-16
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 79 4e-15
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 60 2e-09
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.5
SB_58359| Best HMM Match : DUF554 (HMM E-Value=5) 31 1.5
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.6
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 3.4
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 3.4
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.4
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 3.4
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.4
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.6
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.6
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_52215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 8.0
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 8.0
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 163 bits (396), Expect = 2e-40
Identities = 74/104 (71%), Positives = 84/104 (80%)
Frame = +2
Query: 2 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLI 181
YSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLI
Sbjct: 15 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLI 74
Query: 182 GRKFEDATVQADMKHWPFEVVSDGANLRSR*HIRVKTKPFSPRK 313
GRKF+D V DM HWPF V+ +G + + + + K F P +
Sbjct: 75 GRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEE 118
Score = 157 bits (380), Expect = 1e-38
Identities = 71/87 (81%), Positives = 81/87 (93%)
Frame = +3
Query: 510 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 689
LDKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++
Sbjct: 185 LDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQ 244
Query: 690 FKRKYKKDLATNKRALRRLRTACERQR 770
FK+KYKKD+ NKRA+RRLRTACER +
Sbjct: 245 FKQKYKKDITPNKRAMRRLRTACERAK 271
Score = 152 bits (369), Expect = 3e-37
Identities = 73/90 (81%), Positives = 83/90 (92%)
Frame = +1
Query: 256 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 435
+PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATK
Sbjct: 100 RPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK 159
Query: 436 DAGTISGLNVLRIINEPTAAAIAYVLTKRV 525
DAGTI+GLNVLRIINEPTAAAIAY L K+V
Sbjct: 160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKV 189
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 764 AKRTLSSSTQASIEIDSLF 820
AKRTLSSSTQASIEIDSLF
Sbjct: 270 AKRTLSSSTQASIEIDSLF 288
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 161 bits (391), Expect = 6e-40
Identities = 74/100 (74%), Positives = 84/100 (84%)
Frame = +2
Query: 2 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLI 181
YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLI
Sbjct: 15 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLI 74
Query: 182 GRKFEDATVQADMKHWPFEVVSDGANLRSR*HIRVKTKPF 301
GR+F+D V+ DMKHW FEVV++ + + + +TK F
Sbjct: 75 GRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTF 114
Score = 151 bits (365), Expect = 9e-37
Identities = 70/87 (80%), Positives = 78/87 (89%)
Frame = +3
Query: 510 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 689
LDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++
Sbjct: 278 LDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQ 337
Query: 690 FKRKYKKDLATNKRALRRLRTACERQR 770
FK+KYKKD+ NKRALRRLRTACER +
Sbjct: 338 FKQKYKKDITPNKRALRRLRTACERAK 364
Score = 121 bits (292), Expect = 6e-28
Identities = 60/72 (83%), Positives = 65/72 (90%)
Frame = +1
Query: 310 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 489
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 490 AAAIAYVLTKRV 525
AAAIAY L K+V
Sbjct: 271 AAAIAYGLDKKV 282
Score = 109 bits (262), Expect = 3e-24
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +1
Query: 256 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 435
+PK+KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATK
Sbjct: 125 RPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
Query: 436 DAG 444
DAG
Sbjct: 185 DAG 187
Score = 37.5 bits (83), Expect = 0.013
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 764 AKRTLSSSTQASIEIDSLF 820
AKRTLSSSTQASIEIDSL+
Sbjct: 363 AKRTLSSSTQASIEIDSLY 381
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 160 bits (389), Expect = 1e-39
Identities = 72/101 (71%), Positives = 87/101 (86%)
Frame = +2
Query: 2 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLI 181
YSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA+NP NTIFDAKRLI
Sbjct: 15 YSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALNPENTIFDAKRLI 74
Query: 182 GRKFEDATVQADMKHWPFEVVSDGANLRSR*HIRVKTKPFS 304
GR+++DATVQ+DMK WPF+++SD + + + + K F+
Sbjct: 75 GRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFA 115
Score = 155 bits (377), Expect = 3e-38
Identities = 72/88 (81%), Positives = 81/88 (92%), Gaps = 1/88 (1%)
Frame = +3
Query: 510 LDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQ 686
LDK +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV
Sbjct: 185 LDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVA 244
Query: 687 EFKRKYKKDLATNKRALRRLRTACERQR 770
EFKRKYKKD++ N RA+RRLRTACER +
Sbjct: 245 EFKRKYKKDMSKNSRAMRRLRTACERAK 272
Score = 147 bits (356), Expect = 1e-35
Identities = 72/89 (80%), Positives = 80/89 (89%)
Frame = +1
Query: 253 SKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAT 432
+KPKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQAT
Sbjct: 99 NKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQAT 158
Query: 433 KDAGTISGLNVLRIINEPTAAAIAYVLTK 519
KDAGTI+GLNVLR+INEPTAAA+AY L K
Sbjct: 159 KDAGTIAGLNVLRVINEPTAAALAYGLDK 187
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +2
Query: 764 AKRTLSSSTQASIEIDSLF 820
AKRTLSSST+ASIE+DSLF
Sbjct: 271 AKRTLSSSTEASIEVDSLF 289
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 135 bits (326), Expect = 5e-32
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = +1
Query: 256 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 435
KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATK
Sbjct: 798 KPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Query: 436 DAGTISGLNVLRIINEPTAAAIAYVLTKR 522
DAG I+GL V+RIINEPTAAAIAY + K+
Sbjct: 858 DAGAIAGLTVMRIINEPTAAAIAYGMDKK 886
Score = 131 bits (316), Expect = 8e-31
Identities = 63/99 (63%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 YSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRL 178
YSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP NT+FDAKRL
Sbjct: 712 YSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRL 771
Query: 179 IGRKFEDATVQADMKHWPFEVVSDGANLRSR*HIRVKTK 295
IGR ++D +VQ D+K +PF+VV + + H++VK K
Sbjct: 772 IGRSWDDTSVQNDLKFFPFKVV----DKNKKPHVQVKVK 806
Score = 111 bits (266), Expect = 9e-25
Identities = 48/95 (50%), Positives = 72/95 (75%)
Frame = +3
Query: 510 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 689
+DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++
Sbjct: 883 MDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKL 941
Query: 690 FKRKYKKDLATNKRALRRLRTACERQRGPCHRPHK 794
+K+K K++ + RA+++LR E+ + H+
Sbjct: 942 YKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQ 976
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 96.3 bits (229), Expect = 3e-20
Identities = 41/77 (53%), Positives = 59/77 (76%)
Frame = +3
Query: 540 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 719
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 720 TNKRALRRLRTACERQR 770
+ AL+RLR A E+ +
Sbjct: 62 KDSMALQRLREAAEKAK 78
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 94.7 bits (225), Expect = 8e-20
Identities = 57/109 (52%), Positives = 72/109 (66%), Gaps = 24/109 (22%)
Frame = +1
Query: 265 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 444
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 445 TISGLN------------------------VLRIINEPTAAAIAYVLTK 519
TI+GL+ VLRIINEPTAAAIAY L K
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDK 110
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 81.8 bits (193), Expect = 6e-16
Identities = 38/91 (41%), Positives = 60/91 (65%)
Frame = +1
Query: 265 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 444
I+V Y G+ + F PE+V +M+ T++K TAE L V + VI+VP+Y+ D QR+ DA
Sbjct: 160 IQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDAS 219
Query: 445 TISGLNVLRIINEPTAAAIAYVLTKRVLENE 537
+GLN LR++N+ TA ++AY + K+ L +
Sbjct: 220 ATAGLNCLRLMNDTTAVSLAYGIYKQDLPTD 250
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = +3
Query: 534 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 713
RNV+ D+G + V I G +V STA + +LGG DFD +V HF QEFK KYK D
Sbjct: 253 RNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKID 312
Query: 714 LATNKRALRRLRTACER 764
+ ++ +A +L CE+
Sbjct: 313 VHSSIKAKIKLGAECEK 329
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 5 SC-VGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 133
SC + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 12 SCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 143 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 244
N NTI KR IGRKF D VQ ++ H P++VV
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVV 151
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 79.0 bits (186), Expect = 4e-15
Identities = 40/84 (47%), Positives = 54/84 (64%)
Frame = +1
Query: 271 VAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTI 450
V KG PEE+ V+ K++ AE L TV AV++VPA F+ QR AT A ++
Sbjct: 135 VGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASL 194
Query: 451 SGLNVLRIINEPTAAAIAYVLTKR 522
+G+ VLR+INEPTAAA+AY L K+
Sbjct: 195 AGITVLRVINEPTAAALAYGLHKK 218
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 YSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKR 175
YSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q +NP NTI+DAKR
Sbjct: 42 YSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINPKNTIYDAKR 101
Query: 176 LIGRKFEDATVQADMKHWPFEVVSD 250
IG+ F + K + F V +D
Sbjct: 102 FIGKTFTKQELLEIGKLYQFRVTTD 126
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +3
Query: 519 KGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR 698
K G NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +
Sbjct: 217 KKEGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHK 276
Query: 699 KYKKDLATNKRALRRLRTACE 761
++ + L T ++RLR E
Sbjct: 277 RFNRQL-TCSEDIQRLRQEVE 296
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Frame = +1
Query: 259 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 438
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 439 AGTISGLNVLRIINEPTAAAIAYVLTKRVLENE 537
A + GLNVL+I+N TA A+ Y L ++ N+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFND 159
Score = 33.1 bits (72), Expect = 0.28
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Frame = +3
Query: 525 TGERNVLIFDLGGGTFDVSIL------TIEDGIFE------VKSTAGDTHLGGEDFDNRM 668
T E++ + +D+G + +I+ T + GI E +K D LGG D R+
Sbjct: 160 TLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIKGIGFDRTLGGHAIDMRL 219
Query: 669 VNHFVQEFKR--KYKKDLATNKRALRR 743
+H VQ FK+ K+K ++ + RA+ +
Sbjct: 220 RDHLVQLFKKNYKFKGEVTQSSRAMAK 246
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 60.5 bits (140), Expect = 2e-09
Identities = 30/83 (36%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Frame = +3
Query: 531 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 698
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 699 -KYKKDLATNKRALRRLRTACER 764
K+K D TNKR+ +L+T+ E+
Sbjct: 213 WKWKIDPLTNKRSKTKLQTSAEQ 235
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 29 GKVEIIANDQGNRTTPSYVAFTDTERLI 112
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 504 LRLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 656
L L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1510 LSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 537 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 656
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 29 GKVEIIA-NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDAT 205
G+ EI+A ++ G + P+ E L+ A A P++ +FD K E
Sbjct: 2770 GEEEIVAMSEDGVESEPTQRVSQVFEDLVSFGA---AAPQPHDFVFDLKGYNVEDLETTV 2826
Query: 206 VQADMKHWPFEVVSDGAN 259
+ D + P E+V G N
Sbjct: 2827 ISPDGEVLPAEIVESGTN 2844
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 38 EIIANDQGNRTTPSYVAFT-DTERL 109
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 540 VLIFDLGGGTFDVSILTIEDGIFEVK 617
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_58359| Best HMM Match : DUF554 (HMM E-Value=5)
Length = 429
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/77 (31%), Positives = 32/77 (41%)
Frame = +1
Query: 448 ISGLNVLRIINEPTAAAIAYVLTKRVLENEMYLSLTSAAVPSTCPSLPSRMVSSR*NPPP 627
I GL+ + P A IA LT+R + L + P CP S + S N P
Sbjct: 22 IIGLSAELPVTAPEALDIADRLTRRAASLKSGTHLKAQWNPVNCPYKLSGLYGSN-NKPR 80
Query: 628 ATPTWEVRTLTIAWSTT 678
T RT + +STT
Sbjct: 81 TRTTTHYRTTLVTFSTT 97
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 668 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 757
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 546 IFDLGGGTFDVSILTIEDGIFEV 614
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 550 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 693
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 46 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 216
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 637 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 521
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 619 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 735
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 146 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 48
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 164 RILCCWGSSPPGSWRH 117
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 164 RILCCWGSSPPGSWRH 117
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 553 TSAAVPSTCPSLPSRMVSSR*NPPPATP 636
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 677 LCPGVQEEIQKGPRYQQESS*AFAYCM*EAK 769
LCP ++ + GP +++E AFA C+ K
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_52215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 742
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 658 TIAWSTTLSRSSRGNTKRTSLPTRELLGVCVLHVRGKEDL 777
+I S T SR ++ +++P +ELLG C+L + KED+
Sbjct: 138 SIQHSNTKSRKPGKSSDLSAVPKQELLGTCLL-LEEKEDV 176
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 677 LCPGVQEEIQKGPRYQQESS*AFAYCM 757
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 677 LCPGVQEEIQKGPRYQQESS*AFAYCM 757
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,033,103
Number of Sequences: 59808
Number of extensions: 625716
Number of successful extensions: 2168
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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