Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0005
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   1.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.5  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   6.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.9  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 193 CQLCKAFIVDTTSLLYNYREHPGK 264
           C+LCK    D+++L  + R H G+
Sbjct: 80  CRLCKKAFSDSSTLTKHLRIHSGE 103


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 193 CQLCKAFIVDTTSLLYNYREHPGK 264
           C+LCK    D+++L  + R H G+
Sbjct: 336 CRLCKKAFSDSSTLTKHLRIHSGE 359


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 538 SSHEDSKSEYSGSYLKTL 485
           S H+DS++  SG +L+ L
Sbjct: 154 SGHQDSRTSPSGQHLQEL 171


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 538 SSHEDSKSEYSGSYLKTL 485
           S H+DS++  SG +L+ L
Sbjct: 154 SGHQDSRTSPSGQHLQEL 171


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 538 SSHEDSKSEYSGSYLKTL 485
           S H+DS++  SG +L+ L
Sbjct: 154 SGHQDSRTSPSGQHLQEL 171


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 441 LPPSGHILEIQTYAN 485
           +PP G ILE++  AN
Sbjct: 65  IPPLGEILELERDAN 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,291
Number of Sequences: 336
Number of extensions: 3087
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)