Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0003
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.66 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.1  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIP 375
           LWD    E   RL   +  +  VIL   ++   + LEN+P
Sbjct: 398 LWDMFQNESLTRLYKKAGKEIPVILWTSTLTQKEYLENLP 437


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 586 YTFLAFGRAFQICKRVNLFSHSPAFCV 506
           +  L F   F+ C R+N  S  P+F +
Sbjct: 397 FILLRFLSVFESCTRLNNESRKPSFVI 423


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 177 N*SLLNTISRHVLPHAPSPTIT 112
           N S  ++ SRH + H P P +T
Sbjct: 149 NYSAYSSASRHHVDHQPVPYLT 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,076
Number of Sequences: 336
Number of extensions: 4206
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)