Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0003
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 138 6e-34
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 134 1e-32
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 123 3e-29
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 121 1e-28
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 117 2e-27
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 97 3e-21
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 52 9e-08
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 50 3e-07
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 49 6e-07
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 48 1e-06
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 47 3e-06
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 46 8e-06
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 44 3e-05
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 44 3e-05
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 41 2e-04
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 40 5e-04
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 36 0.008
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 1.3
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 28 1.3
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 2.9
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 26 5.1
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.1
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 26 6.7
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 25 8.9
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 25 8.9
SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase ... 25 8.9
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 138 bits (335), Expect = 6e-34
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
LWDTAGQEDYDRLRPLSYPD+ V+L+CFSVD+P+SL+N+ EKW EV HFC N+PI+LVG
Sbjct: 58 LWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVG 117
Query: 436 NKKDLRNDPATINELRKMKQEPV 504
K DLRNDP TI EL K Q+P+
Sbjct: 118 CKVDLRNDPKTIEELSKTSQKPI 140
Score = 100 bits (240), Expect = 2e-22
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +2
Query: 98 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
+R+KLVIVGDGACGKTCLLIVFSK FPEVYVPTVFENYVAD+EVDG+ +EL
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIEL 56
Score = 57.2 bits (132), Expect = 2e-09
Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-------QVKKKKKTRCSLL 661
EG+ +A+KI A+ YLECSAK EGV EVFETA RA++ K KKK C LL
Sbjct: 144 EGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARASMLKFKPASVPKTKKKKHCILL 200
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 134 bits (324), Expect = 1e-32
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
LWDTAGQEDYDRLRPLSYPD+ VIL+CF+VDSPDSL+N+ EKW EV HFC ++PI+LV
Sbjct: 58 LWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVA 117
Query: 436 NKKDLRNDPATINELRKMKQEPV 504
K DLRNDP I EL K Q PV
Sbjct: 118 CKADLRNDPKIIEELSKTNQHPV 140
Score = 101 bits (241), Expect = 1e-22
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +2
Query: 98 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
+R+KLVIVGDGACGKTCLLIVFSK FPEVYVPTVFENYVAD+EVDG+ VEL
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVEL 56
Score = 64.1 bits (149), Expect = 2e-11
Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 9/59 (15%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-----QVK----KKKKTRCSLL 661
EG+A+A+KI A+ YLECSAK+ EGVREVFE+ATRAA+ +VK KKK RC LL
Sbjct: 144 EGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHKPKVKPSSGTKKKKRCILL 202
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 123 bits (296), Expect = 3e-29
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GL+DTAGQEDYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PEV H CP VP ++V
Sbjct: 54 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIV 113
Query: 433 GNKKDLRNDPATINELRKMKQEPV 504
G + DLR+DP+ +L + Q P+
Sbjct: 114 GTQIDLRDDPSVQQKLARQHQHPL 137
Score = 59.3 bits (137), Expect = 6e-10
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV 232
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + +
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMI 46
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ--VKKKKKTRCSLL 661
+G +A ++ A Y+ECSA +++G++ VF+ A AAL V KKK++C +L
Sbjct: 141 QGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPHKKKSKCLVL 192
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 121 bits (292), Expect = 1e-28
Identities = 53/83 (63%), Positives = 62/83 (74%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
LWDTAGQE+YDRLRPLSYP+++VIL+CFS+D P SL N+ EKW PEV+HFCP PI+LVG
Sbjct: 68 LWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVG 127
Query: 436 NKKDLRNDPATINELRKMKQEPV 504
K DLR D LR PV
Sbjct: 128 LKADLRKDRNATEVLRTQGLTPV 150
Score = 79.8 bits (188), Expect = 4e-16
Identities = 38/62 (61%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = +2
Query: 74 ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV--DGKQV 247
+ SG + KKLV+VGDG CGKTCLLIVFS FPE YVPTVFENY+ DI + K +
Sbjct: 5 KKSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVI 64
Query: 248 EL 253
EL
Sbjct: 65 EL 66
Score = 33.5 bits (73), Expect = 0.034
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK---KKTRCSLL 661
+ +++A +NA Y+ECSAK GV EVF+ A L +KK K C +L
Sbjct: 154 QAQSVALSMNA-PYVECSAKENTGVNEVFQLA--VGLTIKKSFSFSKKSCVIL 203
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 117 bits (281), Expect = 2e-27
Identities = 51/93 (54%), Positives = 66/93 (70%)
Frame = +1
Query: 238 KTSGTGLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNV 417
K+ LWDTAGQE+Y+RLRP+SY +IL+ F++DSPDSLEN+ KW E+ CPNV
Sbjct: 54 KSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNV 113
Query: 418 PIILVGNKKDLRNDPATINELRKMKQEPVKRRR 516
P ILVG K DLR+DP I E+R+ Q VK ++
Sbjct: 114 PFILVGMKADLRSDPVAIEEMRRRNQNFVKSQQ 146
Score = 81.4 bits (192), Expect = 1e-16
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +2
Query: 98 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
IR+KLV+VGDGACGKT LL VF+ FP YVPTVFENYV+D VDGK V+L
Sbjct: 7 IRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQL 58
Score = 45.6 bits (103), Expect = 8e-06
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVK----KKKKTRCSLL 661
+ +A++I A Y+ECS+ + +GV +VFE ATRAAL V+ K T+C ++
Sbjct: 146 QAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAALTVRDSENDKSSTKCCII 199
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 96.7 bits (230), Expect = 3e-21
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
LWDTAGQE+YD+LR LSY DT VI++CF+VDS DSLEN+ KW PEV CP V ++LV
Sbjct: 65 LWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVA 124
Query: 436 NKKDLR 453
K DLR
Sbjct: 125 LKCDLR 130
Score = 74.5 bits (175), Expect = 1e-14
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 98 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
I +K+VI+GDGA GKT LL VF+K FP+VY PT+FENY+ DI VDG +EL
Sbjct: 12 IYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIEL 63
Score = 48.0 bits (109), Expect = 1e-06
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +2
Query: 491 SKSL*NAEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK 637
SK + EG A A+KINA YLECSAK GV E F A R AL + +
Sbjct: 140 SKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQPR 188
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 52.0 bits (119), Expect = 9e-08
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
+WDTAGQE LR Y ++ F V S + +N+P W V+ C N+PI+L G
Sbjct: 62 VWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVR-VCENIPIVLCG 120
Query: 436 NKKDLR 453
NK D++
Sbjct: 121 NKVDVK 126
Score = 29.1 bits (62), Expect = 0.72
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
KLV+VGDG GKT + +F + Y+ T+
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATL 42
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 50.4 bits (115), Expect = 3e-07
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILV 432
LWDTAGQE + L P D+ V ++ + + + +S N EKW +V+ +V I+LV
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLV 122
Query: 433 GNKKDLRNDPATINELRKMKQEPVK 507
GNK DL + E + K + +K
Sbjct: 123 GNKTDLADKRQVTQEEGEKKAKELK 147
Score = 32.3 bits (70), Expect = 0.078
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 95 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
++RK KLV +G+ + GKT L+ F DQF Y T+
Sbjct: 8 SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATI 44
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 49.2 bits (112), Expect = 6e-07
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-NVPIILV 432
+WDTAGQE Y L P+ Y + + ++ + + SLE + W E++ P + I L
Sbjct: 68 IWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQRQAPEGIVIALA 126
Query: 433 GNKKDLRNDPATINE 477
GNK DL + + +
Sbjct: 127 GNKLDLAQERRAVEK 141
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 89 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
+ I +KLV++GD A GK+ L++ F KDQF + T+
Sbjct: 10 VVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTI 47
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/50 (40%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GK+CLL+ FS+D F ++ T+ ++ + IE+DGK+++L
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Score = 42.3 bits (95), Expect = 7e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
+WDTAGQE + + Y IL+ + V S +N+ ++ +H NV IL+G
Sbjct: 62 IWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIG 121
Query: 436 NKKD 447
NK D
Sbjct: 122 NKCD 125
Score = 28.7 bits (61), Expect = 0.96
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKK 640
+G+A+A+++ +LE SAK+ V E F T R ++KK+K
Sbjct: 136 QGQALADELGV-KFLEASAKTNVNVDEAFFTLAR---EIKKQK 174
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 46.8 bits (106), Expect = 3e-06
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILV 432
+WDTAGQE Y + Y L+ + + S +N+ +W E++ H N+ I+LV
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNV-GRWLKELREHADSNIVIMLV 121
Query: 433 GNKKDL 450
GNK DL
Sbjct: 122 GNKTDL 127
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVE 250
K V++GD GK+ LL+ F++++F T+ E +I +D K+++
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIK 60
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 45.6 bits (103), Expect = 8e-06
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + E++GK V+L
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKL 59
Score = 45.6 bits (103), Expect = 8e-06
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 238 KTSGTGLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PN 414
KT +WDTAGQE + + Y I++ + V DS N+ ++W E+ +
Sbjct: 55 KTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNV-KQWLQEIDRYAVEG 113
Query: 415 VPIILVGNKKDL 450
V +LVGNK D+
Sbjct: 114 VNRLLVGNKSDM 125
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILV 432
+WDTAGQE + + Y ++ + V + DS E + W +++ P+ + ++L
Sbjct: 66 IWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL-SSWLSDIRAMAPSTICVVLA 124
Query: 433 GNKKDLRN 456
G+K DL+N
Sbjct: 125 GSKSDLQN 132
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI 226
K+V+ G GK+CLL F K+Q+ + TV ++ + I
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRI 50
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 43.6 bits (98), Expect = 3e-05
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 241
KLV+VGDG GK+ L I + F + Y PT+ ++Y E+DG+
Sbjct: 10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGE 54
Score = 32.7 bits (71), Expect = 0.059
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGN 438
DTAGQE+Y +R + L+ +++ S S + I + ++ P++LV N
Sbjct: 62 DTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVAN 121
Query: 439 KKDL 450
K DL
Sbjct: 122 KCDL 125
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 509 AEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKK 643
AEG +A+ ++ Y+E SAK + V E F + R + K ++
Sbjct: 134 AEGEQLAKSMHCL-YVETSAKLRLNVEEAFYSLVRTIRRYNKSEE 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 40.7 bits (91), Expect = 2e-04
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE-VKHFCPN----VP 420
LWDTAGQE + L Y D ++ + V++ S E + + W E + P+ P
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETL-DSWRDEFLIQASPSNPETFP 119
Query: 421 IILVGNKKDLRNDPATINELRKM 489
IL+GNK D+ +++ + +
Sbjct: 120 FILLGNKVDVEEQKRMVSKSKAL 142
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 551 YLECSAKSKEGVREVFETATRAALQ 625
Y E SAK V+E FET + AL+
Sbjct: 153 YFETSAKEAINVQEAFETVAKLALE 177
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVEL 253
K+VI+GD GKTCL+ F +F Y T+ +++ D+ VD K V L
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTL 59
Score = 39.1 bits (87), Expect = 7e-04
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN----VPI 423
LWDTAGQE + L Y D ++ ++V++ S +++ E W E + P
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPF 119
Query: 424 ILVGNKKD 447
I+VGN+ D
Sbjct: 120 IIVGNQID 127
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 551 YLECSAKSKEGVREVFETATRAALQ 625
+ E SAK V ++FET +R AL+
Sbjct: 154 HFEASAKENTNVTDLFETVSRLALE 178
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 35.5 bits (78), Expect = 0.008
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 250 TGLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPII 426
T + DTAGQ++Y L ++ +S+ S S E + + H VPI+
Sbjct: 56 TEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIV 115
Query: 427 LVGNKKDLRNDPATINE 477
+VGNK DL A E
Sbjct: 116 VVGNKSDLHMQRAVTAE 132
Score = 33.5 bits (73), Expect = 0.034
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 89 MAAIR-KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ 244
MA I+ +++ ++G + GK+ L + + ++ F E Y PT+ + +I+ G++
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQE 53
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 14 DEQRRLKKVSIKPIFRRN*PESSGPMAAIRKK--LVIVGDGACGKTCLL 154
D +R+ + + I + P + I KK ++VGD A GKTC+L
Sbjct: 1838 DVERQKTLLDSQNILQSQLPVLESVITCINKKWPCILVGDTATGKTCIL 1886
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV 217
K+ ++GD + GKT L++ + + F E T+ N++
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFM 48
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 328 LMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK-KDLRN 456
++C S E + W P + NVPI+L NK +DL N
Sbjct: 77 VICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDN 120
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 424 ILVGNKKDLRNDPATI-NELRKMKQEPVKRRRPGY 525
IL NKK+ DP I + + PV RR+PG+
Sbjct: 1088 ILSLNKKNSYKDPQVIVDSFEGVTLNPVMRRKPGF 1122
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 434 ATKKTSATIPPPSTSFAK*SKS-L*NAEGRAMAEKINAFAYLECSAKSKEGV 586
+T+K S T+P P TSF +S + + A+A + F L ++ S G+
Sbjct: 139 STRKRSLTVPTPRTSFPHHPRSRRFSLKNAAIATSYHKFKPLSSNSLSSSGM 190
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 156 ISRHVLPHAPSPTITNFLRIAAIGPED 76
I H+LP+ TITNF R+ G D
Sbjct: 188 IENHLLPNELPLTITNFFRLGTPGFTD 214
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 355 DSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 453
DS E + WTPE+ + V +I + +K +R
Sbjct: 367 DSKEQLLAYWTPEITNQPARVALISIPSKSTIR 399
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 325 SHPYLDTRAAAADRNLLGQRYPTDQFH 245
SHPY + N +GQ+ + QFH
Sbjct: 193 SHPYANASFPHDPANAMGQQIDSSQFH 219
>SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase
Alg5 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 89 MAAIRKKLVIVGDGACGKT-CLLIVFSKDQFPEVYVPTVFENYVADIEV 232
M K L I+G G T C +FS++ + ++ E ++ DIEV
Sbjct: 214 MHCFHKLLQILGIREIGDTQCGFKLFSREAYQSIFPRMHVEGWIFDIEV 262
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,233,260
Number of Sequences: 5004
Number of extensions: 68473
Number of successful extensions: 287
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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