Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0003
         (763 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   126   1e-30
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   114   3e-27
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            53   1e-08
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.4  
AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450 pr...    24   4.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   5.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   5.9  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    23   7.8  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  126 bits (303), Expect = 1e-30
 Identities = 56/88 (63%), Positives = 64/88 (72%)
 Frame = +1

Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
           GLWDTAGQEDYDRLRPLSYP TDV L+C+SV SP S EN+  KW PE+KH CP+ PIILV
Sbjct: 57  GLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILV 116

Query: 433 GNKKDLRNDPATINELRKMKQEPVKRRR 516
           G K DLR D  TI+ L       +KR +
Sbjct: 117 GTKIDLREDRETISLLADQGLSALKREQ 144



 Score = 65.3 bits (152), Expect = 2e-12
 Identities = 29/49 (59%), Positives = 35/49 (71%)
 Frame = +2

Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
           K V+VGDG  GKTC+LI ++ D FP  YVPT F+NY A + VDG QV L
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSL 56



 Score = 37.1 bits (82), Expect = 6e-04
 Identities = 14/32 (43%), Positives = 24/32 (75%)
 Frame = +2

Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETA 607
           +G+ +A KI A  Y+ECSA ++ G+++VF+ A
Sbjct: 144 QGQKLANKIRAVKYMECSALTQRGLKQVFDEA 175


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  114 bits (274), Expect = 3e-27
 Identities = 48/80 (60%), Positives = 61/80 (76%)
 Frame = +1

Query: 265 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 444
           +AGQEDYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H C   P +LVG + 
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 445 DLRNDPATINELRKMKQEPV 504
           DLR++ +T+ +L K KQ+P+
Sbjct: 61  DLRDENSTLEKLAKNKQKPI 80



 Score = 42.3 bits (95), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = +2

Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 661
           +G  +A+++ A  Y+ECSA +++G++ VF+ A  AAL+  +  KK +C  L
Sbjct: 84  QGEKLAKELKAVKYVECSALTQKGLKNVFDVAILAALEPPEPTKKRKCRFL 134


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 52.8 bits (121), Expect = 1e-08
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +1

Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILV 432
           +WDTAGQE Y  L P+ Y      ++ + + + DS     + W  E+ +   PN+ I L 
Sbjct: 77  IWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFAR-AKTWVKELQRQASPNIVIALA 135

Query: 433 GNKKDLRN 456
           GNK DL N
Sbjct: 136 GNKADLAN 143



 Score = 31.1 bits (67), Expect = 0.039
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
           KLV++G+ A GK+ L++ F K QF E    T+
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 57


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
 Frame = +2

Query: 476  SFAK*SKSL*NAEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVK----KKKK 643
            S AK  +S  +   +     + A   L+   +  +   E FE A + A + K    K K 
Sbjct: 1005 SLAKELQSKLDTLEKIQTPNMKAMQKLDRVTEKIQSTNEEFEAARKKAKKAKAAFEKVKN 1064

Query: 644  TRCSLL*VCC 673
             RC+L   CC
Sbjct: 1065 ERCTLFTNCC 1074


>AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 343 PRST*GSHPYLDTRAAAADRNLLGQRYPTDQFHLFSIH 230
           P  + G HP+     +   R+ +G+RY      L  +H
Sbjct: 64  PERSQGRHPHAYAPFSMGSRDCIGKRYAIQGMKLVLVH 101


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 585  TPSLLLAEHSRYANALIFSAIARPSAFHRLLLHFA 481
            +P  L    S   N  IF+++A    FH+  LH +
Sbjct: 2044 SPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLS 2078


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -1

Query: 382 TSLGCSRANP-ASPPRST*GSH 320
           T   CS A+   SPPRS  GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -1

Query: 382 TSLGCSRANP-ASPPRST*GSH 320
           T   CS A+   SPPRS  GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 541 VNLFSHSPAFCVSQALASFCEAR 473
           +NLF   P F    ++A++C  R
Sbjct: 96  INLFLQQPDFATLMSVATYCRDR 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,917
Number of Sequences: 2352
Number of extensions: 17624
Number of successful extensions: 55
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)