Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0003
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 176 2e-44
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 176 2e-44
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 130 8e-31
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 130 8e-31
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 130 8e-31
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 130 8e-31
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 130 8e-31
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 124 9e-29
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 124 9e-29
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 124 9e-29
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 118 3e-27
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 118 3e-27
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 117 8e-27
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 117 8e-27
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 73 2e-13
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 68 8e-12
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 52 3e-07
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 50 2e-06
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 50 2e-06
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 49 4e-06
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 48 6e-06
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 48 6e-06
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 48 6e-06
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 48 7e-06
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 48 7e-06
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 47 1e-05
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 47 1e-05
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 47 1e-05
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 47 1e-05
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 46 4e-05
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 44 9e-05
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 44 9e-05
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 44 9e-05
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 44 1e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 44 2e-04
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 44 2e-04
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 44 2e-04
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 44 2e-04
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 44 2e-04
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 44 2e-04
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 44 2e-04
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 43 2e-04
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 43 3e-04
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 42 4e-04
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 42 5e-04
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 41 0.001
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 41 0.001
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 40 0.002
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 40 0.002
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 40 0.002
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 38 0.008
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 38 0.008
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 38 0.008
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 38 0.008
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 37 0.014
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 36 0.041
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 35 0.073
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 34 0.096
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 33 0.17
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 33 0.17
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 33 0.22
U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical pr... 33 0.29
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 31 0.68
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 31 0.89
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 31 1.2
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 29 2.7
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 29 3.6
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 29 3.6
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 29 3.6
AF040661-7|AAG24223.1| 439|Caenorhabditis elegans Hypothetical ... 28 6.3
U97003-6|AAB52273.1| 402|Caenorhabditis elegans Hypothetical pr... 28 8.3
U97003-4|AAB52268.2| 370|Caenorhabditis elegans Hypothetical pr... 28 8.3
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 28 8.3
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 176 bits (428), Expect = 2e-44
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
LWDTAGQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEV+HFCPNVPIILVG
Sbjct: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVG 116
Query: 436 NKKDLRNDPATINELRKMKQEPVK 507
NK+DLR+DP T+ EL KMKQEPVK
Sbjct: 117 NKRDLRSDPQTVRELAKMKQEPVK 140
Score = 116 bits (278), Expect = 2e-26
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +2
Query: 89 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFP+VYVPTVFENYVADIEVDGKQVEL
Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVEL 55
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/50 (72%), Positives = 46/50 (92%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 661
+GRA+AE+I AFAYLECSAK+K+G+REVFE AT+AALQ KKKKK++C +L
Sbjct: 143 QGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQQKKKKKSKCMIL 192
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 176 bits (428), Expect = 2e-44
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
LWDTAGQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEV+HFCPNVPIILVG
Sbjct: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVG 116
Query: 436 NKKDLRNDPATINELRKMKQEPVK 507
NK+DLR+DP T+ EL KMKQEPVK
Sbjct: 117 NKRDLRSDPQTVRELAKMKQEPVK 140
Score = 116 bits (278), Expect = 2e-26
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +2
Query: 89 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFP+VYVPTVFENYVADIEVDGKQVEL
Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVEL 55
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/50 (72%), Positives = 46/50 (92%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 661
+GRA+AE+I AFAYLECSAK+K+G+REVFE AT+AALQ KKKKK++C +L
Sbjct: 143 QGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQQKKKKKSKCMIL 192
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 130 bits (315), Expect = 8e-31
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GLWDTAGQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILV
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILV 113
Query: 433 GNKKDLRNDPATINELRKMKQEPVKRRRPGY 525
G K DLR D T+ LR+ + +PV + + GY
Sbjct: 114 GTKADLREDRDTVERLRERRLQPVSQTQ-GY 143
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG+ + L
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINL 53
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/51 (41%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 661
+G MA++I A YLECSA ++ G+++VF+ A RA + ++ KK++C++L
Sbjct: 141 QGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTPPQRAKKSKCTVL 191
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 130 bits (315), Expect = 8e-31
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GLWDTAGQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILV
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILV 113
Query: 433 GNKKDLRNDPATINELRKMKQEPVKRRRPGY 525
G K DLR D T+ LR+ + +PV + + GY
Sbjct: 114 GTKADLREDRDTVERLRERRLQPVSQTQ-GY 143
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG+ + L
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINL 53
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/51 (41%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 661
+G MA++I A YLECSA ++ G+++VF+ A RA + ++ KK++C++L
Sbjct: 141 QGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTPPQRAKKSKCTVL 191
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 130 bits (315), Expect = 8e-31
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GLWDTAGQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILV
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILV 113
Query: 433 GNKKDLRNDPATINELRKMKQEPVKRRRPGY 525
G K DLR D T+ LR+ + +PV + + GY
Sbjct: 114 GTKADLREDRDTVERLRERRLQPVSQTQ-GY 143
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG+ + L
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINL 53
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/51 (41%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 661
+G MA++I A YLECSA ++ G+++VF+ A RA + ++ KK++C++L
Sbjct: 141 QGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTPPQRAKKSKCTVL 191
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 130 bits (315), Expect = 8e-31
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GLWDTAGQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILV
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILV 113
Query: 433 GNKKDLRNDPATINELRKMKQEPVKRRRPGY 525
G K DLR D T+ LR+ + +PV + + GY
Sbjct: 114 GTKADLREDRDTVERLRERRLQPVSQTQ-GY 143
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG+ + L
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINL 53
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 661
+G MA++I A YLECSA ++ G+++VF+ A RA L ++ KK++C++L
Sbjct: 141 QGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTPPQRAKKSKCTVL 191
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 130 bits (315), Expect = 8e-31
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GLWDTAGQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILV
Sbjct: 54 GLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILV 113
Query: 433 GNKKDLRNDPATINELRKMKQEPVKRRRPGY 525
G K DLR D T+ LR+ + +PV + + GY
Sbjct: 114 GTKADLREDRDTVERLRERRLQPVSQTQ-GY 143
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG+ + L
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINL 53
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 661
+G MA++I A YLECSA ++ G+++VF+ A RA L ++ KK++C++L
Sbjct: 141 QGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTPPQRAKKSKCTVL 191
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 124 bits (298), Expect = 9e-29
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GL+DTAGQEDYDRLRPLSYP TDV L+CFSV +P S EN+ EKW PE+ H C P +LV
Sbjct: 54 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLV 113
Query: 433 GNKKDLRNDPATINELRKMKQEPV 504
G + DLR+DP + +L K KQ+PV
Sbjct: 114 GTQVDLRDDPGMLEKLAKNKQKPV 137
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 515 GRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 661
G +A+++ A Y+ECSA +++G++ VF+ A AAL +++KK +C++L
Sbjct: 142 GEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALDPPQQEKKKKCNIL 191
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 124 bits (298), Expect = 9e-29
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GL+DTAGQEDYDRLRPLSYP TDV L+CFSV +P S EN+ EKW PE+ H C P +LV
Sbjct: 54 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLV 113
Query: 433 GNKKDLRNDPATINELRKMKQEPV 504
G + DLR+DP + +L K KQ+PV
Sbjct: 114 GTQVDLRDDPGMLEKLAKNKQKPV 137
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + G+ L
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAMIGGEPYTL 53
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/50 (36%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 515 GRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 661
G +A+++ A Y+ECSA +++ ++ VF+ A AAL +++KK +C++L
Sbjct: 142 GEKLAKELKAVKYVECSALTEKELKNVFDEAILAALDPPQQEKKKKCNIL 191
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 124 bits (298), Expect = 9e-29
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GL+DTAGQEDYDRLRPLSYP TDV L+CFSV +P S EN+ EKW PE+ H C P +LV
Sbjct: 51 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLV 110
Query: 433 GNKKDLRNDPATINELRKMKQEPV 504
G + DLR+DP + +L K KQ+PV
Sbjct: 111 GTQVDLRDDPGMLEKLAKNKQKPV 134
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 50
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 515 GRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 661
G +A+++ A Y+ECSA +++G++ VF+ A AAL +++KK +C++L
Sbjct: 139 GEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALDPPQQEKKKKCNIL 188
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 118 bits (285), Expect = 3e-27
Identities = 52/90 (57%), Positives = 65/90 (72%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
LWDTAGQ+DYD+ R LS+P TDV L+CF++++P S EN+ KW PEV H CPN PIILVG
Sbjct: 55 LWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVG 114
Query: 436 NKKDLRNDPATINELRKMKQEPVKRRRPGY 525
K DLR D TI LR+ + +PV + GY
Sbjct: 115 TKADLREDRDTIERLRERRLQPVSHTQ-GY 143
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLL+ ++ + FP Y+ TVF+ Y ++ VDG+ + L
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINL 53
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 506 NAEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTR 649
+ +G MA++I A YLECSA ++ G+++VF+ A R L + +TR
Sbjct: 139 HTQGYVMAKEIKAVKYLECSALTQIGLKQVFDEAIRTGLTPPQTPQTR 186
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 118 bits (285), Expect = 3e-27
Identities = 52/90 (57%), Positives = 65/90 (72%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
LWDTAGQ+DYD+ R LS+P TDV L+CF++++P S EN+ KW PEV H CPN PIILVG
Sbjct: 55 LWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVG 114
Query: 436 NKKDLRNDPATINELRKMKQEPVKRRRPGY 525
K DLR D TI LR+ + +PV + GY
Sbjct: 115 TKADLREDRDTIERLRERRLQPVSHTQ-GY 143
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLL+ ++ + FP Y+ TVF+ Y ++ VDG+ + L
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINL 53
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 506 NAEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTR 649
+ +G MA++I A YLECSA ++ G+++VF+ A R L + +TR
Sbjct: 139 HTQGYVMAKEIKAVKYLECSALTQIGLKQVFDEAIRTGLTPPQTPQTR 186
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 117 bits (282), Expect = 8e-27
Identities = 48/86 (55%), Positives = 63/86 (73%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GLWDTAGQEDYDRLRPLSYP TDV ++CFSV SP S +N+ KW PE++ CP+ P+ILV
Sbjct: 58 GLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILV 117
Query: 433 GNKKDLRNDPATINELRKMKQEPVKR 510
G K DLR++ + L+ + P+ +
Sbjct: 118 GTKLDLRDEAEPMRALQAEGKSPISK 143
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDG GKTC+LI ++ D FP YVPTVF+NY A + +DG V L
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNL 57
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVK-KKKKTRCSLL 661
+G MA+KI A YLECSA +++G+ +VFE A R+ L K +KKK C+++
Sbjct: 145 QGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHPKPQKKKKSCNIM 195
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 117 bits (282), Expect = 8e-27
Identities = 48/86 (55%), Positives = 63/86 (73%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILV 432
GLWDTAGQEDYDRLRPLSYP TDV ++CFSV SP S +N+ KW PE++ CP+ P+ILV
Sbjct: 58 GLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILV 117
Query: 433 GNKKDLRNDPATINELRKMKQEPVKR 510
G K DLR++ + L+ + P+ +
Sbjct: 118 GTKLDLRDEAEPMRALQAEGKSPISK 143
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDG GKTC+LI ++ D FP YVPTVF+NY A + +DG V L
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNL 57
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVK-KKKKTRCSLL 661
+G MA+KI A YLECSA +++G+ +VFE A R+ L K +KKK C+++
Sbjct: 145 QGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHPKPQKKKKSCNIM 195
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 238 KTSGTGLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PN 414
K L+DTAGQ +Y+++R LSYP +V L+CFS+ +LE+ W PE++ + N
Sbjct: 50 KNYAVNLFDTAGQGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDN 109
Query: 415 VPIILVGNKKDLRNDPATIN 474
VPI+LVG K DL +D + N
Sbjct: 110 VPIMLVGTKNDLVDDADSRN 129
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 241
KLV+VGD GKT LL+ ++K QF + Y TVF+N+ + +D K
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNK 50
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 518 RAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKT 646
+ +A +I + CSA + +G++ VF+ + AA+ VK +++T
Sbjct: 137 KRVAHEIGCHKFYSCSALTHKGLKRVFDESFLAAVGVKLEEET 179
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG+ + L
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINL 53
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 661
+G MA++I A YLECSA ++ G+++VF+ A RA L ++ KK++C++L
Sbjct: 79 QGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTPPQRAKKSKCTVL 129
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 253 GLWDTAGQEDYDRLR 297
GLWDTAGQEDYDRLR
Sbjct: 54 GLWDTAGQEDYDRLR 68
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
L DTAGQ +D LRPL Y D DV ++ +SV S E++ W PEV P +ILVG
Sbjct: 61 LHDTAGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTKRNPGTKLILVG 120
Query: 436 NKKDLR 453
+ D R
Sbjct: 121 TQADQR 126
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K + VG+ A GKT +++ ++ + +P YVPT F+N+ + VD K + L
Sbjct: 11 KCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNFSVVVLVDKKPIRL 59
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
+WDTAGQE + LR Y ++ F V + + +N+P W ++ C N+PI+L G
Sbjct: 62 VWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVP-NWHRDLARVCENIPIVLCG 120
Query: 436 NKKDLRN 456
NK D+++
Sbjct: 121 NKVDVKD 127
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
KLV+VGDG GKT + +F + YV T+
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 42
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILV 432
+WDTAGQE Y L P+ Y ++ +L+ F + S E + + W E+K N I++V
Sbjct: 65 IWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKV-KNWVLEIKTCLGNTAEILIV 123
Query: 433 GNKKDLRND 459
GNK DL +
Sbjct: 124 GNKIDLEEE 132
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/55 (25%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 74 ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FENYVADIE 229
E++ + + K+V++G+G GK+ L++ F +++F ++ T+ F+N ++E
Sbjct: 3 ETNVDQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVE 57
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 238 KTSGTGLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPN 414
KT +WDTAGQE Y + Y L+ + + + EN+ E+W E++ H N
Sbjct: 58 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENV-ERWLKELRDHADQN 116
Query: 415 VPIILVGNKKDLRNDPATINELRKMKQE 498
+ I+LVGNK DLR+ A + K+ E
Sbjct: 117 IVIMLVGNKSDLRHLRAVPTDEAKIYAE 144
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVE 250
K+V++GD GK+ LL F++++F T+ E I V+GK V+
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 61
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILV 432
LWDTAG E Y + Y ++ + + + S EN+ + W E+K H PN ++LV
Sbjct: 59 LWDTAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLV 118
Query: 433 GNKKDL 450
GNK D+
Sbjct: 119 GNKADM 124
Score = 35.9 bits (79), Expect = 0.031
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
K+V+VGD CGK+C+L+ F+++ F ++ T+
Sbjct: 8 KIVVVGDHNCGKSCILLRFAENSFRMDHISTL 39
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILV 432
+WDTAGQE Y L P+ Y ++ + + + +S + + W E+ + PN+ + L
Sbjct: 72 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQK-AKNWVKELQRQASPNIVMALA 130
Query: 433 GNKKDLRN 456
GNK D+ N
Sbjct: 131 GNKADVAN 138
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 83 GPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
GP + KLV++G+ A GK+ L++ F K QF E T+
Sbjct: 13 GPNRTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 52
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVG 435
DTAGQEDY +R Y + + FS+ +S E E + VK+ +VPI+LVG
Sbjct: 71 DTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVG 130
Query: 436 NKKDLRNDPATINELRKMKQE 498
NK D+R+ EL + + E
Sbjct: 131 NKGDMRDQRVVSAELCRQRAE 151
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 86 PMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
P + K+++VG G GK+ L + F D+F E Y PT ++Y + +DG++ +
Sbjct: 12 PQQQVVHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSI 67
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 247
KLV++GDG GK+ L I F + QF + Y PT+ + Y+ E+DG V
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWV 65
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGN 438
DTAGQE++ +R L+ FSV S E + + ++ P++LV N
Sbjct: 71 DTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVAN 130
Query: 439 KKDLRN 456
K DL N
Sbjct: 131 KVDLIN 136
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 247
KLV++GDG GK+ L I F + QF + Y PT+ + Y+ E+DG V
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWV 65
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGN 438
DTAGQE++ +R L+ FSV S E + + ++ P++LV N
Sbjct: 71 DTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVAN 130
Query: 439 KKDLRN 456
K DL N
Sbjct: 131 KVDLIN 136
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG 435
+WDTAGQE + + Y T +++ + V + +S N+ ++W E+++ C +V +LVG
Sbjct: 63 IWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNV-KRWLQEIENNCDSVQKVLVG 121
Query: 436 NK 441
NK
Sbjct: 122 NK 123
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/50 (34%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+I+GD GK+ LL+ F+ + F E Y+ T+ ++ + ++++G++V+L
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKL 61
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 238 KTSGTGLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPN 414
KT +WDTAGQE + + Y I++ + + ++ N+ ++W E+ ++ C N
Sbjct: 58 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNV-KQWLQEIDRYACEN 116
Query: 415 VPIILVGNKKDL 450
V +LVGNK DL
Sbjct: 117 VNKLLVGNKCDL 128
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPII--L 429
+WDTAGQE + L P Y ++ + V S S E + W EV +C N II +
Sbjct: 64 IWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-NHWMQEVDTYCTNDNIIKMM 122
Query: 430 VGNKKDLRNDPATINE 477
V NK D+ N T E
Sbjct: 123 VANKIDMPNRVVTREE 138
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVE 250
+SS P+ + K++I+G+ GK+ L++ F D F T+ ++ V + +DG +V+
Sbjct: 4 DSSSPLTTL--KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVK 61
Query: 251 L 253
L
Sbjct: 62 L 62
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILV 432
+WDT GQE + + Y + I++C+ + S ++ ++W +V F PNV +L+
Sbjct: 63 IWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSL-QRWIDDVSKFAAPNVVKLLI 121
Query: 433 GNKKDLRNDPATINELRKMKQ 495
G K DL + A E +M Q
Sbjct: 122 GTKCDLEDQRAIEAEEAEMLQ 142
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
K+V+VGD GKTC++ F F + T+ ++ + + VDGK+V+L
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKL 61
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILV 432
+WDTAGQE + + Y D D +L+ + + + S EN W ++K + V + LV
Sbjct: 56 IWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENC-RNWLSQIKEYGKEAVQVTLV 114
Query: 433 GNKKDL 450
GNK DL
Sbjct: 115 GNKCDL 120
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQF 178
K++++GD GKTCLLI + F
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAF 27
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILV 432
+WDTAGQE + + Y D D +L+ + + + S EN W ++K + V + LV
Sbjct: 56 IWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENC-RNWLSQIKEYGKEAVQVTLV 114
Query: 433 GNKKDL 450
GNK DL
Sbjct: 115 GNKCDL 120
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQF 178
K++++GD GKTCLLI + F
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAF 27
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GKTC+L FS D F ++ T+ ++ + IE+DGK+++L
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKL 59
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILV 432
+WDTAGQE + + Y I++ + + + S ENI + W + +H +V +++
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENI-KNWIRNIEEHAASDVERMII 119
Query: 433 GNK 441
GNK
Sbjct: 120 GNK 122
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-H-FCPNVPIIL 429
LWDTAGQE + L + D ++ F + + S NI + W ++K H +C II+
Sbjct: 69 LWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRD-WLSQLKVHAYCEQPDIII 127
Query: 430 VGNKKDLRN 456
GNK DL N
Sbjct: 128 CGNKADLEN 136
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GKTC+L FS D F ++ T+ ++ + IE+DGK+++L
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKL 59
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILV 432
+WDTAGQE + + Y I++ + + + S ENI + W + +H +V +++
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENI-KNWIRNIEEHAASDVERMII 119
Query: 433 GNKKDL 450
GNK D+
Sbjct: 120 GNKCDI 125
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-H-FCPNVPIIL 429
LWDTAGQE + L + D ++ F + + S NI + W ++K H +C II+
Sbjct: 69 LWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRD-WLSQLKVHAYCEQPDIII 127
Query: 430 VGNKKDLRN 456
GNK DL N
Sbjct: 128 CGNKADLEN 136
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GKTC+L FS D F ++ T+ ++ + IE+DGK+++L
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKL 59
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILV 432
+WDTAGQE + + Y I++ + + + S ENI + W + +H +V +++
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENI-KNWIRNIEEHAASDVERMII 119
Query: 433 GNKKDL 450
GNK D+
Sbjct: 120 GNKCDI 125
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K+V++G G GK+ L + F + F E Y PT+ ++Y +EVDG+Q L
Sbjct: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCML 53
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGN 438
DTAG E + +R L + ++ +S+ + + ++ + ++ VP+ILVGN
Sbjct: 57 DTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGN 116
Query: 439 KKDLRND 459
K DL ++
Sbjct: 117 KCDLEDE 123
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPII--L 429
+WDTAGQE + L P Y ++ + V S S E + W EV +C N II +
Sbjct: 37 IWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-NHWMQEVDTYCTNDNIIKMM 95
Query: 430 VGNKKDL 450
V NK D+
Sbjct: 96 VANKIDM 102
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKH--FCPNVPIIL 429
LWDTAGQE + L P D+ V ++ + + + +S KW +V++ C +V I+L
Sbjct: 64 LWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQ-TTKWVDDVRNERGC-DVIIVL 121
Query: 430 VGNKKDL 450
VGNK DL
Sbjct: 122 VGNKTDL 128
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 95 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
A++K KLV +G+ + GKT ++ F D F Y T+
Sbjct: 8 ALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATI 44
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 241
KLV+VGDG GK+ L I ++ F E Y PT+ ++Y + +DG+
Sbjct: 5 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGE 49
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF--CPNVPIILVG 435
DTAGQE+Y +R + L+ F+V+ S EN+ + +++ +VP++LVG
Sbjct: 57 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENV-ANYREQIRRVKDSDDVPMVLVG 115
Query: 436 NKKDLRN---DPATINELRK 486
NK DL + D T++E K
Sbjct: 116 NKCDLSSRSVDFRTVSETAK 135
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GKTC+L FS D F ++ T+ ++ + IE+ GK+++L
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILV 432
+WDTAGQE + + Y I++ + + + S +NI KW + +H +V +++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNI-AKWLRNIDEHASEDVVKMIL 120
Query: 433 GNKKDL 450
GNK D+
Sbjct: 121 GNKCDM 126
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+++GD GKTC+L FS D F ++ T+ ++ + IE+ GK+++L
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILV 432
+WDTAGQE + + Y I++ + + + S +NI KW + +H +V +++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNI-AKWLRNIDEHASEDVVKMIL 120
Query: 433 GNK 441
GNK
Sbjct: 121 GNK 123
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 241
KLV+VGDG GK+ L I ++ F E Y PT+ ++Y + +DG+
Sbjct: 8 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGE 52
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF--CPNVPIILVG 435
DTAGQE+Y +R + L+ F+V+ S EN+ + +++ +VP++LVG
Sbjct: 60 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENV-ANYREQIRRVKDSDDVPMVLVG 118
Query: 436 NKKDLRN---DPATINELRK 486
NK DL + D T++E K
Sbjct: 119 NKCDLSSRSVDFRTVSETAK 138
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 238 KTSGTGLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPN 414
KT +WDTAGQE Y + Y L+ + + + EN+ E+W E++ H N
Sbjct: 58 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENV-ERWLKELRDHADQN 116
Query: 415 VPIILVGNKKD 447
+ I+ VGNK D
Sbjct: 117 IVIMPVGNKCD 127
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVE 250
K+V++GD GK+ LL F++++F T+ E I V+GK V+
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVK 61
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 441
DTAG E + +R Y ++ FS+ + EN+ + +T + VP+ILVGNK
Sbjct: 57 DTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNK 116
Query: 442 KDL 450
DL
Sbjct: 117 SDL 119
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 253
K+V++G+G GK+ L + + + F Y T+ ++Y +VD + L
Sbjct: 5 KIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARL 53
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILV 432
+WDTAGQE Y + Y ++ + + + +S ++ + W ++K + N ++LV
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKTYSWENAQVVLV 133
Query: 433 GNKKDLRND 459
GNK D+ ++
Sbjct: 134 GNKCDMDSE 142
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
KL+I+G+ + GKT L + D F +V TV
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTV 55
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILV 432
+WDTAGQE Y + Y ++ + + + +S ++ + W ++K + N ++LV
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKTYSWENAQVVLV 133
Query: 433 GNKKDLRND 459
GNK D+ ++
Sbjct: 134 GNKCDMDSE 142
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
KL+I+G+ + GKT L + D F +V TV
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTV 55
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILV 432
LWDTAGQE + L P D+ V ++ + + + +S KW +V+ +V I+LV
Sbjct: 63 LWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQ-TSKWIDDVRTERGSDVIIMLV 121
Query: 433 GNKKDL 450
GNK DL
Sbjct: 122 GNKTDL 127
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
KLV +G+ + GKT L+ F D F Y T+
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATI 43
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILV 432
+WDTAGQE Y + Y ++ + + + +S ++ + W ++K + N ++LV
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKTYSWENAQVVLV 133
Query: 433 GNKKDLRND 459
GNK D+ ++
Sbjct: 134 GNKCDMDSE 142
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
KL+I+G+ + GKT L + D F +V TV
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTV 55
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILV 432
+WDTAGQE Y + Y ++ + + + +S ++ + W ++K + N ++LV
Sbjct: 89 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKTYSWENAQVVLV 147
Query: 433 GNKKDLRND 459
GNK D+ ++
Sbjct: 148 GNKCDMDSE 156
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
KL+I+G+ + GKT L + D F +V TV
Sbjct: 38 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTV 69
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILV 432
+WDTAGQE Y + Y ++ + + + +S ++ + W ++K + N ++LV
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKTYSWENAQVVLV 133
Query: 433 GNKKDLRND 459
GNK D+ ++
Sbjct: 134 GNKCDMDSE 142
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
KL+I+G+ + GKT L + D F +V TV
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTV 55
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILV 432
+WDT GQE + L Y L+ + + S +S ++ E W +++ P++ I+L+
Sbjct: 59 VWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHL-EHWLTDLQRLGDPDIVIVLI 117
Query: 433 GNKKDLRNDPATINELRKMKQEPVKR 510
GNK DL D E+RK + E R
Sbjct: 118 GNKSDLEAD----REVRKEEGEAFAR 139
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVEL 253
K VI+GD GK+ LL+ F F ++ T+ E ++E+D K+V+L
Sbjct: 8 KYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKL 57
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-NVPIILV 432
LWDTAGQE + L + D ++ + V + S + + W +K ++PIILV
Sbjct: 514 LWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRD-WIETIKESTERSIPIILV 572
Query: 433 GNKKDLR 453
GNK D+R
Sbjct: 573 GNKVDMR 579
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVE 250
+++GP A ++V+ GD A GK+ ++ + QF T+ + +V + VDG+ V
Sbjct: 453 DANGP-AERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVA 511
Query: 251 L 253
L
Sbjct: 512 L 512
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 241
K+V++G G GK+ L + F F E Y PT+ + Y +IEVDG+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQ 49
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGN 438
DTAG E + +R L + ++ +S+ S + +I V+ NVPI+LVGN
Sbjct: 57 DTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGN 116
Query: 439 KKDL 450
K DL
Sbjct: 117 KCDL 120
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKK---KKTRCSLL 661
EG A+AE + + ECSAK+ + V F R V+ K K+ CSL+
Sbjct: 130 EGLALAESWSC-PFTECSAKNNQNVNVTFAEIVREMNYVQNKSRQSKSCCSLM 181
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILV 432
+WDTAGQE + + Y I++ + V S + +PE W E++ + V ILV
Sbjct: 60 IWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPE-WLGEIESYANRRVLKILV 118
Query: 433 GNKKD 447
GNK D
Sbjct: 119 GNKVD 123
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
K+V+VG+ GKTCL+ F++ FP T+ ++ + ++V +++L
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKL 58
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF--CPNVPIIL 429
+WDTAGQE + + P+ + D L+ + V ++ E++ EKW ++ + + L
Sbjct: 109 VWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDV-EKWLKDLDRSSGTEDANVYL 167
Query: 430 VGNKKDL 450
+GNK DL
Sbjct: 168 IGNKTDL 174
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPII-LV 432
LWDTAGQE + + + D +++ F V S S N+ W V+ + ++ LV
Sbjct: 256 LWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNV-RNWIDSVRAGVDDATVMCLV 314
Query: 433 GNKKDL 450
GNK DL
Sbjct: 315 GNKMDL 320
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
K+V VGD A GKTC L F ++F ++ T+
Sbjct: 204 KVVFVGDSAVGKTCFLHRFCHNRFKPLFNATI 235
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVEL 253
K +I+GD GK+CLL+ F+ +F V+ T+ + A + +DGKQ++L
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKL 57
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILV 432
+WDTAGQE + + Y L+ + + D+ ++ W + + H N+ I+L+
Sbjct: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHL-TSWLEDARQHSNSNMVIMLI 117
Query: 433 GNKKDL 450
GNK DL
Sbjct: 118 GNKSDL 123
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 274 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 453
QE + LR Y ++ F V + + +N+P W ++ C N+PI+L GNK D++
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPN-WHHDLARVCENIPIVLCGNKVDVK 60
Query: 454 N 456
+
Sbjct: 61 D 61
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILV 432
+WDT GQE++ + Y + L+ + + S ++ E+W +++ H P + I+L+
Sbjct: 59 VWDTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHL-EQWLSDLRQHGHPEMVIMLI 117
Query: 433 GNKKDLR 453
GNK DL+
Sbjct: 118 GNKSDLK 124
Score = 35.1 bits (77), Expect = 0.055
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVEL 253
K VI+GDG GK+ LL+ F+ + F ++ T+ E D+++D +V L
Sbjct: 8 KYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRL 57
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILV 432
+WDTAGQE + + Y LM + + + ++ W + K PN I L+
Sbjct: 64 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL-SSWLADAKSLTNPNTAIFLI 122
Query: 433 GNKKDLRN 456
GNK DL +
Sbjct: 123 GNKADLED 130
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVEL 253
K +I+GD GK+CLL F++ +F T+ E IEV G++++L
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKL 62
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 512 EGRAMAEKINAFAYLECSAKSKEGVREVF-ETA 607
E +A AE+ N +LECSAK+ V + F ETA
Sbjct: 138 EAKAFAEE-NGLTFLECSAKTGSNVEDAFLETA 169
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE-VKHFCP----NVP 420
+WDTAGQE + L Y D ++ F V + S +++ + W E + P + P
Sbjct: 62 IWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSL-DSWRDEFLIQASPRDPDHFP 120
Query: 421 IILVGNKKDLRNDPA 465
+L+GNK DL + A
Sbjct: 121 FVLLGNKVDLESQRA 135
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 80 SGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVEL 253
SG K++I+GD GKT L+ + +F Y T+ +++ D+ +D + V L
Sbjct: 2 SGTRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTL 60
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVEL 253
K +I+GD GK+CLL+ F+ +F V+ T+ + A + +DGKQ++L
Sbjct: 8 KHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKL 57
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/50 (34%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
KL+I+GD GK+ LL+ F+ + F E Y+ T+ ++ + ++++G++V+L
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKL 61
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVG 435
DTAGQE++ +R L+ F+V +S E + + + +K + PIILVG
Sbjct: 71 DTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDR-DDFPIILVG 129
Query: 436 NKKDLRND 459
NK DL N+
Sbjct: 130 NKADLENE 137
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD 235
++V+VG G GK+ L I F + F + Y PT+ ++Y VD
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVD 61
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVG 435
DTAGQE++ +R L+ F+V +S E + + + +K + PIILVG
Sbjct: 71 DTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDR-DDFPIILVG 129
Query: 436 NKKDLRND 459
NK DL N+
Sbjct: 130 NKADLENE 137
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD 235
++V+VG G GK+ L I F + F + Y PT+ ++Y VD
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVD 61
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVG 435
DTAGQE++ +R L+ F+V +S E + + + +K + PIILVG
Sbjct: 71 DTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDR-DDFPIILVG 129
Query: 436 NKKDLRND 459
NK DL N+
Sbjct: 130 NKADLENE 137
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD 235
++V+VG G GK+ L I F + F + Y PT+ ++Y VD
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVD 61
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVG 435
DTAGQE++ +R L+ F+V +S E + + + +K + PIILVG
Sbjct: 71 DTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDR-DDFPIILVG 129
Query: 436 NKKDLRND 459
NK DL N+
Sbjct: 130 NKADLENE 137
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD 235
++V+VG G GK+ L I F + F + Y PT+ ++Y VD
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVD 61
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILV 432
LWDTAGQE + +L P V L+ + + +E++ +W + K+ I+V
Sbjct: 60 LWDTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHL-IRWKGIIDKNKSDFTSTIIV 118
Query: 433 GNKKDL 450
GNK DL
Sbjct: 119 GNKHDL 124
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FENYVADIEVDGKQVEL 253
K+V+VG+ GKT LL F + F + T+ F++ + + DG+ + L
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLN-DGQSIRL 58
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 83 GPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA 220
GP+ + +L+++GD GK+ LL F++ + E+ PTV ++ A
Sbjct: 11 GPLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYA 56
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE 393
LWDTAGQE + + Y ++ +L + + +S E++ E W E
Sbjct: 71 LWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHV-ENWVKE 115
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 262 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-NVPIILVGN 438
DTAGQ++Y D + ++ +++D S E + V+ + ++PI++VGN
Sbjct: 67 DTAGQQEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGN 126
Query: 439 KKDL 450
K DL
Sbjct: 127 KTDL 130
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = +2
Query: 95 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 214
++ +K+ ++G GK+ L++ F+++ FPE Y T+ + +
Sbjct: 11 SLNRKVAVMGYPHVGKSALVLRFTQNIFPERYESTIEDQH 50
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
K+V+VGDGA GKT + F+K+ F + Y T+
Sbjct: 37 KIVVVGDGASGKTSICQRFAKESFDKSYHQTL 68
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 34.3 bits (75), Expect = 0.096
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 256 LWDTAGQEDY-DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFC---PNVP 420
LWDTAGQE Y + Y + + ++ + V +S ++ W E KH VP
Sbjct: 153 LWDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDL-ALWIKECEKHGLVGDSEVP 211
Query: 421 IILVGNKKDL 450
IL+GNK D+
Sbjct: 212 RILIGNKCDV 221
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPE 184
K++IVG+ A GKTCL F +FPE
Sbjct: 102 KVIIVGNAAVGKTCLSFRFCCGRFPE 127
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 280 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTP--EVKHFCPNVPIILVGNKKDLR 453
++ +R LS L+ FSVD S + + + W + +PI++VGNK D+
Sbjct: 75 NFPDMRRLSIASASAFLLVFSVDDVTSFKEMSDIWQEICSRRSDLNELPIVVVGNKCDVE 134
Query: 454 N 456
N
Sbjct: 135 N 135
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 253
K+V+VGD GKTC++ F F + T+ ++ + + VDGK+V+L
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKL 61
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 250 TGLWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN---VP 420
T + D + +E+ + +VI + +SV +++ I KW P ++ P
Sbjct: 58 TSIVDLSIKEEDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETP 117
Query: 421 IILVGNKKD 447
+ILVGNK D
Sbjct: 118 VILVGNKSD 126
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 247
++V++GD CGKT L++ +D++ + VP + + +V + V
Sbjct: 11 RIVLIGDEGCGKTSLVMSLLEDEWVDA-VPRRLDRVLIPADVTPENV 56
>U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical
protein C47C12.4 protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 319 DVILMCFSVDSPDSLENIPEKWTPEVKHFCPN---VPIILVGNKKD 447
+VI + +SV +++ I KW P ++ P+ILVGNK D
Sbjct: 21 NVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSD 66
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVEL 253
K +I+GD GK+CLL F++ +F T+ E IEV G++++L
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKL 62
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 259 WDTAGQEDY-DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFC---PNVPI 423
WDTAGQE Y + Y + + ++ + V +S ++ W E KH VP
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDL-ALWIKECEKHGLVGDSEVPR 59
Query: 424 ILVGNK 441
IL+GNK
Sbjct: 60 ILIGNK 65
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 313 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 453
D D +L+ ++ D +S + + E + PN I +VG K D++
Sbjct: 97 DVDAVLLFYAADDLESFKQLKENLVHVQRKIPPNANITVVGTKADVK 143
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVEL 253
K+V++G+ GK+ LL F++++F PT+ + I V+GK V++
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKV 59
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 95 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
A++K KLV +G+ + GKT ++ F D F Y T+
Sbjct: 8 ALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATI 44
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKH-FCPNVPIILV 432
+WD GQE + Y TDV+++ + + E+ ++H I+++
Sbjct: 65 IWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVL 124
Query: 433 GNKKDL 450
NK+DL
Sbjct: 125 ANKQDL 130
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -2
Query: 669 HTYSREHLVFFFFLTCNAALVAVSNTSRTPSLLLAEHSRYANALIFSAI 523
HT+ ++L+ F +T + ++S + R P++ LAE N F+ +
Sbjct: 73 HTFRNDNLIHFVCMTTEDEIQSMSESLRMPNITLAESPSGTNKNNFANV 121
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -2
Query: 669 HTYSREHLVFFFFLTCNAALVAVSNTSRTPSLLLAEHSRYANALIFSAI 523
HT+ ++L+ F +T + ++S + R P++ LAE N F+ +
Sbjct: 73 HTFRNDNLIHFVCMTTEDEIQSMSESLRMPNITLAESPSGTNKNNFANV 121
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 WDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVG 435
WD GQE L Y D + ++ D + ++ + N+P+++
Sbjct: 74 WDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQNIPVLVAV 133
Query: 436 NKKDLRNDPATINELRKMKQE 498
NK ++ A E+R + ++
Sbjct: 134 NKSEMEG-AAAAAEVRMLLED 153
>AF040661-7|AAG24223.1| 439|Caenorhabditis elegans Hypothetical
protein W10G11.17 protein.
Length = 439
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 722 SYQAVCEPFINQSFPDNSTLT 660
S+ +CEPF Q PD STL+
Sbjct: 116 SFSPICEPFKEQLNPDESTLS 136
>U97003-6|AAB52273.1| 402|Caenorhabditis elegans Hypothetical
protein F47C10.8 protein.
Length = 402
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 657 REHLVFFFFLTCNAALVAVSNTSRTPSLLLAEHSRYANALI 535
+EH + F L CN A+ +S RT LL Y++AL+
Sbjct: 305 QEHALLNFLLFCNPAIHPLS--ERTRRLLATRQKSYSSALL 343
>U97003-4|AAB52268.2| 370|Caenorhabditis elegans Hypothetical
protein F47C10.3 protein.
Length = 370
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 678 RQQHTYSREHLVFFFFLTCNAALVAVSNTSRTPSLLLAEHSRYANALI 535
R+ S EH++ L CN+AL +S+ T L A Y++AL+
Sbjct: 266 RELKVSSEEHMLLNLILFCNSALHPLSD--ETKKTLSARQKVYSSALL 311
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 107 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 202
+LV +G+ + GKT L+ F D F Y T+
Sbjct: 12 ELVFLGEQSVGKTSLITRFMYDSFDNTYQATI 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,374,863
Number of Sequences: 27780
Number of extensions: 400765
Number of successful extensions: 1483
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -