Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0001
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058697-1|AAL13926.1|  412|Drosophila melanogaster LD41494p pro...    29   6.6  
AE014298-2355|AAN09391.1|  375|Drosophila melanogaster CG9911-PC...    29   6.6  
AE014298-2354|AAF48579.2|  412|Drosophila melanogaster CG9911-PD...    29   6.6  
AE014298-2353|AAN09390.1|  412|Drosophila melanogaster CG9911-PB...    29   6.6  
AE014298-2352|AAF48580.2|  412|Drosophila melanogaster CG9911-PA...    29   6.6  
AE014298-2111|AAF48430.1|  858|Drosophila melanogaster CG15028-P...    29   6.6  
AE014298-2110|AAN09656.1|  968|Drosophila melanogaster CG15028-P...    29   6.6  

>AY058697-1|AAL13926.1|  412|Drosophila melanogaster LD41494p
           protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = -2

Query: 565 TAKNIGMDVLNTK*KNVTLMGRHCRYKNILIWVFNFQRRKLKPESL*ALK*I--KKDCDI 392
           T+ NI M + + +   +      CR+ NIL  +F     K+K E   A K +  K DCD 
Sbjct: 39  TSDNIDMTLASNELVFLNFYAEWCRFSNILAPIFAEAADKIKEEFPEAGKVVLGKVDCDK 98

Query: 391 FPAVS*QRGKKAYGVLSSFENHEL 320
             A++ +     Y  L    N +L
Sbjct: 99  ETAIASRFHINKYPTLKIVRNGQL 122


>AE014298-2355|AAN09391.1|  375|Drosophila melanogaster CG9911-PC,
           isoform C protein.
          Length = 375

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = -2

Query: 565 TAKNIGMDVLNTK*KNVTLMGRHCRYKNILIWVFNFQRRKLKPESL*ALK*I--KKDCDI 392
           T+ NI M + + +   +      CR+ NIL  +F     K+K E   A K +  K DCD 
Sbjct: 2   TSDNIDMTLASNELVFLNFYAEWCRFSNILAPIFAEAADKIKEEFPEAGKVVLGKVDCDK 61

Query: 391 FPAVS*QRGKKAYGVLSSFENHEL 320
             A++ +     Y  L    N +L
Sbjct: 62  ETAIASRFHINKYPTLKIVRNGQL 85


>AE014298-2354|AAF48579.2|  412|Drosophila melanogaster CG9911-PD,
           isoform D protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = -2

Query: 565 TAKNIGMDVLNTK*KNVTLMGRHCRYKNILIWVFNFQRRKLKPESL*ALK*I--KKDCDI 392
           T+ NI M + + +   +      CR+ NIL  +F     K+K E   A K +  K DCD 
Sbjct: 39  TSDNIDMTLASNELVFLNFYAEWCRFSNILAPIFAEAADKIKEEFPEAGKVVLGKVDCDK 98

Query: 391 FPAVS*QRGKKAYGVLSSFENHEL 320
             A++ +     Y  L    N +L
Sbjct: 99  ETAIASRFHINKYPTLKIVRNGQL 122


>AE014298-2353|AAN09390.1|  412|Drosophila melanogaster CG9911-PB,
           isoform B protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = -2

Query: 565 TAKNIGMDVLNTK*KNVTLMGRHCRYKNILIWVFNFQRRKLKPESL*ALK*I--KKDCDI 392
           T+ NI M + + +   +      CR+ NIL  +F     K+K E   A K +  K DCD 
Sbjct: 39  TSDNIDMTLASNELVFLNFYAEWCRFSNILAPIFAEAADKIKEEFPEAGKVVLGKVDCDK 98

Query: 391 FPAVS*QRGKKAYGVLSSFENHEL 320
             A++ +     Y  L    N +L
Sbjct: 99  ETAIASRFHINKYPTLKIVRNGQL 122


>AE014298-2352|AAF48580.2|  412|Drosophila melanogaster CG9911-PA,
           isoform A protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = -2

Query: 565 TAKNIGMDVLNTK*KNVTLMGRHCRYKNILIWVFNFQRRKLKPESL*ALK*I--KKDCDI 392
           T+ NI M + + +   +      CR+ NIL  +F     K+K E   A K +  K DCD 
Sbjct: 39  TSDNIDMTLASNELVFLNFYAEWCRFSNILAPIFAEAADKIKEEFPEAGKVVLGKVDCDK 98

Query: 391 FPAVS*QRGKKAYGVLSSFENHEL 320
             A++ +     Y  L    N +L
Sbjct: 99  ETAIASRFHINKYPTLKIVRNGQL 122


>AE014298-2111|AAF48430.1|  858|Drosophila melanogaster CG15028-PA,
           isoform A protein.
          Length = 858

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 501 RPINVTFFYLVFSTSMPMFLAV*AASSHRQPPCMPVKTP 617
           RP N+ F   +FST+ PM   +    S R PP      P
Sbjct: 165 RPSNLAFLEAIFSTAPPMTTDLAGTKSTRTPPTPSTLAP 203


>AE014298-2110|AAN09656.1|  968|Drosophila melanogaster CG15028-PB,
           isoform B protein.
          Length = 968

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 501 RPINVTFFYLVFSTSMPMFLAV*AASSHRQPPCMPVKTP 617
           RP N+ F   +FST+ PM   +    S R PP      P
Sbjct: 275 RPSNLAFLEAIFSTAPPMTTDLAGTKSTRTPPTPSTLAP 313


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,165,637
Number of Sequences: 53049
Number of extensions: 608450
Number of successful extensions: 1000
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)