Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0095
(491 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 266 4e-72
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 266 4e-72
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 265 1e-71
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 265 1e-71
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 247 3e-66
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 247 3e-66
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 235 9e-63
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 132 9e-32
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 131 3e-31
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 129 9e-31
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 129 9e-31
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 128 2e-30
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 128 2e-30
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 127 4e-30
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 126 6e-30
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 123 8e-29
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 93 1e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 92 2e-19
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 0.97
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 1.7
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 1.7
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 5.2
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 5.2
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 5.2
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 5.2
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 6.9
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 27 6.9
At5g12120.1 68418.m01423 ubiquitin-associated (UBA)/TS-N domain-... 27 9.1
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 9.1
At3g19180.1 68416.m02435 cell division protein-related weak simi... 27 9.1
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 9.1
At1g18260.1 68414.m02277 suppressor of lin-12-like protein-relat... 27 9.1
At1g06470.2 68414.m00686 phosphate translocator-related low simi... 27 9.1
At1g06470.1 68414.m00685 phosphate translocator-related low simi... 27 9.1
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 266 bits (653), Expect = 4e-72
Identities = 116/140 (82%), Positives = 131/140 (93%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTV+DEVRTGTYRQLFHP QLI+GKEDAANN+ARGHYTIGKEI++L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 429 IIHKLTYQCTILQRFLIFHS 488
I KL CT LQ FL+F++
Sbjct: 121 RIRKLADNCTGLQGFLVFNA 140
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 266 bits (653), Expect = 4e-72
Identities = 116/140 (82%), Positives = 131/140 (93%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTV+DEVRTGTYRQLFHP QLI+GKEDAANN+ARGHYTIGKEI++L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 429 IIHKLTYQCTILQRFLIFHS 488
I KL CT LQ FL+F++
Sbjct: 121 RIRKLADNCTGLQGFLVFNA 140
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 265 bits (650), Expect = 1e-71
Identities = 116/140 (82%), Positives = 130/140 (92%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTV+DEVRTGTYRQLFHP QLI+GKEDAANN+ARGHYTIGKEI++L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 429 IIHKLTYQCTILQRFLIFHS 488
I KL CT LQ FL+F++
Sbjct: 121 RIRKLADNCTGLQGFLVFNA 140
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 265 bits (650), Expect = 1e-71
Identities = 116/140 (82%), Positives = 130/140 (92%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTV+DEVRTGTYRQLFHP QLI+GKEDAANN+ARGHYTIGKEI++L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 429 IIHKLTYQCTILQRFLIFHS 488
I KL CT LQ FL+F++
Sbjct: 121 RIRKLADNCTGLQGFLVFNA 140
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 247 bits (605), Expect = 3e-66
Identities = 107/140 (76%), Positives = 125/140 (89%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTV+DEVRTGTYRQLFHP QLI+GKEDAANN+ARGHYT+GKEI++L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 429 IIHKLTYQCTILQRFLIFHS 488
+ KL CT LQ FL+F++
Sbjct: 121 RVRKLADNCTGLQGFLVFNA 140
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 247 bits (605), Expect = 3e-66
Identities = 107/140 (76%), Positives = 125/140 (89%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVFVDLEPTV+DEVRTGTYRQLFHP QLI+GKEDAANN+ARGHYT+GKEI++L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 429 IIHKLTYQCTILQRFLIFHS 488
+ KL CT LQ FL+F++
Sbjct: 121 RVRKLADNCTGLQGFLVFNA 140
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 235 bits (576), Expect = 9e-63
Identities = 100/140 (71%), Positives = 123/140 (87%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
HVPRAVF+DLEPTV+DEVRTGTYRQLFHP QLI+GKEDAANN+ARGHYT+G+EI++ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 429 IIHKLTYQCTILQRFLIFHS 488
+ KL CT LQ FL+F++
Sbjct: 121 RLRKLADNCTGLQGFLVFNA 140
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 132 bits (320), Expect = 9e-32
Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 239
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 240 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNL 419
G++VPRA+ +DLEP +D VRTG Y Q+F P + G+ A NN+A+GHYT G E+++
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 420 VLDIIHKLTYQCTILQRFLIFHS 488
VLD++ K C LQ F + HS
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHS 138
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 131 bits (316), Expect = 3e-31
Identities = 59/140 (42%), Positives = 85/140 (60%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
+VPRAV +DLEP +D +R+G Y Q+F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C LQ F + HS
Sbjct: 120 VVRKEAENCDCLQGFQVCHS 139
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 129 bits (312), Expect = 9e-31
Identities = 59/140 (42%), Positives = 83/140 (59%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
VPRAV +DLEP +D +R+G Y Q F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C LQ F + HS
Sbjct: 119 VVRKEAENCDCLQGFQVCHS 138
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 129 bits (312), Expect = 9e-31
Identities = 59/140 (42%), Positives = 83/140 (59%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
VPRAV +DLEP +D +R+G Y Q F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C LQ F + HS
Sbjct: 119 VVRKEAENCDCLQGFQVCHS 138
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 128 bits (310), Expect = 2e-30
Identities = 60/140 (42%), Positives = 84/140 (60%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
+VPRAV +DLEP +D +R+G + Q+F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C LQ F + HS
Sbjct: 119 VVRKEAENCDCLQGFQVCHS 138
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 128 bits (309), Expect = 2e-30
Identities = 58/140 (41%), Positives = 85/140 (60%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
+VPRAV +DLEP +D +R+G + Q+F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C LQ F + HS
Sbjct: 120 VVRKEAENCDCLQGFQVCHS 139
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 127 bits (307), Expect = 4e-30
Identities = 59/140 (42%), Positives = 85/140 (60%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
+VPRAV +DLEP +D VR+G Y Q+F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C LQ F + HS
Sbjct: 119 VVRKEAENCDCLQGFQVCHS 138
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 126 bits (305), Expect = 6e-30
Identities = 58/140 (41%), Positives = 83/140 (59%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
VPRAV +DLEP +D VR+G Y Q+F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K C LQ F + HS
Sbjct: 119 VVRKEAENCDCLQGFQVCHS 138
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 123 bits (296), Expect = 8e-29
Identities = 58/140 (41%), Positives = 83/140 (59%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKEDAANNYARGHYTIGKEILNLVLD 428
+VPRAV +DLEP +D +R+G + Q+F P + G+ A NN+A+GHYT G E+++ VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 429 IIHKLTYQCTILQRFLIFHS 488
++ K LQ F + HS
Sbjct: 119 VVRKEAENSDCLQGFQVCHS 138
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 92.7 bits (220), Expect = 1e-19
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKE--DAANNYARGHYTIGKEILNLVL 425
+PRA+ +DLEP V++ ++ G YR L++ + A NN+A G++ GK + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 426 DIIHKLTYQCTILQRFLIFHS 488
D+I + L+ F++ HS
Sbjct: 120 DMIDREADGSDSLEGFVLCHS 140
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 92.3 bits (219), Expect = 2e-19
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPXQLITGKE--DAANNYARGHYTIGKEILNLVL 425
+PRA+ +DLEP V++ ++ G YR L++ + A NN+A G++ GK + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 426 DIIHKLTYQCTILQRFLIFHS 488
D+I + L+ F++ HS
Sbjct: 120 DMIDREADGSDSLEGFVLCHS 140
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 0.97
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 147 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 296
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 238 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 113
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -1
Query: 275 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 105
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 104 G-LANVYRDALTHF 66
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 5.2
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 275 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 96
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 95 NVYRDALTHFD 63
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 5.2
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 275 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 96
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 95 NVYRDALTHFD 63
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 5.2
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 275 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 96
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 95 NVYRDALTHFD 63
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 5.2
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 275 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 96
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 95 NVYRDALTHFD 63
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 180 WASGHQAGCRAPGSKAPSRHYRSGLR 103
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 278 KIDEDSTGYVLASSGLAEESVERIVSTPD 192
+++ DS+GYVL G + SVE + + D
Sbjct: 336 QVELDSSGYVLVREGTSNTSVEGVFAAGD 364
>At5g12120.1 68418.m01423 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 619
Score = 26.6 bits (56), Expect = 9.1
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Frame = -1
Query: 332 MKQLSVCASADLINNSRFK-IDE-DSTGYVLAS-------SGLAEESVERIVST 198
++ LS S+ L NN RF+ IDE DSTG S SG +E+ E++ ST
Sbjct: 49 IESLSATGSSSLHNNGRFRHIDESDSTGADCDSVSNNGSWSGESEDHKEKVPST 102
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 26.6 bits (56), Expect = 9.1
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 438 CGLCPKPNLGFPFQWCSDHGHSCWPHLPYQ 349
C + P PN PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At3g19180.1 68416.m02435 cell division protein-related weak
similarity to cell division protein Ftn2 [Synechococcus
sp. PCC 7942] GI:16226084
Length = 819
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 52 KKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTR 189
K+L+S SA ++ ESRS S AW S++A P TR
Sbjct: 427 KQLESNSDSAVRNSILGKESRSTSATPSLEAWL-MESVLANFPDTR 471
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 26.6 bits (56), Expect = 9.1
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 438 CGLCPKPNLGFPFQWCSDHGHSCWPHLPYQ 349
C + P PN PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
>At1g18260.1 68414.m02277 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 678
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 204 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHP 335
+D N+ + G G+ F + EP +E+ G++R +F P
Sbjct: 34 NDDLNSGGDDNGVGESSDFDEFGESEPKSEEELDPGSWRSIFEP 77
>At1g06470.2 68414.m00686 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 305 HWHIQTVVSSXTTYYW*GR 361
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
>At1g06470.1 68414.m00685 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 305 HWHIQTVVSSXTTYYW*GR 361
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,353,141
Number of Sequences: 28952
Number of extensions: 248469
Number of successful extensions: 793
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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