Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0094
(1287 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336... 338 4e-93
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364... 338 4e-93
05_05_0046 - 21834942-21835055,21835145-21835220,21835297-218355... 32 1.1
04_04_1328 - 32682087-32682200,32682290-32682365,32682442-326826... 32 1.1
04_03_0541 - 16934460-16934573,16934663-16934738,16934815-169350... 32 1.1
02_04_0664 + 24826714-24826842,24826912-24826947,24827551-248276... 32 1.1
01_06_1351 - 36510599-36510712,36510802-36510877,36510954-365112... 32 1.1
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 31 2.6
08_02_1351 + 26318023-26318665,26319386-26319543,26320843-263209... 29 6.0
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 29 6.0
07_03_0521 + 19016824-19017000,19017064-19017099,19017860-190186... 29 6.0
01_06_0147 + 26997641-26997688,26997783-26997857,26997966-269980... 29 6.0
>06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,
3363820-3364098,3364189-3364386,3364475-3365110,
3365209-3365463,3365579-3365685,3365770-3369566,
3369677-3370166,3370918-3371308,3371481-3371573,
3371687-3371810,3372544-3372791
Length = 2380
Score = 338 bits (832), Expect = 4e-93
Identities = 145/224 (64%), Positives = 173/224 (77%)
Frame = -2
Query: 815 KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636
K + I LR QIA +LYG SP DNP +E+ C +PPQ GTHQ V LP +LP+H L L
Sbjct: 2128 KFICIADLRTQIAGFLYGLSPQDNPQVKEIRCIAIPPQHGTHQMVTLPANLPEHEFLNDL 2187
Query: 635 QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456
+PLGWMHTQPNE PQLSPQD+T+HAKI+ +N WDGEK II+TCSFTPGSCSLTAYKLTP
Sbjct: 2188 EPLGWMHTQPNEAPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTP 2247
Query: 455 SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276
SGYEWG N D G+NP GYLP+HYE+VQMLLSDRFLG++MVP WN+NFMGV+HDP M
Sbjct: 2248 SGYEWGRSNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNTPWNFNFMGVKHDPLM 2307
Query: 275 KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLF 144
KY ++LG PR+FYHE HRP HF+ F+ +++ DRED F
Sbjct: 2308 KYNMKLGTPRDFYHEDHRPTHFLEFSNIDE--GEVAEGDREDTF 2349
>05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,
3645328-3645525,3645614-3646249,3646352-3646606,
3646718-3646824,3646909-3650705,3650816-3651305,
3652043-3652433,3652621-3652713,3652818-3652941,
3653871-3654118
Length = 2350
Score = 338 bits (832), Expect = 4e-93
Identities = 145/224 (64%), Positives = 173/224 (77%)
Frame = -2
Query: 815 KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636
K + I LR QIA +LYG SP DNP +E+ C +PPQ GTHQ V LP +LP+H L L
Sbjct: 2128 KFICIADLRTQIAGFLYGLSPQDNPQVKEIRCIAIPPQHGTHQMVTLPANLPEHEFLNDL 2187
Query: 635 QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456
+PLGWMHTQPNE PQLSPQD+T+HAKI+ +N WDGEK II+TCSFTPGSCSLTAYKLTP
Sbjct: 2188 EPLGWMHTQPNEAPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTP 2247
Query: 455 SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276
SGYEWG N D G+NP GYLP+HYE+VQMLLSDRFLG++MVP WN+NFMGV+HDP M
Sbjct: 2248 SGYEWGRSNKDSGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNTPWNFNFMGVKHDPLM 2307
Query: 275 KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLF 144
KY ++LG PR+FYHE HRP HF+ F+ +++ DRED F
Sbjct: 2308 KYNMKLGTPRDFYHEDHRPTHFLEFSNIDE--GEVAEGDREDTF 2349
>05_05_0046 -
21834942-21835055,21835145-21835220,21835297-21835553,
21835643-21835741,21835820-21836018,21836102-21836315,
21836470-21836538,21836626-21836950,21837065-21837235,
21837315-21837479,21837555-21838191,21838258-21838319,
21838581-21838652,21839256-21839291,21839361-21839489
Length = 874
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -2
Query: 314 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 135
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 678 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 728
Query: 134 *PRSIFHCVSLYVV-IEKKDPRPPNSCSPGDPL 39
P +F+ LYV +E K +S + DPL
Sbjct: 729 IPVHLFNHYVLYVFNMESKKLSVLDSLNTEDPL 761
>04_04_1328 -
32682087-32682200,32682290-32682365,32682442-32682698,
32682788-32682886,32682965-32683163,32683247-32683460,
32683615-32683683,32683772-32684096,32684211-32684381,
32684461-32684625,32684701-32684814,32685228-32685336,
32685403-32685464,32685726-32685797,32686401-32686436,
32686506-32686634
Length = 736
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -2
Query: 314 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 135
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 540 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 590
Query: 134 *PRSIFHCVSLYVV-IEKKDPRPPNSCSPGDPL 39
P +F+ LYV +E K +S + DPL
Sbjct: 591 IPVHLFNHYVLYVFNMESKKLSVLDSLNTEDPL 623
>04_03_0541 -
16934460-16934573,16934663-16934738,16934815-16935071,
16935161-16935259,16935338-16935536,16935620-16935833,
16935988-16936056,16936144-16936468,16936583-16936753,
16936833-16936997,16937073-16937709,16937776-16937837,
16938098-16938169,16938689-16938724,16938794-16938922
Length = 874
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -2
Query: 314 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 135
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 678 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 728
Query: 134 *PRSIFHCVSLYVV-IEKKDPRPPNSCSPGDPL 39
P +F+ LYV +E K +S + DPL
Sbjct: 729 IPVHLFNHYVLYVFNMESKKLSVLDSLNTEDPL 761
>02_04_0664 +
24826714-24826842,24826912-24826947,24827551-24827622,
24827882-24827943,24828010-24828646,24828722-24828886,
24828966-24829136,24829251-24829575,24829663-24829731,
24829886-24830099,24830183-24830381,24830460-24830558,
24830648-24830904,24830981-24831056,24831146-24831259
Length = 874
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -2
Query: 314 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 135
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 678 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 728
Query: 134 *PRSIFHCVSLYVV-IEKKDPRPPNSCSPGDPL 39
P +F+ LYV +E K +S + DPL
Sbjct: 729 IPVHLFNHYVLYVFNMESKKLSVLDSLNTEDPL 761
>01_06_1351 -
36510599-36510712,36510802-36510877,36510954-36511210,
36511300-36511398,36511477-36511675,36511759-36511972,
36512127-36512195,36512283-36512607,36512722-36512892,
36512972-36513136,36513212-36513848,36513915-36513976,
36514237-36514308,36514912-36514947,36515017-36515145
Length = 874
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -2
Query: 314 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 135
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 678 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 728
Query: 134 *PRSIFHCVSLYVV-IEKKDPRPPNSCSPGDPL 39
P +F+ LYV +E K +S + DPL
Sbjct: 729 IPVHLFNHYVLYVFNMESKKLSVLDSLNTEDPL 761
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 30.7 bits (66), Expect = 2.6
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 96 NIK*NTMKNASRLNLCEQVFSVGGDCWRCSIFHSSKVHEMRRSVNLVVELARVAELHTV 272
N K NT+K+ N CE S+GG+ I + E RSV V+E V++ +
Sbjct: 4318 NGKSNTLKDQKENNTCEYTDSIGGEVNLLVIDENLVTFEEERSVLEVIESFSVSDAELI 4376
>08_02_1351 +
26318023-26318665,26319386-26319543,26320843-26320930,
26321953-26322185
Length = 373
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 647 ERDVLAGVSADVLVDVCPTGEAVPHSALHVPL 742
E+DV++ V A VL D+C GE +P + LH L
Sbjct: 238 EKDVVSSV-ATVLSDLCGPGEWMPMAKLHTEL 268
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 714 TASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT**VAPAIASGYHYTCQNH 553
++S +S+ST++ T S SST + H T P++ASG+H ++
Sbjct: 44 SSSSSSSSSSSTNSPTATAASSSSTNTSGAAIVHPTTSSHPSVASGHHSAANSY 97
>07_03_0521 +
19016824-19017000,19017064-19017099,19017860-19018624,
19018772-19018864,19018944-19019114,19019206-19019397,
19019443-19019530,19019617-19019685,19019841-19020054,
19020136-19020334,19020406-19020504,19020594-19020850,
19020927-19021002,19021091-19021204
Length = 849
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 314 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHF 210
N N++G RH N +G+ EF+ H+ AHF
Sbjct: 653 NTNYLGWRHFINQDFGMYAVAGDEFWEASHQLAHF 687
>01_06_0147 +
26997641-26997688,26997783-26997857,26997966-26998052,
26998566-26998622,26998867-26998959,26999528-26999600,
26999830-26999905,27000217-27000280,27000951-27000980,
27001251-27001367,27002742-27002782,27002870-27003176,
27003279-27003368,27003479-27003541,27003678-27003752,
27003922-27003984,27004714-27004784,27004885-27005068
Length = 537
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = -2
Query: 776 CYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAH--LQPLGWMHTQPN 603
C + G S D V ++P Q T H L+ L P GW+HT P+
Sbjct: 379 CGILGASFRDGTYY--VTMLIIPKQEATAHSCQAVSEEEIHAILSEQSLYPAGWIHTHPS 436
Query: 602 ELPQLSPQDITT 567
+ LS D+ T
Sbjct: 437 QTCFLSSIDLHT 448
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,612,903
Number of Sequences: 37544
Number of extensions: 553758
Number of successful extensions: 1721
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4004040288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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