SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0094
         (1287 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processin...   392   e-108
AK222905-1|BAD96625.1|  398|Homo sapiens U5 snRNP-specific prote...   392   e-108
AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8 pr...   392   e-108
AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein.        392   e-108
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio...    32   5.2  
AY358239-1|AAQ88606.1|  102|Homo sapiens KLIA6249 protein.             32   5.2  
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ...    32   5.2  
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio...    32   5.2  
X59350-1|CAA42006.1|  847|Homo sapiens B Cell membrane protein C...    31   6.9  
U62631-1|AAB06448.1|  847|Homo sapiens B-cell receptor CD22-B is...    31   6.9  
S61375-1|AAC18956.1|  662|Homo sapiens CD22 protein protein.           31   6.9  
EF064756-1|ABK41939.1|  847|Homo sapiens CD22 molecule protein.        31   6.9  
BC109306-1|AAI09307.1|  675|Homo sapiens CD22 protein protein.         31   6.9  
AB253795-1|BAF32758.1|  847|Homo sapiens CD22 antigen protein.         31   6.9  
AB253794-1|BAF32757.1|  847|Homo sapiens CD22 antigen protein.         31   6.9  
AB253793-1|BAF32756.1|  847|Homo sapiens CD22 antigen protein.         31   6.9  
Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease...    31   9.1  
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.               31   9.1  
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea...    31   9.1  
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea...    31   9.1  
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea...    31   9.1  

>BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processing
            factor 8 homolog (S. cerevisiae) protein.
          Length = 2335

 Score =  392 bits (965), Expect = e-108
 Identities = 169/225 (75%), Positives = 193/225 (85%)
 Frame = -2

Query: 815  KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636
            K + I  LRAQIA YLYG SP DNP  +E+ C V+ PQWGTHQ VHLP  LP+H  L  +
Sbjct: 2113 KFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEM 2172

Query: 635  QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456
            +PLGW+HTQPNE PQLSPQD+TTHAKIM+DN SWDGEKTIIITCSFTPGSC+LTAYKLTP
Sbjct: 2173 EPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTP 2232

Query: 455  SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276
            SGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNYNFMGVRHDPNM
Sbjct: 2233 SGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNM 2292

Query: 275  KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 141
            KY +QL NP+EFYHEVHRP+HF+NFA +++      +ADREDL+A
Sbjct: 2293 KYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335


>AK222905-1|BAD96625.1|  398|Homo sapiens U5 snRNP-specific protein
           variant protein.
          Length = 398

 Score =  392 bits (965), Expect = e-108
 Identities = 169/225 (75%), Positives = 193/225 (85%)
 Frame = -2

Query: 815 KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636
           K + I  LRAQIA YLYG SP DNP  +E+ C V+ PQWGTHQ VHLP  LP+H  L  +
Sbjct: 176 KFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEM 235

Query: 635 QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456
           +PLGW+HTQPNE PQLSPQD+TTHAKIM+DN SWDGEKTIIITCSFTPGSC+LTAYKLTP
Sbjct: 236 EPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTP 295

Query: 455 SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276
           SGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNYNFMGVRHDPNM
Sbjct: 296 SGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNM 355

Query: 275 KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 141
           KY +QL NP+EFYHEVHRP+HF+NFA +++      +ADREDL+A
Sbjct: 356 KYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 398


>AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8
            protein.
          Length = 2335

 Score =  392 bits (965), Expect = e-108
 Identities = 169/225 (75%), Positives = 193/225 (85%)
 Frame = -2

Query: 815  KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636
            K + I  LRAQIA YLYG SP DNP  +E+ C V+ PQWGTHQ VHLP  LP+H  L  +
Sbjct: 2113 KFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEM 2172

Query: 635  QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456
            +PLGW+HTQPNE PQLSPQD+TTHAKIM+DN SWDGEKTIIITCSFTPGSC+LTAYKLTP
Sbjct: 2173 EPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTP 2232

Query: 455  SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276
            SGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNYNFMGVRHDPNM
Sbjct: 2233 SGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNM 2292

Query: 275  KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 141
            KY +QL NP+EFYHEVHRP+HF+NFA +++      +ADREDL+A
Sbjct: 2293 KYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335


>AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein.
          Length = 2335

 Score =  392 bits (965), Expect = e-108
 Identities = 169/225 (75%), Positives = 193/225 (85%)
 Frame = -2

Query: 815  KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636
            K + I  LRAQIA YLYG SP DNP  +E+ C V+ PQWGTHQ VHLP  LP+H  L  +
Sbjct: 2113 KFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEM 2172

Query: 635  QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456
            +PLGW+HTQPNE PQLSPQD+TTHAKIM+DN SWDGEKTIIITCSFTPGSC+LTAYKLTP
Sbjct: 2173 EPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTP 2232

Query: 455  SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276
            SGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNYNFMGVRHDPNM
Sbjct: 2233 SGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNM 2292

Query: 275  KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 141
            KY +QL NP+EFYHEVHRP+HF+NFA +++      +ADREDL+A
Sbjct: 2293 KYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335


>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
           regulator 1 protein.
          Length = 1077

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -1

Query: 714 TASPVGHTSTSTSAETPAKTSRSSTPAT 631
           T+SP    STSTS+ TP+ T+ ++T AT
Sbjct: 263 TSSPAPAVSTSTSSSTPSSTTSTTTTAT 290


>AY358239-1|AAQ88606.1|  102|Homo sapiens KLIA6249 protein.
          Length = 102

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 723 LCGTASPVGHTSTSTSAETPAKTSRSSTPATP 628
           +C   +PV  T T T AETPA+T   +   TP
Sbjct: 17  VCAQDAPVEETPTETPAETPAETPAETPAETP 48


>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
           factor CA150 protein.
          Length = 1098

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -1

Query: 714 TASPVGHTSTSTSAETPAKTSRSSTPAT 631
           T+SP    STSTS+ TP+ T+ ++T AT
Sbjct: 263 TSSPAPAVSTSTSSSTPSSTTSTTTTAT 290


>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
           regulator 1 variant protein.
          Length = 1081

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -1

Query: 714 TASPVGHTSTSTSAETPAKTSRSSTPAT 631
           T+SP    STSTS+ TP+ T+ ++T AT
Sbjct: 267 TSSPAPAVSTSTSSSTPSSTTSTTTTAT 294


>X59350-1|CAA42006.1|  847|Homo sapiens B Cell membrane protein CD22
           protein.
          Length = 847

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = -2

Query: 704 QWGTHQQVHLPKHLPKHP---ALAHLQPLGWMHTQPN-ELP-QLSPQDITTHAKIMSDNS 540
           Q  T ++VH+PK LP H    +      LG     P  EL  Q  P+ +TT   I +   
Sbjct: 374 QGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTT--VIQNPMP 431

Query: 539 SWDGEKTIIITCSFTPGSCSLTAYKLTPSG 450
             +G+ T+ ++C++   + S+T Y+  P G
Sbjct: 432 IREGD-TVTLSCNYNSSNPSVTRYEWKPHG 460


>U62631-1|AAB06448.1|  847|Homo sapiens B-cell receptor CD22-B
           isoform protein.
          Length = 847

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = -2

Query: 704 QWGTHQQVHLPKHLPKHP---ALAHLQPLGWMHTQPN-ELP-QLSPQDITTHAKIMSDNS 540
           Q  T ++VH+PK LP H    +      LG     P  EL  Q  P+ +TT   I +   
Sbjct: 374 QGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTT--VIQNPMP 431

Query: 539 SWDGEKTIIITCSFTPGSCSLTAYKLTPSG 450
             +G+ T+ ++C++   + S+T Y+  P G
Sbjct: 432 IREGD-TVTLSCNYNSSNPSVTRYEWKPHG 460


>S61375-1|AAC18956.1|  662|Homo sapiens CD22 protein protein.
          Length = 662

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = -2

Query: 704 QWGTHQQVHLPKHLPKHP---ALAHLQPLGWMHTQPN-ELP-QLSPQDITTHAKIMSDNS 540
           Q  T ++VH+PK LP H    +      LG     P  EL  Q  P+ +TT   I +   
Sbjct: 254 QGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTT--VIQNPMP 311

Query: 539 SWDGEKTIIITCSFTPGSCSLTAYKLTPSG 450
             +G+ T+ ++C++   + S+T Y+  P G
Sbjct: 312 IREGD-TVTLSCNYNSSNPSVTRYEWKPHG 340


>EF064756-1|ABK41939.1|  847|Homo sapiens CD22 molecule protein.
          Length = 847

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = -2

Query: 704 QWGTHQQVHLPKHLPKHP---ALAHLQPLGWMHTQPN-ELP-QLSPQDITTHAKIMSDNS 540
           Q  T ++VH+PK LP H    +      LG     P  EL  Q  P+ +TT   I +   
Sbjct: 374 QGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTT--VIQNPMP 431

Query: 539 SWDGEKTIIITCSFTPGSCSLTAYKLTPSG 450
             +G+ T+ ++C++   + S+T Y+  P G
Sbjct: 432 IREGD-TVTLSCNYNSSNPSVTRYEWKPHG 460


>BC109306-1|AAI09307.1|  675|Homo sapiens CD22 protein protein.
          Length = 675

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = -2

Query: 704 QWGTHQQVHLPKHLPKHP---ALAHLQPLGWMHTQPN-ELP-QLSPQDITTHAKIMSDNS 540
           Q  T ++VH+PK LP H    +      LG     P  EL  Q  P+ +TT   I +   
Sbjct: 202 QGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTT--VIQNPMP 259

Query: 539 SWDGEKTIIITCSFTPGSCSLTAYKLTPSG 450
             +G+ T+ ++C++   + S+T Y+  P G
Sbjct: 260 IREGD-TVTLSCNYNSSNPSVTRYEWKPHG 288


>AB253795-1|BAF32758.1|  847|Homo sapiens CD22 antigen protein.
          Length = 847

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = -2

Query: 704 QWGTHQQVHLPKHLPKHP---ALAHLQPLGWMHTQPN-ELP-QLSPQDITTHAKIMSDNS 540
           Q  T ++VH+PK LP H    +      LG     P  EL  Q  P+ +TT   I +   
Sbjct: 374 QGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTT--VIQNPMP 431

Query: 539 SWDGEKTIIITCSFTPGSCSLTAYKLTPSG 450
             +G+ T+ ++C++   + S+T Y+  P G
Sbjct: 432 IREGD-TVTLSCNYNSSNPSVTRYEWKPHG 460


>AB253794-1|BAF32757.1|  847|Homo sapiens CD22 antigen protein.
          Length = 847

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = -2

Query: 704 QWGTHQQVHLPKHLPKHP---ALAHLQPLGWMHTQPN-ELP-QLSPQDITTHAKIMSDNS 540
           Q  T ++VH+PK LP H    +      LG     P  EL  Q  P+ +TT   I +   
Sbjct: 374 QGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTT--VIQNPMP 431

Query: 539 SWDGEKTIIITCSFTPGSCSLTAYKLTPSG 450
             +G+ T+ ++C++   + S+T Y+  P G
Sbjct: 432 IREGD-TVTLSCNYNSSNPSVTRYEWKPHG 460


>AB253793-1|BAF32756.1|  847|Homo sapiens CD22 antigen protein.
          Length = 847

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = -2

Query: 704 QWGTHQQVHLPKHLPKHP---ALAHLQPLGWMHTQPN-ELP-QLSPQDITTHAKIMSDNS 540
           Q  T ++VH+PK LP H    +      LG     P  EL  Q  P+ +TT   I +   
Sbjct: 374 QGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTT--VIQNPMP 431

Query: 539 SWDGEKTIIITCSFTPGSCSLTAYKLTPSG 450
             +G+ T+ ++C++   + S+T Y+  P G
Sbjct: 432 IREGD-TVTLSCNYNSSNPSVTRYEWKPHG 460


>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = -2

Query: 614 TQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGV 435
           TQP +LPQL  ++      I +++  W G      T S T G+  +   K + + Y W V
Sbjct: 274 TQPLDLPQLEIRNSPLFIHIPNNSLQW-GVYVFNFTVSITTGNPKMPEVKDSDAVYVWIV 332

Query: 434 RNT 426
           R++
Sbjct: 333 RSS 335


>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
          Length = 2255

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = -2

Query: 614 TQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGV 435
           TQP +LPQL  ++      I +++  W G      T S T G+  +   K + + Y W V
Sbjct: 274 TQPLDLPQLEIRNSPLFIHIPNNSLQW-GVYVFNFTVSITTGNPKMPEVKDSDAVYVWIV 332

Query: 434 RNT 426
           R++
Sbjct: 333 RSS 335


>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = -2

Query: 614 TQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGV 435
           TQP +LPQL  ++      I +++  W G      T S T G+  +   K + + Y W V
Sbjct: 274 TQPLDLPQLEIRNSPLFIHIPNNSLQW-GVYVFNFTVSITTGNPKMPEVKDSDAVYVWIV 332

Query: 434 RNT 426
           R++
Sbjct: 333 RSS 335


>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = -2

Query: 614 TQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGV 435
           TQP +LPQL  ++      I +++  W G      T S T G+  +   K + + Y W V
Sbjct: 274 TQPLDLPQLEIRNSPLFIHIPNNSLQW-GVYVFNFTVSITTGNPKMPEVKDSDAVYVWIV 332

Query: 434 RNT 426
           R++
Sbjct: 333 RSS 335


>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
           and receptor for egg jelly related protein protein.
          Length = 2253

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = -2

Query: 614 TQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGV 435
           TQP +LPQL  ++      I +++  W G      T S T G+  +   K + + Y W V
Sbjct: 274 TQPLDLPQLEIRNSPLFIHIPNNSLQW-GVYVFNFTVSITTGNPKMPEVKDSDAVYVWIV 332

Query: 434 RNT 426
           R++
Sbjct: 333 RSS 335


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,099,052
Number of Sequences: 237096
Number of extensions: 3095954
Number of successful extensions: 9052
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9036
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18495533280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -