BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0094
(1287 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051826-1|AAK93250.1| 1328|Drosophila melanogaster LD33339p pro... 384 e-106
AE013599-1403|AAF58573.1| 2396|Drosophila melanogaster CG8877-PA... 384 e-106
AY060815-1|AAL28363.1| 873|Drosophila melanogaster GH28601p pro... 33 0.85
AE014298-804|AAF46090.2| 873|Drosophila melanogaster CG15765-PA... 33 0.85
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 33 1.1
AF023478-1|AAB87873.1| 850|Drosophila melanogaster GTPase activ... 32 1.5
AE014134-1295|AAF52526.1| 850|Drosophila melanogaster CG33529-P... 32 1.5
AE014134-1294|AAX52662.1| 876|Drosophila melanogaster CG33529-P... 32 1.5
AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-P... 32 1.5
AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-P... 32 1.5
BT021470-1|AAX33618.1| 675|Drosophila melanogaster AT09010p pro... 31 3.4
AY069105-1|AAL39250.1| 573|Drosophila melanogaster GH12359p pro... 31 4.5
AE014297-4292|AAO41611.2| 904|Drosophila melanogaster CG33204-P... 30 7.9
AE014134-1817|ABC65890.1| 281|Drosophila melanogaster CG34043-P... 30 7.9
>AY051826-1|AAK93250.1| 1328|Drosophila melanogaster LD33339p protein.
Length = 1328
Score = 384 bits (945), Expect = e-106
Identities = 165/225 (73%), Positives = 192/225 (85%)
Frame = -2
Query: 815 KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636
K VTI LRAQIA YLYG SP DNP +E+ C V+PPQWGTHQ ++LP LP H L +
Sbjct: 1105 KFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINLPNTLPTHQYLKDM 1164
Query: 635 QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456
+PLGW+HTQPNELPQLSPQDITTHAKIM +NS+WDGEKTI+ITCSFTPGSCSLTAYKLTP
Sbjct: 1165 EPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFTPGSCSLTAYKLTP 1224
Query: 455 SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276
SG+EWG +NTD+GNNPKGYLPSHYERVQMLLS++FLG+FMVP+Q SWNYNFMGVRHDPNM
Sbjct: 1225 SGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSWNYNFMGVRHDPNM 1284
Query: 275 KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 141
KY +QL NP+EFYHE+HR +HF+ F+ +ED ADRED++A
Sbjct: 1285 KYELQLANPKEFYHELHRTSHFLLFSNLED-GGDGAGADREDVYA 1328
>AE013599-1403|AAF58573.1| 2396|Drosophila melanogaster CG8877-PA
protein.
Length = 2396
Score = 384 bits (945), Expect = e-106
Identities = 165/225 (73%), Positives = 192/225 (85%)
Frame = -2
Query: 815 KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636
K VTI LRAQIA YLYG SP DNP +E+ C V+PPQWGTHQ ++LP LP H L +
Sbjct: 2173 KFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINLPNTLPTHQYLKDM 2232
Query: 635 QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456
+PLGW+HTQPNELPQLSPQDITTHAKIM +NS+WDGEKTI+ITCSFTPGSCSLTAYKLTP
Sbjct: 2233 EPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFTPGSCSLTAYKLTP 2292
Query: 455 SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276
SG+EWG +NTD+GNNPKGYLPSHYERVQMLLS++FLG+FMVP+Q SWNYNFMGVRHDPNM
Sbjct: 2293 SGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSWNYNFMGVRHDPNM 2352
Query: 275 KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 141
KY +QL NP+EFYHE+HR +HF+ F+ +ED ADRED++A
Sbjct: 2353 KYELQLANPKEFYHELHRTSHFLLFSNLED-GGDGAGADREDVYA 2396
>AY060815-1|AAL28363.1| 873|Drosophila melanogaster GH28601p
protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 729 SALCGTASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT 607
+A A+ G T+ +TSAETP T+ ++ AT +H T
Sbjct: 539 AAAAAAAAATGTTTVATSAETPTTTTSTAAAATATTTSHAT 579
>AE014298-804|AAF46090.2| 873|Drosophila melanogaster CG15765-PA
protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.85
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 729 SALCGTASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT 607
+A A+ G T+ +TSAETP T+ ++ AT +H T
Sbjct: 539 AAAAAAAAATGTTTVATSAETPTTTTSTAAAATATTTSHAT 579
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 32.7 bits (71), Expect = 1.1
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 32 LELVDPPGCRNSA 70
LELVDPPGCRNSA
Sbjct: 10 LELVDPPGCRNSA 22
>AF023478-1|AAB87873.1| 850|Drosophila melanogaster GTPase
activating protein for Rap1 protein.
Length = 850
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -1
Query: 717 GTASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT**VAPAIASGYHYTCQNHV 550
G+ + + H+ +S+ T + ++ SSTPA+P + + +++G+HY Q+ V
Sbjct: 100 GSRATLRHSMNHSSSSTVSGSACSSTPASPQLSGVVSASGCQLLSNGHHYQSQSSV 155
>AE014134-1295|AAF52526.1| 850|Drosophila melanogaster CG33529-PA,
isoform A protein.
Length = 850
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -1
Query: 717 GTASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT**VAPAIASGYHYTCQNHV 550
G+ + + H+ +S+ T + ++ SSTPA+P + + +++G+HY Q+ V
Sbjct: 100 GSRATLRHSMNHSSSSTVSGSACSSTPASPQLSGVVSASGCQLLSNGHHYQSQSSV 155
>AE014134-1294|AAX52662.1| 876|Drosophila melanogaster CG33529-PB,
isoform B protein.
Length = 876
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = -1
Query: 717 GTASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT**VAPAIASGYHYTCQNHV 550
G+ + + H+ +S+ T + ++ SSTPA+P + + +++G+HY Q+ V
Sbjct: 126 GSRATLRHSMNHSSSSTVSGSACSSTPASPQLSGVVSASGCQLLSNGHHYQSQSSV 181
>AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-PA
protein.
Length = 157
Score = 32.3 bits (70), Expect = 1.5
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -1
Query: 744 SNGT*SALCGTASPVGHTSTSTSAETPAKTSRSS-TPATPWMDAHTT**VAPAIAS 580
S+ T S+ T++P +++TSTS+ TP+ +S +S T +T A TT AP+ +S
Sbjct: 47 SSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTT---APSTSS 99
>AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-PA
protein.
Length = 157
Score = 32.3 bits (70), Expect = 1.5
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -1
Query: 744 SNGT*SALCGTASPVGHTSTSTSAETPAKTSRSS-TPATPWMDAHTT**VAPAIAS 580
S+ T S+ T++P +++TSTS+ TP+ +S +S T +T A TT AP+ +S
Sbjct: 47 SSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTT---APSTSS 99
>BT021470-1|AAX33618.1| 675|Drosophila melanogaster AT09010p
protein.
Length = 675
Score = 31.1 bits (67), Expect = 3.4
Identities = 23/60 (38%), Positives = 25/60 (41%)
Frame = -2
Query: 758 SPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHLQPLGWMHTQPNELPQLSPQ 579
SP P +H PP G H H P HLP HPA HL L H Q + Q Q
Sbjct: 472 SPQGPPPSVLLHPLHGPP--GGHHHHH-PLHLPTHPAALHL--LSHYHQQQQQQQQQQHQ 526
>AY069105-1|AAL39250.1| 573|Drosophila melanogaster GH12359p
protein.
Length = 573
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 714 TASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT 607
T + T+T+T+ TPA T+ S+TPAT TT
Sbjct: 225 TTTTTTTTTTTTTTTTPATTTTSTTPATTTTPKTTT 260
>AE014297-4292|AAO41611.2| 904|Drosophila melanogaster CG33204-PA
protein.
Length = 904
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 693 TSTSTSAETPAKTSRSSTPATPWMDAHTT**VAPAIASG 577
TS+S S TP+ T+ +S+ +T + HTT A A++SG
Sbjct: 692 TSSSISTTTPSNTATTSSTSTSALSNHTT-ATATALSSG 729
>AE014134-1817|ABC65890.1| 281|Drosophila melanogaster CG34043-PA
protein.
Length = 281
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -2
Query: 416 NNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM----KYGVQLGNP 249
N+ + L + Y+ L + Y + G Y GV H+ N+ YG+ L N
Sbjct: 126 NDIEWVLVADYDITDFPLEEGVESYVWKNADGENIYPGYGVIHESNLVGIISYGLPLKNK 185
Query: 248 REFYHEVHRPAHF 210
RE EV RP F
Sbjct: 186 RESNLEVRRPNRF 198
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,102,072
Number of Sequences: 53049
Number of extensions: 961185
Number of successful extensions: 3374
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3352
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6947228805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -