BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cesb0094 (1287 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (spli... 355 4e-98 Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 34 0.25 Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.8 Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical pr... 30 3.1 U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase... 29 7.1 AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinas... 29 7.1 U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 29 9.4 U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 29 9.4 >L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (splicing factor) relatedprotein 8 protein. Length = 2329 Score = 355 bits (873), Expect = 4e-98 Identities = 156/225 (69%), Positives = 179/225 (79%) Frame = -2 Query: 815 KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636 K +TI LR QIA ++YG SP DNP +E+ C VL PQ G+HQQV+LP LP H L Sbjct: 2106 KFITISDLRTQIAGFMYGVSPPDNPQVKEIRCIVLVPQTGSHQQVNLPTQLPDHELLRDF 2165 Query: 635 QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456 +PLGWMHTQPNELPQLSPQD+TTHAK+++DN SWDGEKT++ITCSFTPGS SLTAYKLTP Sbjct: 2166 EPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSVSLTAYKLTP 2225 Query: 455 SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276 SGYEWG NTD+GNNPKGY+P+HYE+VQMLLSDRFLGYFMVPS G WNYNF G R P M Sbjct: 2226 SGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAM 2285 Query: 275 KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 141 K+ V L NP+E+YHE HRP HF NF A +D T +ADRED FA Sbjct: 2286 KFDVCLSNPKEYYHEDHRPVHFHNFKAFDDPLG-TGSADREDAFA 2329 >Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical protein F58A4.1 protein. Length = 254 Score = 33.9 bits (74), Expect = 0.25 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = -1 Query: 711 ASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT 607 +SP TSTSTS T TSRS++ TP + TT Sbjct: 95 SSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTT 129 >Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical protein C30H6.11 protein. Length = 460 Score = 31.1 bits (67), Expect = 1.8 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -1 Query: 714 TASPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT 607 T +P T+T T+ TPA T+ +T TP TT Sbjct: 231 TTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTT 266 >Z81544-6|CAI46607.1| 376|Caenorhabditis elegans Hypothetical protein F49C5.9 protein. Length = 376 Score = 30.3 bits (65), Expect = 3.1 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +1 Query: 430 FLTPHSYPLGVSLYAVREHEPGVNEQVMIIVFSPSHD-ELSDMILACVVIS 579 FL ++PL A+ + EP + +I+ SP+H +S + CV+IS Sbjct: 275 FLIYFAFPLAAFTKALHDVEPFLGNWTFLIIMSPAHFLGISLSVTYCVIIS 325 >U37429-16|AAA79341.1| 597|Caenorhabditis elegans Protein kinase c protein 3 protein. Length = 597 Score = 29.1 bits (62), Expect = 7.1 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -2 Query: 662 PKHPALAHLQPLGWM-HTQPNELPQLSPQDITTHAKIMSDNSSWDG 528 P HPA+ + L H +ELPQLSP + A+I D S +DG Sbjct: 539 PYHPAVESDRDLTHFDHQFTDELPQLSPDNPDVIARI--DQSEFDG 582 >AF025666-1|AAB88885.1| 597|Caenorhabditis elegans protein kinase C3 protein. Length = 597 Score = 29.1 bits (62), Expect = 7.1 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -2 Query: 662 PKHPALAHLQPLGWM-HTQPNELPQLSPQDITTHAKIMSDNSSWDG 528 P HPA+ + L H +ELPQLSP + A+I D S +DG Sbjct: 539 PYHPAVESDRDLTHFDHQFTDELPQLSPDNPDVIARI--DQSEFDG 582 >U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (unfertilizable) protein1 protein. Length = 551 Score = 28.7 bits (61), Expect = 9.4 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -3 Query: 733 VKCTVRYCLPSGAHINKYICRNTCQNIPL*HTCNPLDGC 617 +KC+ + CL G H N Y+C + + + C+P C Sbjct: 491 LKCSCQECL--GVHSNTYMCNESNRCLKRDEVCSPYSMC 527 >U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical protein K06A1.3 protein. Length = 488 Score = 28.7 bits (61), Expect = 9.4 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 714 TASPVGHTSTSTSAETPAKTS-RSSTPATPWMDAHTT 607 T S TST+T+ ETP T+ R +T T +D TT Sbjct: 305 TTSTTTTTSTTTATETPTTTTERPTTTVTQVLDPTTT 341 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,054,740 Number of Sequences: 27780 Number of extensions: 470593 Number of successful extensions: 1478 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1317 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1466 length of database: 12,740,198 effective HSP length: 83 effective length of database: 10,434,458 effective search space used: 3599888010 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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