BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cesb0094 (1287 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g80070.1 68414.m09373 splicing factor, putative strong simila... 338 4e-93 At4g38780.1 68417.m05491 splicing factor, putative strong simila... 319 2e-87 At3g03470.1 68416.m00345 cytochrome P450, putative similar to cy... 31 2.2 At1g48790.1 68414.m05460 mov34 family protein similar to AMSH [H... 31 2.2 At1g10600.1 68414.m01200 mov34 family protein similar to AMSH [H... 30 3.8 At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 29 5.0 At1g64940.1 68414.m07361 cytochrome P450, putative similar to cy... 29 6.6 At1g64950.1 68414.m07362 cytochrome P450, putative similar to cy... 29 8.7 At1g15780.1 68414.m01893 expressed protein 29 8.7 >At1g80070.1 68414.m09373 splicing factor, putative strong similarity to splicing factor Prp8 [Homo sapiens] GI:3661610; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family Length = 2382 Score = 338 bits (831), Expect = 4e-93 Identities = 143/224 (63%), Positives = 174/224 (77%) Frame = -2 Query: 815 KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636 K + + LR QIA YLYG SP DNP +E+ C V+ PQWG HQ VHLP LP+H L L Sbjct: 2160 KFICVADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQWGNHQLVHLPSSLPEHDFLNDL 2219 Query: 635 QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456 +PLGW+HTQPNELPQLSPQD+T+H++I+ +N WDGEK II+TCSFTPGSCSLT+YKLT Sbjct: 2220 EPLGWLHTQPNELPQLSPQDVTSHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQ 2279 Query: 455 SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276 +GYEWG N D G+NP GYLP+HYE+VQMLLSDRFLG++MVP G WNY+F GV+H +M Sbjct: 2280 TGYEWGRLNKDNGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPESGPWNYSFTGVKHTLSM 2339 Query: 275 KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLF 144 KY V+LG+P+EFYHE HRP HF+ F+ ME+ A DRED F Sbjct: 2340 KYSVKLGSPKEFYHEEHRPTHFLEFSNMEE--ADITEGDREDTF 2381 >At4g38780.1 68417.m05491 splicing factor, putative strong similarity to splicing factor Prp8 [Homo sapiens] GI:3661610; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family Length = 2332 Score = 319 bits (784), Expect = 2e-87 Identities = 136/225 (60%), Positives = 166/225 (73%) Frame = -2 Query: 815 KXVTIXXLRAQIACYLYGTSPSDNPMXREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHL 636 K + I LR QIA YLYG SP DNP +E+ C V+ PQ G HQQV LP LP+H L L Sbjct: 2112 KFICIADLRTQIAGYLYGISPPDNPQVKEIRCVVMVPQCGNHQQVQLPSSLPEHQFLDDL 2171 Query: 635 QPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTP 456 +PLGW+HTQPNELPQLSPQD+T H +++ +N WD EK II+TCSFTPGSCSLT+YKLT Sbjct: 2172 EPLGWIHTQPNELPQLSPQDVTFHTRVLENNKQWDAEKCIILTCSFTPGSCSLTSYKLTQ 2231 Query: 455 SGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276 +GYEWG N D G+NP GYLP+HYE+VQMLLSDRF G++MVP G WNYNFMG H ++ Sbjct: 2232 AGYEWGRLNKDTGSNPHGYLPTHYEKVQMLLSDRFFGFYMVPENGPWNYNFMGANHTVSI 2291 Query: 275 KYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 141 Y + LG P+E+YH+VHRP HF+ F+ ME+ DR+D FA Sbjct: 2292 NYSLTLGTPKEYYHQVHRPTHFLQFSKMEEDG----DLDRDDSFA 2332 >At3g03470.1 68416.m00345 cytochrome P450, putative similar to cytochrome P450 89A2 GB:Q42602 [Arabidopsis thaliana] Length = 511 Score = 30.7 bits (66), Expect = 2.2 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -2 Query: 395 PSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM 276 P HY + D LG F++P QG+ N+ + DP + Sbjct: 374 PGHYLSYHKVTHDTVLGGFLIPRQGTINFMVGEMGRDPKI 413 >At1g48790.1 68414.m05460 mov34 family protein similar to AMSH [Homo sapiens] GI:4098124; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family Length = 507 Score = 30.7 bits (66), Expect = 2.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 638 LQPLGWMHTQPNELPQLSPQDITTH 564 L PLGW+HT P + +S D+ TH Sbjct: 404 LFPLGWIHTHPTQSCFMSSIDVHTH 428 >At1g10600.1 68414.m01200 mov34 family protein similar to AMSH [Homo sapiens] GI:4098124; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family Length = 271 Score = 29.9 bits (64), Expect = 3.8 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 Query: 638 LQPLGWMHTQPNELPQLSPQDITTH 564 L P+GW+HT P++ +S D+ TH Sbjct: 120 LYPVGWIHTHPSQGCFMSSVDLHTH 144 >At3g11030.1 68416.m01331 expressed protein contains Pfam domain PF03005: Arabidopsis proteins of unknown function Length = 451 Score = 29.5 bits (63), Expect = 5.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 125 SIFHCVSLYVVIEKKDPRPPNSCSPGDPLVLERPPP 18 +I H ++ VV+++ P PP S P P PPP Sbjct: 50 TIVHQSAIVVVVDEPPPPPPTSPPPPSPPPPSPPPP 85 >At1g64940.1 68414.m07361 cytochrome P450, putative similar to cytochrome p450 GI:438242 from [Solanum melongena] Length = 511 Score = 29.1 bits (62), Expect = 6.6 Identities = 14/55 (25%), Positives = 22/55 (40%) Frame = -2 Query: 395 PSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHE 231 P H+ + D LG + VP +G+ N+ + DP + P F E Sbjct: 378 PGHFVLPHSVTEDTVLGGYKVPKKGTINFMVAEIGRDPKVWEEPMAFKPERFMEE 432 >At1g64950.1 68414.m07362 cytochrome P450, putative similar to cytochrome P450 89A2 (CYPLXXXIX) (SP:Q42602) [Arabidopsis thaliana];similar to cytochrome P450 (GI:438242) [Solanum melongena] Length = 510 Score = 28.7 bits (61), Expect = 8.7 Identities = 14/55 (25%), Positives = 21/55 (38%) Frame = -2 Query: 395 PSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHE 231 P H+ + D LG + VP G+ N+ + DP + P F E Sbjct: 377 PGHFVLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPKVWEEPMAFKPERFMEE 431 >At1g15780.1 68414.m01893 expressed protein Length = 1335 Score = 28.7 bits (61), Expect = 8.7 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = -2 Query: 710 PPQWGTHQQVHLPKHLPKHPALAHLQPLGWMHTQPNELPQLSPQDITTHAKIMSDNSS 537 P Q + QQ +P + P+ + PL +HT PQLS Q TT + + SS Sbjct: 267 PNQLHSSQQPGVPTSATQ-PSTVNSAPLQGLHTNQQSSPQLSSQQ-TTQSMLRQHQSS 322 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,586,363 Number of Sequences: 28952 Number of extensions: 420806 Number of successful extensions: 1207 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1066 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1198 length of database: 12,070,560 effective HSP length: 83 effective length of database: 9,667,544 effective search space used: 3335302680 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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